RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Fam160b2Q80YR2 744 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Dzip1Q8BMD2 852 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Hook3Q8BUK6 718 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Eif2b5Q8CHW4 717 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Kcnq3Q8K3F6 873 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gpr108Q91WD0 569 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ttc30a1Q99J38 664 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Efcab2Q9CQ46 164 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ttc30bQ9CY00 664 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Fam213aQ9CYH2 218 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Zfp213E9QAW0 468 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Grin1P35438 938 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Hnrnph2P70333 449 aaKnown RBP9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 ItgadQ3V0T4 1168 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tsr1Q5SWD9 803 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 LnpkQ7TQ95 425 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gps2Q921N8 327 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ferd3lQ923Z4 168 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gigyf1Q99MR1 1044 aaKnown RBP9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Mfap3lQ9D3X9 409 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 ErmapQ9JLN5 566 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gli3Q61602 1583 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Kdm3aQ6PCM1 1323 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Rgs22G3UYX5 1258 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 AK157302I3ITR1 129 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gm3415J3QMS8 315 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 CebpaP53566 359 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 LbrQ3U9G9 626 aaKnown RBP9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Cyp7b1Q60991 507 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Exoc8Q6PGF7 716 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Slitrk3Q810B9 980 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ranbp6Q8BIV3 1105 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ttc19Q8CC21 365 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 KynuQ9CXF0 464 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tube1Q9D6T1 475 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Isca1Q9D924 129 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ehd4Q9EQP2 541 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Plagl1Q9JLQ4 704 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Fam50bQ9WTJ8 334 aa9.29□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tex13c2A0A0G2JGA3 530 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 A0A1W2P6Q8 802 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gm9048A0A1W2P7H4 802 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 A0A1W2P7S8 802 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 A0A1W2P7Z8 802 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gm9046A0A1W2P855 802 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gm10134F6ZQC6 126 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Zmym1Q3TJB1 983 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Cdc5lQ6A068 802 aaKnown RBP9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Larp6Q8BN59 492 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Pex19Q8VCI5 299 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Pcdha7Q91Y13 937 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Vps16Q920Q4 839 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Fut8Q9WTS2 575 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Myh7bA2AQP0 1941 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Naaladl2A0A0N4SUJ3 795 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Pcdhb9E9Q5G2 828 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 CrklP47941 303 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tsga10Q6NY15 697 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Sval3Q76I99 144 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gpt2Q8BGT5 522 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 VmacQ8BP01 174 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ncoa5Q91W39 579 aaKnown RBP9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tlr9Q9EQU3 1032 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Rcan1Q9JHG6 198 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ecel1Q9JMI0 775 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Med23Q80YQ2 1367 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Mrps31Q61733 384 aaKnown RBP9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Acap3Q6NXL5 833 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Clic6Q8BHB9 596 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 4930572O03RikQ8C5Y0 211 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Kcnj14Q8JZN3 434 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tcp11l2Q8K1H7 517 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Rnf112Q96DY5 654 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ribc1Q9D0B8 379 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Arpc5lQ9D898 153 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Capn15Q9JLG8 1095 aa9.28□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Rps6ka3P18654 740 aaKnown RBP9.27□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Pbx1P41778 430 aa9.27□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Rassf10Q8BL43 508 aa9.27□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Eif3bQ8JZQ9 803 aaKnown RBP9.27□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tspyl4Q8VD63 406 aa9.27□□□□□ -0.92
Cdc40-201ENSMUST00000044166 ZgpatQ8VDM1 511 aa9.27□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tab2Q99K90 693 aa9.27□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Coro7Q9D2V7 922 aa9.27□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Egfl6Q9JJZ5 550 aa9.27□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Uso1Q9Z1Z0 959 aaKnown RBP9.27□□□□□ -0.92
Cdc40-201ENSMUST00000044166 FocadA2AKG8 1798 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Lmtk3Q5XJV6 1424 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tns2Q8CGB6 1400 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 VeztQ3ZK22 780 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cct6bQ61390 531 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Myl10Q62082 202 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cep128Q8BI22 1102 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Zfp446Q8C9M8 523 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Matr3Q8K310 846 aaKnown RBP9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Uap1Q91YN5 522 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ssfa2Q922B9 1252 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ltb4r2Q9JJL9 360 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Sipa1l2Q80TE4 1722 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gm1979E9QAN3 267 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms