RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Atp6v0a2P15920 856 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 GalcP54818 684 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Appl2Q8K3G9 662 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Pus3Q9JI38 481 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Eepd1Q3TGW2 569 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Cxcl11Q9JHH5 100 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Clic4Q9QYB1 253 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Snd1Q78PY7 910 aaKnown RBP20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Q8BZJ8 459 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 NkapQ9D0F4 415 aaKnown RBP20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Camsap3Q80VC9 1252 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 4921504E06RikQ8CET2 560 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Knl1Q66JQ7 1612 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Adgrb3Q80ZF8 1522 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Arhgef10lA2AWP8 1280 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Zscan25B2RX31 543 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Gm44503E9PYU5 387 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 L1td1Q587J6 782 aaKnown RBP20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Clca2Q8BG22 942 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Tsnaxip1Q99P25 704 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Pcdh10E9PXQ7 1057 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Ftl1P29391 183 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Nf2P46662 596 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Spa17Q62252 149 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Trmt112Q9DCG9 125 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Suclg2Q9Z2I8 433 aa20.43■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Kctd1Q5M956 257 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Xpo4Q9ESJ0 1151 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Tubb4aQ9D6F9 444 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Paip2Q9D6V8 124 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Cyp3a57D3YYZ0 503 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Ankrd35E9Q9D8 996 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 MybP06876 636 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Dnm2P39054 870 aaKnown RBP20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Rbm15bQ6PHZ5 887 aaKnown RBP20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Nek5Q7TSC3 627 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Slc27a1Q60714 646 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 GnptabQ69ZN6 1235 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 GlyctkQ8QZY2 523 aa20.42■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Lamc1P02468 1607 aaKnown RBP20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 ErmnQ5EBJ4 281 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 AsnsQ61024 561 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 KhnynQ80U38 671 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Tex19.1Q99MV2 351 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 StambpQ9CQ26 424 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Ehd4Q9EQP2 541 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Plcb3P51432 1234 aaKnown RBP20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Zfp781Q0P5U5 243 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Acsl3Q9CZW4 720 aaKnown RBP20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Nacc1Q7TSZ8 514 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Tmem191cQ9JJB1 302 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Plcb1Q9Z1B3 1216 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Clrn2B2RVW2 232 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Esr2O08537 530 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Ces3aQ63880 571 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Zscan22Q8BGS5 496 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Ces3bQ8VCU1 571 aa20.41■□□□□ 0.86
Scaf11-201ENSMUST00000047835 NpeppsQ11011 920 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Tex35Q14BK3 207 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Clic6Q8BHB9 596 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Maip1Q8BHE8 291 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Lztfl1Q9JHQ5 299 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Gsta4P24472 222 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Map3k11Q80XI6 850 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Tmem87aQ8BXN9 555 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Kdm8Q9CXT6 414 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 A0A1W2P6Q8 802 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Gm9048A0A1W2P7H4 802 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 A0A1W2P7Z8 802 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Gm9046A0A1W2P855 802 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Scyl2Q8CFE4 930 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Gm3409A0A0G2JE67 319 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Acap3Q6NXL5 833 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Znf526Q8BI66 675 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Pym1Q8CHP5 203 aaKnown RBP20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Dynll2Q9D0M5 89 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Ccdc121E9Q6D3 323 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Cd3dP04235 173 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 GabrdP22933 449 aa20.4■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Usp53P15975 1069 aa20.39■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Cfap57Q9D180 1249 aa20.39■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Saal1Q9D2C2 474 aa20.39■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Fmnl3Q6ZPF4 1028 aa20.39■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Sos2Q02384 1333 aa20.39■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Apol7aB2RT54 418 aa20.39■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Atp1a2Q6PIE5 1020 aa20.39■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Akt1s1Q9D1F4 257 aa20.39■□□□□ 0.85
Scaf11-201ENSMUST00000047835 IcoslgQ9JHJ8 322 aa20.39■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Stk32bQ9JJX8 414 aa20.39■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Mex3cQ05A36 652 aaKnown RBP20.39■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Trappc10Q3TLI0 1259 aa20.39■□□□□ 0.85
Scaf11-201ENSMUST00000047835 RabggtaQ9JHK4 567 aa20.39■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Gm11985A0A1B0GS61 206 aa20.38■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Bpifb4A2BGH0 617 aa20.38■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Gimd1E9PW74 217 aa20.38■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Krt19P19001 403 aa20.38■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Tor4aQ8BH02 426 aa20.38■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Tbc1d23Q8K0F1 684 aa20.38■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Rsph10bE9PYQ0 876 aa20.38■□□□□ 0.85
Scaf11-201ENSMUST00000047835 Traf5P70191 558 aa20.38■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms