RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Cd209bQ8CJ91 325 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 HdlbpQ8VDJ3 1268 aaKnown RBP8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Krt84Q99M73 603 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 DonsonQ9QXP4 560 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Dctpp1Q9QY93 170 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Gm36210A0A1B0GS00 229 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 A0A1W2P7S8 802 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Gm10134F6ZQC6 126 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Usp53P15975 1069 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Klra1P20937 262 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 ErmnQ5EBJ4 281 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Cdc5lQ6A068 802 aaKnown RBP8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Usp50Q6P8X6 390 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Cep120Q7TSG1 988 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Asnsd1Q8BFS9 627 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Iqcb1Q8BP00 598 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Klhl30Q8C3F7 581 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Q8C6G1 249 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Epc1Q8C9X6 813 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Pcdhb22Q91XZ8 794 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Myo3bQ1EG27 1305 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Col11a2Q64739 1736 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Scn11aQ9R053 1765 aa8.15□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Tbc1d2B1AVH7 922 aa8.15□□□□□ -1.11
Clrn1-202ENSMUST00000055636 NefhP19246 1090 aa8.15□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Ovgp1Q62010 721 aa8.15□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Drc7Q6V3W6 876 aa8.15□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Brd3Q8K2F0 726 aaKnown RBP8.15□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Nup133Q8R0G9 1155 aa8.15□□□□□ -1.11
Clrn1-202ENSMUST00000055636 MlphQ91V27 590 aa8.15□□□□□ -1.11
Clrn1-202ENSMUST00000055636 St5Q924W7 1134 aa8.15□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Pik3ap1Q9EQ32 811 aa8.15□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Wdr19Q3UGF1 1341 aa8.15□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Calcoco2A2A6M5 331 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Arid4aF8VPQ2 1261 aaKnown RBP8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Lrrc6O88978 473 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Terf1P70371 421 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Aak1Q3UHJ0 959 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 PsdQ5DTT2 1024 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Prpf4bQ61136 1007 aaKnown RBP8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Atp1a2Q6PIE5 1020 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Recql4Q75NR7 1216 aaKnown RBP8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Zc3h6Q8BYK8 1177 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Znf428Q8C1M2 176 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Rassf4Q8CB96 322 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Bola3Q8CEI1 110 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Dynll2Q9D0M5 89 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Cxcl11Q9JHH5 100 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Adgra3Q7TT36 1310 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Znf638Q61464 1960 aaKnown RBP8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Aknad1E9Q8N6 675 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Gm5624F6ZZG8 207 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Dnm1P39053 867 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 TbcaP48428 108 aaKnown RBP8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Fnbp4Q6ZQ03 1031 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Pramel6Q810Y9 485 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Ranbp6Q8BIV3 1105 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Haus7Q8BKT8 364 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Strip1Q8C079 837 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Ccdc38Q8CDN8 563 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Kcnj14Q8JZN3 434 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Tc2nQ91XT6 489 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Cdca7Q9D0M2 382 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Myo1cQ9WTI7 1063 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Med23Q80YQ2 1367 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Dhx8A2A4P0 1244 aaKnown RBP8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Cd3dP04235 173 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Mdh1P14152 334 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Grin1P35438 938 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 GscQ02591 256 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Arhgef16Q3U5C8 713 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Glg1Q61543 1175 aaKnown RBP8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Ctr9Q62018 1173 aaKnown RBP8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Fhod1Q6P9Q4 1197 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Ccdc57Q6PHN1 1016 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Bicdl2Q8CHW5 507 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Sirt2Q8VDQ8 389 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 PdclQ9DBX2 301 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Cbx8Q9QXV1 362 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Slfn1Q9Z0I7 337 aa8.14□□□□□ -1.11
Clrn1-202ENSMUST00000055636 CpdO89001 1377 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 A0A1L1SQF0 893 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Exoc3l2D3YUP5 789 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Gm20425E9Q035 978 aaKnown RBP8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Casp12O08736 419 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Hap1O35668 628 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Myo1aO88329 1043 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 SrprbP47758 269 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Psd3Q2PFD7 1037 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Q3TYL0 343 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Ankrd40Q5SUE8 363 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 TxlnaQ6PAM1 554 aaKnown RBP8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Olfr118Q7TRJ6 321 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Necab1Q8BG18 352 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Stn1Q8K2X3 378 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Ccdc12Q8R344 166 aaKnown RBP8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Tubgcp2Q921G8 905 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Ssr1Q9CY50 286 aaKnown RBP8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 MicalclQ9D5U9 680 aa8.13□□□□□ -1.11
Clrn1-202ENSMUST00000055636 Klf15Q9EPW2 415 aa8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms