RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Tmem179Q8BHH9 233 aa8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ubxn2aQ99KJ0 258 aa8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 Med10Q9CXU0 135 aa8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ccdc70Q9D9B0 223 aa8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 Egfl6Q9JJZ5 550 aa8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 Itgb1bp2Q9R000 350 aa8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ahdc1Q6PAL7 1594 aaKnown RBP8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 PpardP35396 440 aa8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 Krt9Q6RHW0 743 aa8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 VmacQ8BP01 174 aa8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 Trpc3Q9QZC1 836 aa8.35□□□□□ -1.07
Usp40-201ENSMUST00000040783 Arhgap4B1AUY3 965 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ankrd13aQ80UP5 588 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 QarsQ8BML9 775 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Kcnj14Q8JZN3 434 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ccdc12Q8R344 166 aaKnown RBP8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tubgcp6G5E8P0 1769 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ccdc170D3YXL0 722 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Cetn3O35648 167 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Mcm6P97311 821 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Mphosph8Q3TYA6 858 aaKnown RBP8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tmed8Q3UHI4 326 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Sgsm2Q80U12 1005 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 McamQ8R2Y2 648 aaKnown RBP8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Rfc4Q99J62 364 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Rreb1Q3UH06 1700 aaKnown RBP8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Med23Q80YQ2 1367 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Arhgef10lA2AWP8 1280 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Hspa2P17156 633 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Senp1P59110 640 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 MarsQ68FL6 902 aaKnown RBP8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Herc4Q6PAV2 1057 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Pde5aQ8CG03 865 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tbc1d23Q8K0F1 684 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Dip2aQ8BWT5 1523 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Cdc42bpaQ3UU96 1719 aa8.34□□□□□ -1.07
Usp40-201ENSMUST00000040783 Copb2O55029 905 aa8.34□□□□□ -1.08
Usp40-201ENSMUST00000040783 Il7P10168 154 aa8.34□□□□□ -1.08
Usp40-201ENSMUST00000040783 Foxp1P58462 705 aa8.34□□□□□ -1.08
Usp40-201ENSMUST00000040783 Dcaf15Q6PFH3 600 aa8.34□□□□□ -1.08
Usp40-201ENSMUST00000040783 Slc7a6osQ7TPE5 306 aa8.34□□□□□ -1.08
Usp40-201ENSMUST00000040783 Mcur1Q9CXD6 340 aa8.34□□□□□ -1.08
Usp40-201ENSMUST00000040783 Dnajc21E9Q8D0 531 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Cyp26a1O55127 497 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Slc10a4Q3UEZ8 437 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ccpg1Q640L3 753 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Mtss1lQ6P9S0 715 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Rbm42Q91V81 474 aaKnown RBP8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Polr2dQ9D7M8 142 aaKnown RBP8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Osbpl5Q9ER64 874 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Atp12aQ9Z1W8 1035 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Flt1P35969 1333 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Rapgef1Q3UHC1 1224 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Tfcp2l1Q3UNW5 479 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 MaeaQ4VC33 396 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Sh3gl3Q62421 347 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 WaplQ65Z40 1200 aaKnown RBP8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Camsap3Q80VC9 1252 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Atad2Q8CDM1 1040 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Nod2Q8K3Z0 1020 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Cabp7Q91ZM8 215 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Cst12Q9DAN8 128 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Col4a3bpQ9EQG9 624 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Zkscan5Q9Z1D8 819 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Atp7bQ64446 1462 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Kiaa1210E9Q0C6 1637 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gm45015A0A140LII9 184 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gm18336A0A140LIU8 765 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gm9992B2RWK3 458 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Pcdhb9E9Q5G2 828 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Pdrg1P59048 133 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Unc93aQ710D3 458 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Prune1Q8BIW1 454 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Fam204aQ8C6C7 236 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 LpxnQ99N69 386 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Lrp2bpQ9D4C6 346 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Mroh6V9GX81 722 aa8.33□□□□□ -1.08
Usp40-201ENSMUST00000040783 Cyp2c68K7N6C2 491 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ube3aO08759 870 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Zbtb7aO88939 569 aaKnown RBP8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 FosP01101 380 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ptgs1P22437 602 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Sema3eP70275 775 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Nucb2P81117 420 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Lig3P97386 1015 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Vars2Q3U2A8 1060 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Hdhd2Q3UGR5 259 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Prdm4Q80V63 803 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ireb2Q811J3 963 aaKnown RBP8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Kcnv2Q8CFS6 562 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Appl2Q8K3G9 662 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Kdm4cQ8VCD7 1054 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ttll1Q91V51 423 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Basp1Q91XV3 226 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Saal1Q9D2C2 474 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Trmt112Q9DCG9 125 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Myoz2Q9JJW5 264 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Myl7Q9QVP4 175 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Setd1bQ8CFT2 1985 aa8.32□□□□□ -1.08
Usp40-201ENSMUST00000040783 Tbc1d4Q8BYJ6 1307 aa8.32□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms