RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Gm3880A0A1B0GSB3 72 aa7,43□□□□□ -1,22
Pcf11-204ENSMUST00000208058 Gm2431E9Q8S1 172 aa7,43□□□□□ -1,22
Pcf11-204ENSMUST00000208058 Gm10272F7CZ33 110 aa7,41□□□□□ -1,22
Pcf11-204ENSMUST00000208058 H2al1kJ3QP08 105 aa7,37□□□□□ -1,23
Pcf11-204ENSMUST00000208058 Krtap7-1Q9D3I6 87 aa7,35□□□□□ -1,23
Pcf11-204ENSMUST00000208058 Gm45337A0A1B0GS71 263 aa7,33□□□□□ -1,24
Pcf11-204ENSMUST00000208058 H2al1mQ9DAD9 105 aa7,29□□□□□ -1,24
Pcf11-204ENSMUST00000208058 Lce1fB9EJP6 147 aa7,27□□□□□ -1,25
Pcf11-204ENSMUST00000208058 Lce1cQ9D1C5 147 aa7,27□□□□□ -1,25
Pcf11-204ENSMUST00000208058 Muc19Q6PZE0 7524 aa7,27□□□□□ -1,25
Pcf11-204ENSMUST00000208058 Gpr98Q8VHN7 6298 aaKnown RBP7,17□□□□□ -1,26
Pcf11-204ENSMUST00000208058 Gm10153A0A1B0GRL1 320 aa7,11□□□□□ -1,27
Pcf11-204ENSMUST00000208058 4933415A04RikQ9D443 101 aa7,07□□□□□ -1,28
Pcf11-204ENSMUST00000208058 Hmcn1D3YXG0 5634 aa7,06□□□□□ -1,28
Pcf11-204ENSMUST00000208058 Gm40460A0A1B0GR10 244 aa7,06□□□□□ -1,28
Pcf11-204ENSMUST00000208058 Gm7579A0A1B0GRJ4 243 aa7,06□□□□□ -1,28
Pcf11-204ENSMUST00000208058 Krtap5-5Q2TA51 241 aa7,06□□□□□ -1,28
Pcf11-204ENSMUST00000208058 Krtap5-4Q62220 223 aa7,06□□□□□ -1,28
Pcf11-204ENSMUST00000208058 Ndufs5Q99LY9 106 aa7,06□□□□□ -1,28
Pcf11-204ENSMUST00000208058 Gm12216A0A1W2P827 62 aa7,03□□□□□ -1,28
Pcf11-204ENSMUST00000208058 Gm11938Q9D3H4 131 aa7,02□□□□□ -1,29
Pcf11-204ENSMUST00000208058 Krtap19-4Q925H7 84 aa7,01□□□□□ -1,29
Pcf11-204ENSMUST00000208058 Mt1P02802 61 aaKnown RBP6,99□□□□□ -1,29
Pcf11-204ENSMUST00000208058 Gm39115A0A1B0GSH7 232 aa6,98□□□□□ -1,29
Pcf11-204ENSMUST00000208058 Sox16Q62247 57 aa6,96□□□□□ -1,3
Pcf11-204ENSMUST00000208058 DstQ91ZU6 7393 aaKnown RBP6,93□□□□□ -1,3
Pcf11-204ENSMUST00000208058 Romo1P60603 79 aa6,91□□□□□ -1,3
Pcf11-204ENSMUST00000208058 Gm3646F6S692 53 aa6,81□□□□□ -1,32
Pcf11-204ENSMUST00000208058 NebE9Q1W3 7152 aa6,72□□□□□ -1,33
Pcf11-204ENSMUST00000208058 Lce3cQ91V05 98 aa6,67□□□□□ -1,34
Pcf11-204ENSMUST00000208058 Krtap4-16Q91W93 202 aa6,62□□□□□ -1,35
Pcf11-204ENSMUST00000208058 Tnp1P10856 55 aa6,61□□□□□ -1,35
Pcf11-204ENSMUST00000208058 Gm45618A0A1B0GSA0 219 aa6,56□□□□□ -1,36
Pcf11-204ENSMUST00000208058 Lce3dE9Q8V1 98 aa6,56□□□□□ -1,36
Pcf11-204ENSMUST00000208058 Pcp4P63054 62 aa6,54□□□□□ -1,36
Pcf11-204ENSMUST00000208058 Mt3P28184 68 aa6,46□□□□□ -1,38
Pcf11-204ENSMUST00000208058 Sprr2fO70557 76 aa6,45□□□□□ -1,38
Pcf11-204ENSMUST00000208058 ObscnA2AAJ9 8891 aaKnown RBP6,43□□□□□ -1,38
Pcf11-204ENSMUST00000208058 Gm10337F7DEP7 55 aa6,38□□□□□ -1,39
Pcf11-204ENSMUST00000208058 AhnakE9Q616 5656 aaKnown RBP6,38□□□□□ -1,39
Pcf11-204ENSMUST00000208058 Lce3eF8VQJ0 98 aa6,33□□□□□ -1,4
Pcf11-204ENSMUST00000208058 Lce3fQ6PAI4 98 aa6,33□□□□□ -1,4
Pcf11-204ENSMUST00000208058 Gm40193A0A1B0GT39 78 aa6,28□□□□□ -1,4
Pcf11-204ENSMUST00000208058 A0A1Y7VLE6 161 aa6,17□□□□□ -1,42
Pcf11-204ENSMUST00000208058 Gm10100J3QK64 120 aa6,13□□□□□ -1,43
Pcf11-204ENSMUST00000208058 4933428G20RikQ9D3X4 101 aa6,1□□□□□ -1,43
Pcf11-204ENSMUST00000208058 Lce3aQ497I5 98 aa6,05□□□□□ -1,44
Pcf11-204ENSMUST00000208058 SvipQ3UZP4 77 aa5,93□□□□□ -1,46
Pcf11-204ENSMUST00000208058 Sprr2dO70555 85 aa5,88□□□□□ -1,47
Pcf11-204ENSMUST00000208058 Sprr2eO70556 76 aa5,67□□□□□ -1,5
Pcf11-204ENSMUST00000208058 Mp68P56379 58 aa5,56□□□□□ -1,52
Pcf11-204ENSMUST00000208058 Gm10024A0A0A0MQA4 119 aa5,52□□□□□ -1,53
Pcf11-204ENSMUST00000208058 A0A1Y7VJ07 166 aa5,28□□□□□ -1,56
Pcf11-204ENSMUST00000208058 Muc16A0A140LJ72 8478 aa5,27□□□□□ -1,57
Pcf11-204ENSMUST00000208058 Gm20538F6Z9R1 75 aa5,2□□□□□ -1,58
Pcf11-204ENSMUST00000208058 Gm29735A0A1B0GT06 219 aa5,18□□□□□ -1,58
Pcf11-204ENSMUST00000208058 Gm10142J3KMP7 120 aa5,18□□□□□ -1,58
Pcf11-204ENSMUST00000208058 Sprr2hO70559 108 aa5,18□□□□□ -1,58
Pcf11-204ENSMUST00000208058 1110025L11RikO09048 78 aa4,96□□□□□ -1,62
Pcf11-204ENSMUST00000208058 Krtap6-5Q925H3 78 aa4,96□□□□□ -1,62
Pcf11-204ENSMUST00000208058 Gm11567Q9D141 195 aa4,84□□□□□ -1,63
Pcf11-204ENSMUST00000208058 Gm10229O08631 77 aa4,46□□□□□ -1,7
Pcf11-204ENSMUST00000208058 Krtap31-2Q8CAY5 177 aa4,35□□□□□ -1,71
Pcf11-204ENSMUST00000208058 A030003K21RikA0A1Y7VIM3 128 aa4,18□□□□□ -1,74
Pcf11-204ENSMUST00000208058 Krtap28-10A0A1Y7VP58 119 aa4,16□□□□□ -1,74
Pcf11-204ENSMUST00000208058 Krtap28-13A0A087WQP5 138 aa4,06□□□□□ -1,76
Pcf11-204ENSMUST00000208058 Krtap5-1Q64507 230 aa4,06□□□□□ -1,76
Pcf11-204ENSMUST00000208058 Ndufaf8A2AMZ4 74 aa4,05□□□□□ -1,76
Pcf11-204ENSMUST00000208058 A030005K14RikA0A1Y7VNY1 122 aa4,04□□□□□ -1,76
Pcf11-204ENSMUST00000208058 Sprr2bO70554 98 aa4,03□□□□□ -1,76
Pcf11-204ENSMUST00000208058 Krtap6-2O08884 159 aa4,02□□□□□ -1,77
Pcf11-204ENSMUST00000208058 Krtap31-1Q9D644 177 aa4,02□□□□□ -1,77
Pcf11-204ENSMUST00000208058 Krtap21-1Q925H4 128 aa3,99□□□□□ -1,77
Pcf11-204ENSMUST00000208058 Gm7544A0A1Y7VJ58 118 aa3,91□□□□□ -1,78
Pcf11-204ENSMUST00000208058 A030014E15RikA0A1Y7VJV2 120 aa3,81□□□□□ -1,8
Pcf11-204ENSMUST00000208058 A0A286YCP9 139 aa3,51□□□□□ -1,85
Pcf11-204ENSMUST00000208058 Gm6217A0A1Y7VJK9 128 aa3,39□□□□□ -1,87
Pcf11-204ENSMUST00000208058 Gm9112A2AI92 75 aa3,38□□□□□ -1,87
Pcf11-204ENSMUST00000208058 Phgr1Q8K0G7 91 aa3,2□□□□□ -1,9
Pcf11-204ENSMUST00000208058 Gm4559A4IF42 199 aa3□□□□□ -1,93
Retrieved 80 of 22,080 RNA–protein pairs in 42,4 ms