RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Glra4Q61603 456 aa26.44■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Mknk2Q8CDB0 459 aa26.44■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Mei1Q9D4I2 1268 aa26.44■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Ppil2Q9D787 521 aa26.44■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Rbm19Q8R3C6 952 aaKnown RBP26.43■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Stk39Q9Z1W9 556 aa26.43■■□□□ 1.82
Upf3a-201ENSMUST00000043767 CebpaP53566 359 aa26.43■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Kif1bpQ6ZPU9 617 aa26.43■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Ccp110Q7TSH4 1004 aa26.43■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Lrrc15Q80X72 579 aa26.43■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Rbm28Q8CGC6 750 aaKnown RBP26.43■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Tut1Q8R3F9 869 aa26.43■■□□□ 1.82
Upf3a-201ENSMUST00000043767 TicrrQ8BQ33 1889 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Mical3Q8CJ19 1993 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Dcdc2bF7BCK0 340 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Myo1bP46735 1107 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Ncf1Q09014 390 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Wdr93Q402B2 695 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Brip1Q5SXJ3 1174 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Myh14Q6URW6 2000 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Ccdc173A0JLY1 547 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Acnat2Q8BGG9 420 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Triml1Q8BVP1 470 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Txnrd2Q9JLT4 524 aa26.42■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Ppp2r5bQ6PD28 497 aa26.41■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Epha10Q8BYG9 1007 aa26.41■■□□□ 1.82
Upf3a-201ENSMUST00000043767 NyxP83503 476 aa26.4■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Mdh1bQ5F204 500 aa26.4■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Glis2Q8VDL9 521 aa26.4■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Ppef2O35385 757 aa26.4■■□□□ 1.82
Upf3a-201ENSMUST00000043767 NrapQ80XB4 1728 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Fam184aE9PW83 1143 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Dnm1P39053 867 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Qrich1Q3UA37 777 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Lgr6Q3UVD5 967 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Oog3Q3UWY1 500 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Ift74Q8BKE9 600 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 E4f1Q8CCE9 783 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Pnma3Q8JZW8 466 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Ascc2Q91WR3 749 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Cdc45Q9Z1X9 566 aa26.39■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Cfap99A0A140LIX9 648 aa26.38■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Lman1lQ8VCD3 505 aa26.38■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Cnnm3Q32NY4 713 aa26.38■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Eme2Q56A04 373 aa26.38■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Psen2Q61144 448 aa26.38■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Anp32cQ64G17 123 aa26.38■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Kcnj14Q8JZN3 434 aa26.38■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Tomm22Q9CPQ3 142 aa26.38■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Ccdc88aQ5SNZ0 1873 aa26.38■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Zscan20B2KFW1 1030 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Sept2P42208 361 aaKnown RBP26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Ttll1Q91V51 423 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Nop2Q922K7 793 aaKnown RBP26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Gpaa1Q9WTK3 621 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Tbc1d8bA3KGB4 1114 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Cd22P35329 862 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Mindy4Q3UQI9 744 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Cnot7Q60809 285 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Rasgrp4Q8BTM9 673 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Apbb1ipQ8R5A3 670 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Eif4enif1Q9EST3 983 aaKnown RBP26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Tob2Q9JM55 345 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Col2a1P28481 1487 aa26.37■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Nova2D3YVV7 556 aaKnown RBP26.36■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Ube2oQ6ZPJ3 1288 aa26.36■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Plcd3Q8K2J0 785 aa26.36■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Srgap1Q91Z69 1062 aa26.36■■□□□ 1.81
Upf3a-201ENSMUST00000043767 SrrtQ99MR6 875 aaKnown RBP26.36■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Etnk1Q9D4V0 363 aa26.36■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Tspoap1Q7TNF8 1846 aa26.36■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Atrnl1Q6A051 1378 aa26.36■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Pdia4P08003 638 aaKnown RBP26.35■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Mybl2P48972 704 aa26.35■■□□□ 1.81
Upf3a-201ENSMUST00000043767 MycbpapQ5SUV2 932 aa26.35■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Nap1l3Q794H2 544 aa26.35■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Calhm4Q8CE93 315 aa26.35■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Inpp5bQ8K337 993 aa26.35■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Prpf3Q922U1 683 aaKnown RBP26.35■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Pitpnm2Q6ZPQ6 1335 aa26.35■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Myo19Q5SV80 963 aa26.35■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Esyt1Q3U7R1 1092 aaKnown RBP26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Gzf1Q4VBD9 706 aa26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 WaplQ65Z40 1200 aaKnown RBP26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Rnf214Q8BFU3 668 aaKnown RBP26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Nfil3O08750 462 aa26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Lnx1O70263 728 aa26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Pank2Q3U4S0 443 aa26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Slc27a1Q60714 646 aa26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Plcd1Q8R3B1 756 aa26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Wasf1Q8R5H6 559 aa26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Gbp7Q91Z40 638 aa26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Tfcp2Q9ERA0 502 aa26.34■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Myh8P13542 1937 aa26.33■■□□□ 1.81
Upf3a-201ENSMUST00000043767 CgnP59242 1191 aa26.33■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Armc2Q3URY6 854 aa26.33■■□□□ 1.81
Upf3a-201ENSMUST00000043767 RadxQ8C779 850 aa26.33■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Igsf9bE9PZ19 1328 aa26.33■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Atp8b3Q6UQ17 1335 aa26.33■■□□□ 1.81
Upf3a-201ENSMUST00000043767 Gm30191A0A0U1RNT7 187 aa26.32■■□□□ 1.8
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms