RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Myl3P09542 204 aa18.67■□□□□ 0.58
Shh-201ENSMUST00000002708 Rhbdl3P58873 404 aa18.67■□□□□ 0.58
Shh-201ENSMUST00000002708 Atp1b3P97370 278 aa18.67■□□□□ 0.58
Shh-201ENSMUST00000002708 A0A0U1RNP2 1173 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 Prr16A3KMN5 304 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 IkbkbO88351 757 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 Lrrc6O88978 473 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 Mrps31Q61733 384 aaKnown RBP18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 Q8K2W9 541 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 MlphQ91V27 590 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 EvplQ9D952 2035 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 Nmt2O70311 529 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 Npy5rO70342 466 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 Adssl1P28650 457 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 Pus7lQ8CE46 702 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 PdclQ9DBX2 301 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 Ercc4Q9QZD4 917 aa18.66■□□□□ 0.58
Shh-201ENSMUST00000002708 Eva1cP58659 440 aa18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Smc1aQ9CU62 1233 aaKnown RBP18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Thap2Q9D305 217 aa18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Tktl2Q9D4D4 627 aa18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Gm13023A2A8N2 498 aa18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Rsrc2A2RTL5 376 aaKnown RBP18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Epb41l2O70318 988 aaKnown RBP18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Fam83bQ0VBM2 1012 aa18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Ggt6Q6PDE7 497 aa18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Tmco3Q8BH01 678 aa18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Gga3Q8BMI3 718 aa18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Apobec3Q99J72 440 aaKnown RBP18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Prc1Q99K43 603 aaKnown RBP18.65■□□□□ 0.58
Shh-201ENSMUST00000002708 Acad12D3Z7X0 555 aa18.64■□□□□ 0.58
Shh-201ENSMUST00000002708 Ehmt1Q5DW34 1296 aa18.64■□□□□ 0.58
Shh-201ENSMUST00000002708 Cdcp1Q5U462 833 aa18.64■□□□□ 0.58
Shh-201ENSMUST00000002708 Ctr9Q62018 1173 aaKnown RBP18.64■□□□□ 0.58
Shh-201ENSMUST00000002708 Enox1Q8BHR2 643 aaKnown RBP18.64■□□□□ 0.58
Shh-201ENSMUST00000002708 Tcp11l2Q8K1H7 517 aa18.64■□□□□ 0.58
Shh-201ENSMUST00000002708 EcsitQ9QZH6 435 aa18.64■□□□□ 0.58
Shh-201ENSMUST00000002708 SsbP32067 415 aaKnown RBP18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Sun3Q5SS91 320 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Krt23Q99PS0 422 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Ndufb9Q9CQJ8 179 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Letm1Q9Z2I0 738 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Igsf9bE9PZ19 1328 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 A0A1W2P6Q8 802 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Gm9048A0A1W2P7H4 802 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 A0A1W2P7S8 802 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 A0A1W2P7Z8 802 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Gm9046A0A1W2P855 802 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Nab2Q61127 525 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Cdc5lQ6A068 802 aaKnown RBP18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Srp68Q8BMA6 625 aaKnown RBP18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Cep85Q8BMK0 761 aa18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 McamQ8R2Y2 648 aaKnown RBP18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Sf3b3Q921M3 1217 aaKnown RBP18.64■□□□□ 0.57
Shh-201ENSMUST00000002708 Rgs22G3UYX5 1258 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Cyp3a25O09158 503 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Sox5P35710 763 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Iqcb1Q8BP00 598 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Pde5aQ8CG03 865 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Smc2Q8CG48 1191 aaKnown RBP18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 NsmfQ99NF2 532 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 SelenooQ9DBC0 667 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Tob2Q9JM55 345 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Ccdc191J3QQ27 883 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Tshz1Q5DTH5 1084 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 QarsQ8BML9 775 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Pdcd6ipQ9WU78 869 aaKnown RBP18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Cacna1sQ02789 1880 aa18.63■□□□□ 0.57
Shh-201ENSMUST00000002708 Myo1aO88329 1043 aa18.62■□□□□ 0.57
Shh-201ENSMUST00000002708 Gjb4Q02738 266 aa18.62■□□□□ 0.57
Shh-201ENSMUST00000002708 Gdap1l1Q8VE33 370 aa18.62■□□□□ 0.57
Shh-201ENSMUST00000002708 Uap1Q91YN5 522 aa18.62■□□□□ 0.57
Shh-201ENSMUST00000002708 Tubb4aQ9D6F9 444 aa18.62■□□□□ 0.57
Shh-201ENSMUST00000002708 Zcchc17Q9ESX4 241 aaKnown RBP18.62■□□□□ 0.57
Shh-201ENSMUST00000002708 Rps6ka4Q9Z2B9 773 aa18.62■□□□□ 0.57
Shh-201ENSMUST00000002708 PparaP23204 468 aa18.62■□□□□ 0.57
Shh-201ENSMUST00000002708 Traf1P39428 409 aa18.62■□□□□ 0.57
Shh-201ENSMUST00000002708 Caps2Q8BUG5 550 aa18.62■□□□□ 0.57
Shh-201ENSMUST00000002708 Gm43738A0A0G2JEA5 862 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 1700013D24RikQ0P521 120 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 Dusp9Q7TNL7 452 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 Txndc5Q91W90 417 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 Mis18aQ9CZJ6 204 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 A0A1L1SQF0 893 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 Ugt1a8D3Z748 530 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 Ugt1a10E9PXN7 530 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 Vps33bP59016 617 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 MycbpapQ5SUV2 932 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 Ift88Q61371 824 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 HlfQ8BW74 295 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 Lrrd1Q8C0R9 853 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 MicalclQ9D5U9 680 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 Myh13B1AR69 1938 aa18.61■□□□□ 0.57
Shh-201ENSMUST00000002708 Dhx8A2A4P0 1244 aaKnown RBP18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 PcQ05920 1178 aa18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 ItpripQ3TNL8 555 aa18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 Ccdc34Q3UI66 367 aa18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 Gucy2cQ3UWA6 1072 aa18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 Rbbp6P97868 1790 aaKnown RBP18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 Usp50Q6P8X6 390 aa18.6■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms