RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 H2afxP27661 143 aaKnown RBP12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Usp50Q6P8X6 390 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ubxn10Q8BG34 277 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ppfibp1Q8C8U0 969 aaKnown RBP12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Kiaa0319lQ8K135 1048 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Phldb2Q8K1N2 1249 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Usp32F8VPZ3 1604 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Specc1lQ2KN98 1118 aaKnown RBP12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ctdspl2Q8BG15 465 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ccdc122Q8BVN0 290 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Sumf1Q8R0F3 372 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Hps3Q91VB4 1002 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Brms1Q99N20 246 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 CebpaP53566 359 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Kiaa1211Q5PR69 1207 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Map10Q8BJS7 891 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Sept14Q9DA97 430 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Add2Q9QYB8 725 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 AW822073A0A0N4SUK1 652 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 PparaP23204 468 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ssrp1Q08943 708 aaKnown RBP12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Haus6Q6NV99 933 aaKnown RBP12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ppp2r2cQ8BG02 447 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 HlfQ8BW74 295 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Lrit1Q8K099 624 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Paf1Q8K2T8 535 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Cul5Q9D5V5 780 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 PdclQ9DBX2 301 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Dusp10Q9ESS0 483 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Cxcl11Q9JHH5 100 aa12.22□□□□□ -0.45
Msh3-201ENSMUST00000022220 Prdm11A2AGX3 565 aa12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 Cd3dP04235 173 aa12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 Fdx1P46656 188 aa12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 Nlrp2Q4PLS0 1046 aaKnown RBP12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 Slc27a1Q60714 646 aa12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 Slc20a2Q80UP8 656 aa12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 Fam53cQ8BXQ8 393 aa12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ssr1Q9CY50 286 aaKnown RBP12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 MybP06876 636 aa12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 Pfkfb1P70266 471 aa12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 Irx5Q9JKQ4 484 aa12.21□□□□□ -0.45
Msh3-201ENSMUST00000022220 Sycp2lA0A0M3U1B0 842 aa12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 Ccdc114Q3UX62 658 aa12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 Bbof1Q3V079 533 aa12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 Dhx40Q6PE54 779 aaKnown RBP12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 Dpp8Q80YA7 892 aa12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 Epc1Q8C9X6 813 aa12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 Ints4Q8CIM8 964 aa12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 AmfrQ9R049 643 aa12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 Knop1Q9Z2Q2 478 aaKnown RBP12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 Msh6P54276 1358 aaKnown RBP12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 Myom1Q62234 1667 aaKnown RBP12.21□□□□□ -0.46
Msh3-201ENSMUST00000022220 Cacna2d4Q5RJF7 1116 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Atp2b4Q6Q477 1205 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 B4galnt4Q766D5 1034 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Ctdp1Q7TSG2 960 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Tmx4Q8C0L0 335 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Mtmr2Q9Z2D1 643 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Snapc4Q8BP86 1333 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 PpardP35396 440 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Armc2Q3URY6 854 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Ttll4Q80UG8 1193 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 QarsQ8BML9 775 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Rnf123Q5XPI3 1314 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Ano3A2AHL1 981 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Parp2O88554 559 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Cyp2d10P24456 504 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 XpcP51612 930 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Pls1Q3V0K9 630 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Edrf1Q6GQV7 1239 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Rasgrp4Q8BTM9 673 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Hdac9Q99N13 588 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Atp10bB1AWN4 1474 aa12.2□□□□□ -0.46
Msh3-201ENSMUST00000022220 Tbc1d2B1AVH7 922 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Olfr247E9PVJ7 320 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Olfr819K7N727 320 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 NfixP70257 488 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Cct5P80316 541 aaKnown RBP12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Bicdl2Q8CHW5 507 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Nop2Q922K7 793 aaKnown RBP12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Nfxl1E9Q8I7 918 aaKnown RBP12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Dnajb6O54946 365 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Rfc1P35601 1131 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Snd1Q78PY7 910 aaKnown RBP12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Pus7lQ8CE46 702 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Tada3Q8R0L9 432 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 CenphQ9QYM8 241 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Med1Q925J9 1575 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 PplQ9R269 1755 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Fam178bQ24JP3 464 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Chrna5Q2MKA5 467 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 IqcgQ80W32 419 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Hs2st1Q8R3H7 356 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 PpanQ91YU8 470 aaKnown RBP12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 NapaQ9DB05 295 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Stk39Q9Z1W9 556 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Arhgap33Q80YF9 1305 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Mdc1Q5PSV9 1707 aa12.19□□□□□ -0.46
Msh3-201ENSMUST00000022220 Mybl2P48972 704 aa12.18□□□□□ -0.46
Msh3-201ENSMUST00000022220 MmeQ61391 750 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms