RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Cep104Q80V31 926 aa25.52■■□□□ 1.68
Sh3rf1-201ENSMUST00000034060 Cplx3Q8R1B5 158 aa25.52■■□□□ 1.68
Sh3rf1-201ENSMUST00000034060 Nuf2Q99P69 463 aa25.52■■□□□ 1.68
Sh3rf1-201ENSMUST00000034060 Traf1P39428 409 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Eef1gQ9D8N0 437 aaKnown RBP25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Pacsin2Q9WVE8 486 aaKnown RBP25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Kdm3bQ6ZPY7 1562 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 ParnQ8VDG3 624 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Ophn1Q99J31 802 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Ccnt1Q9QWV9 724 aaKnown RBP25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Mroh9G5E8L9 891 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Me3Q8BMF3 604 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Dnaaf2Q8BPI1 814 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Pih1h3bQ8C6P5 218 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 FibpQ9JI19 357 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 CopeO89079 308 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Itga6Q61739 1091 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Slc7a6osQ7TPE5 306 aa25.51■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Kif5aP33175 1027 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Rint1Q8BZ36 792 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Aifm3Q3TY86 605 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Rab11fip4Q8BQP8 635 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Gm28043E0CXC2 719 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Cops6O88545 324 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Nub1P54729 614 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Slc17a8Q8BFU8 601 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 MefvQ9JJ26 767 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Foxp1P58462 705 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Cnga4Q3UW12 575 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Myo6Q64331 1265 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Ints4Q8CIM8 964 aa25.5■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Casp1P29452 402 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Gm10488Q4KL05 212 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Cacna2d2Q6PHS9 1154 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Fam133bQ9CVI2 245 aaKnown RBP25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Speer3W4VSP1 261 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Cnksr1A2A9K7 700 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Spata31d1bE9QA57 1361 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Gm16486A0A1D5RMD1 1434 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Enc1O35709 589 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 CaluO35887 315 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Hoxc9P09633 260 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 NeblQ0II04 452 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Ccdc87Q8CDL9 855 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Bst2Q8R2Q8 172 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Myl7Q9QVP4 175 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Plxnc1Q9QZC2 1574 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Stmn1P54227 149 aaKnown RBP25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Timm10P62073 90 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Mpp4Q6P7F1 635 aa25.49■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Card6E9PWH2 1175 aa25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Ppfia2Q8BSS9 1257 aa25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Stac3Q8BZ71 360 aa25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Mfap3Q922T2 349 aa25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Nlrp1aQ2LKU9 1182 aa25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Cabs1Q8C633 391 aa25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 AticQ9CWJ9 592 aaKnown RBP25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Gipc1Q9Z0G0 333 aa25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 HgsQ99LI8 775 aa25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Cep57Q8CEE0 500 aa25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Mphosph6Q9D1Q1 161 aa25.48■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Tmem94Q7TSH8 1360 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Prune1Q8BIW1 454 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Trim17Q7TPM3 477 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Bzw2Q91VK1 419 aaKnown RBP25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Fkbp3Q62446 224 aaKnown RBP25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Kcnj14Q8JZN3 434 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Smc6Q924W5 1097 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Sh3tc1G3X9F6 1346 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Bin2D3Z6Q9 489 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 1700109H08RikQ9D9C0 210 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Kifc2O08672 792 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Ift81O35594 676 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 AdkP55264 361 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 ArsiQ32KI9 573 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Ccdc68Q8BVC4 333 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Mettl5Q8K1A0 209 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Ifi35Q9D8C4 286 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Homer2Q9QWW1 354 aa25.47■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Abcc4E9Q236 1325 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Myef2Q8C854 591 aaKnown RBP25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Trim7Q923T7 510 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Tnpo2Q99LG2 887 aaKnown RBP25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Riok3Q9DBU3 519 aaKnown RBP25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Lonrf2B2RT44 518 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Ccdc92bQ5SUE3 299 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Mrps22Q9CXW2 359 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Vat1lQ80TB8 417 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Iws1Q8C1D8 766 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Fam217aQ9D9W6 419 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Apol11aE9PZG0 334 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Serpinb6eI7HJI3 429 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Gucy1b3O54865 620 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Tbc1d9bQ5SVR0 1263 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Rcn2Q8BP92 320 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Dph5Q9CWQ0 281 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Dnajc10Q9DC23 793 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 H2-OaQ9QWV1 250 aa25.46■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Dync1i2O88487 612 aaKnown RBP25.45■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Trim21Q62191 470 aa25.45■■□□□ 1.67
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms