RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Api5O35841 504 aaKnown RBP11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Tcp11Q01755 566 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Fam228bQ497Q6 232 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Eme2Q56A04 373 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 MlxiplQ99MZ3 864 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Mei1Q9D4I2 1268 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Kdm6aO70546 1401 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Lrriq3Q14DL3 633 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 CgasQ8C6L5 507 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 ApobrQ8VBT6 942 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 TkfcQ8VC30 578 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 StrbpQ91WM1 672 aaKnown RBP11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gm10378F6XQQ1 160 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Lipo1J3QME6 396 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 MarcksP26645 309 aaKnown RBP11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 SsbP32067 415 aaKnown RBP11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Rapgef1Q3UHC1 1224 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ksr1Q61097 873 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 NelfbQ8C4Y3 580 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pcdha12Q91Y18 950 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 GzmnQ920S1 248 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 GdaQ9R111 454 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gm43638A0A0J9YU36 694 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Mx1P09922 631 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 RpsaP14206 295 aaKnown RBP11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 RargP18911 458 aaKnown RBP11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pth1rP41593 591 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 HdgfP51859 237 aaKnown RBP11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Tshz1Q5DTH5 1084 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Cdc37Q61081 379 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Washc1Q8VDD8 475 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 ByslO54825 436 aaKnown RBP11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Eif4a1P60843 406 aaKnown RBP11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gucy2fQ5SDA5 1108 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Naa15Q80UM3 865 aaKnown RBP11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 RragaQ80X95 313 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Caps2Q8BUG5 550 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Suclg2Q9Z2I8 433 aa11.93□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Mybl1P51960 751 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Wdr44Q6NVE8 915 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Usp49Q6P9L4 685 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Prr18Q6PAN7 307 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Stkld1Q80YS9 662 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Zkscan8Q8BSL0 588 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Cyth1Q9QX11 398 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gm1993A6X8I0 212 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 SlxD3Z347 212 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ppfibp2O35711 882 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Sult6b1P0CC03 303 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 PparaP23204 468 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ddx10Q80Y44 875 aaKnown RBP11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ccdc40Q8BI79 1192 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Spata32Q8C5V0 334 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 TnrQ8BYI9 1358 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Vmn2r23E9PXI5 849 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Zfp213E9QAW0 468 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ice2Q3UZ18 988 aaKnown RBP11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Rasgrp4Q8BTM9 673 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 IqcdQ9D3V1 458 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Cd274Q9EP73 290 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Grin2dQ03391 1323 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Zfp853A0A1D5RM95 733 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Nfil3O08750 462 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pla2g4bP0C871 782 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Rfc1P35601 1131 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Mcur1Q9CXD6 340 aa11.92□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Tmod1P49813 359 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 G3bp2P97379 482 aaKnown RBP11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Prm3Q62100 101 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Tbc1d23Q8K0F1 684 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Setdb1O88974 1307 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Cpsf2O35218 782 aaKnown RBP11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Tbc1d2bQ3U0J8 965 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gucy2cQ3UWA6 1072 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Tab3Q571K4 716 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pde6cQ91ZQ1 861 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Letm1Q9Z2I0 738 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 1700017N19RikA0A087WPJ1 469 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ttc13A0A1L1SSC7 844 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Cyb5rlB1AS42 316 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Arhgap4B1AUY3 965 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Plekhd1B2RPU2 505 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ccdc6D3YZP9 469 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ugt1a8D3Z748 530 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ugt1a10E9PXN7 530 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gm20425E9Q035 978 aaKnown RBP11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pak1O88643 545 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Sox5P35710 763 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 SrprbP47758 269 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Tcerg1lQ3B807 590 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Tbc1d5Q80XQ2 815 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 F13a1Q8BH61 732 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Amigo3Q8C2S7 508 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Thoc1Q8R3N6 657 aaKnown RBP11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Nip7Q9CXK8 180 aaKnown RBP11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Naa16Q9DBB4 864 aa11.91□□□□□ -0.5
Rnf40-201ENSMUST00000033088 DccP70211 1447 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Robo1O89026 1612 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Mroh9G5E8L9 891 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Slc12a2P55012 1205 aa11.9□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms