RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Krtap12-1Q9Z287 130 aa7,42□□□□□ -1,22
Smarcc1-207ENSMUST00000199896 Csmd3Q80T79 3707 aa7,38□□□□□ -1,23
Smarcc1-207ENSMUST00000199896 Dnah17Q69Z23 4481 aa7,32□□□□□ -1,24
Smarcc1-207ENSMUST00000199896 Hspg2Q05793 3707 aaKnown RBP7,26□□□□□ -1,25
Smarcc1-207ENSMUST00000199896 Sprr2gO70558 76 aa7,19□□□□□ -1,26
Smarcc1-207ENSMUST00000199896 Lce1mQ9CR91 182 aa7,18□□□□□ -1,26
Smarcc1-207ENSMUST00000199896 TnxbO35452 4006 aa7,17□□□□□ -1,26
Smarcc1-207ENSMUST00000199896 Dnah7bL7N1Y0 4068 aa7,14□□□□□ -1,27
Smarcc1-207ENSMUST00000199896 SacsQ9JLC8 4582 aa7,13□□□□□ -1,27
Smarcc1-207ENSMUST00000199896 Dnah6E9Q0B6 4144 aa7,13□□□□□ -1,27
Smarcc1-207ENSMUST00000199896 Dnah3Q8BW94 4083 aa7,1□□□□□ -1,27
Smarcc1-207ENSMUST00000199896 Mycbp2Q7TPH6 4711 aa7,1□□□□□ -1,27
Smarcc1-207ENSMUST00000199896 Kmt2aP55200 3966 aa7,1□□□□□ -1,27
Smarcc1-207ENSMUST00000199896 Ryr1E9PZQ0 5035 aa7,09□□□□□ -1,27
Smarcc1-207ENSMUST00000199896 Dnah11E9Q7N9 4488 aa7,08□□□□□ -1,28
Smarcc1-207ENSMUST00000199896 Dync1h1Q9JHU4 4644 aaKnown RBP7,06□□□□□ -1,28
Smarcc1-207ENSMUST00000199896 ApobE9Q414 4505 aa7,04□□□□□ -1,28
Smarcc1-207ENSMUST00000199896 Dync2h1Q45VK7 4306 aa7,03□□□□□ -1,28
Smarcc1-207ENSMUST00000199896 Dnah9B1AR51 4484 aa6,99□□□□□ -1,29
Smarcc1-207ENSMUST00000199896 Krtap9-5A2A5X3 358 aa6,98□□□□□ -1,29
Smarcc1-207ENSMUST00000199896 Dnah2P0C6F1 4456 aa6,97□□□□□ -1,29
Smarcc1-207ENSMUST00000199896 Fat1A0A1L1SQU7 4645 aa6,95□□□□□ -1,3
Smarcc1-207ENSMUST00000199896 PrkdcP97313 4128 aa6,95□□□□□ -1,3
Smarcc1-207ENSMUST00000199896 Krtap19-3Q925H6 87 aa6,92□□□□□ -1,3
Smarcc1-207ENSMUST00000199896 Krtap16-3Q8C1I6 86 aa6,91□□□□□ -1,3
Smarcc1-207ENSMUST00000199896 Dnah1E9Q8T7 4250 aa6,91□□□□□ -1,3
Smarcc1-207ENSMUST00000199896 Lce3bQ9CQM7 98 aa6,87□□□□□ -1,31
Smarcc1-207ENSMUST00000199896 Lrp1bQ9JI18 4599 aa6,85□□□□□ -1,31
Smarcc1-207ENSMUST00000199896 Prm1P02319 51 aa6,78□□□□□ -1,32
Smarcc1-207ENSMUST00000199896 Lce3cQ91V05 98 aa6,75□□□□□ -1,33
Smarcc1-207ENSMUST00000199896 Krtap19-1Q925H2 87 aa6,73□□□□□ -1,33
Smarcc1-207ENSMUST00000199896 Dnah8Q91XQ0 4731 aa6,72□□□□□ -1,33
Smarcc1-207ENSMUST00000199896 Gm10272F7CZ33 110 aa6,71□□□□□ -1,34
Smarcc1-207ENSMUST00000199896 Pkd1O08852 4293 aa6,66□□□□□ -1,34
Smarcc1-207ENSMUST00000199896 Fat3Q8BNA6 4555 aa6,62□□□□□ -1,35
Smarcc1-207ENSMUST00000199896 Gm10100J3QK64 120 aa6,61□□□□□ -1,35
Smarcc1-207ENSMUST00000199896 Ryr3A2AGL3 4863 aa6,6□□□□□ -1,35
Smarcc1-207ENSMUST00000199896 Fras1Q80T14 4010 aa6,6□□□□□ -1,35
Smarcc1-207ENSMUST00000199896 HydinQ80W93 5154 aa6,6□□□□□ -1,35
Smarcc1-207ENSMUST00000199896 Krtap22-2J3QNX6 67 aa6,6□□□□□ -1,35
Smarcc1-207ENSMUST00000199896 Gm38119A0A0A6YX29 146 aa6,59□□□□□ -1,35
Smarcc1-207ENSMUST00000199896 Mt2P02798 61 aa6,59□□□□□ -1,35
Smarcc1-207ENSMUST00000199896 2310046K23RikA0A0A6YVW6 87 aa6,59□□□□□ -1,35
Smarcc1-207ENSMUST00000199896 Dnhd1D3Z2X2 4750 aa6,57□□□□□ -1,36
Smarcc1-207ENSMUST00000199896 Herc2Q4U2R1 4836 aa6,55□□□□□ -1,36
Smarcc1-207ENSMUST00000199896 Gm7735D3YX18 52 aa6,53□□□□□ -1,36
Smarcc1-207ENSMUST00000199896 Hectd4E9Q2E4 4418 aa6,52□□□□□ -1,37
Smarcc1-207ENSMUST00000199896 Lce3eF8VQJ0 98 aa6,52□□□□□ -1,37
Smarcc1-207ENSMUST00000199896 Lce3fQ6PAI4 98 aa6,52□□□□□ -1,37
Smarcc1-207ENSMUST00000199896 Dnah7cA0A087WR13 4024 aa6,51□□□□□ -1,37
Smarcc1-207ENSMUST00000199896 Kiaa1109A2AAE1 5005 aa6,51□□□□□ -1,37
Smarcc1-207ENSMUST00000199896 Lrp1Q91ZX7 4545 aaKnown RBP6,5□□□□□ -1,37
Smarcc1-207ENSMUST00000199896 Lrp2A2ARV4 4660 aa6,5□□□□□ -1,37
Smarcc1-207ENSMUST00000199896 Dnah7aE9Q0T8 4024 aa6,47□□□□□ -1,37
Smarcc1-207ENSMUST00000199896 Krtap19-2Q925I0 141 aa6,46□□□□□ -1,37
Smarcc1-207ENSMUST00000199896 Lce3dE9Q8V1 98 aa6,44□□□□□ -1,38
Smarcc1-207ENSMUST00000199896 Krtap1-3A2A588 173 aa6,44□□□□□ -1,38
Smarcc1-207ENSMUST00000199896 Sprr2iO70560 76 aa6,43□□□□□ -1,38
Smarcc1-207ENSMUST00000199896 Gm10142J3KMP7 120 aa6,4□□□□□ -1,38
Smarcc1-207ENSMUST00000199896 Ryr2E9Q401 4966 aaKnown RBP6,4□□□□□ -1,38
Smarcc1-207ENSMUST00000199896 Gm9789Q8BIG3 52 aa6,34□□□□□ -1,39
Smarcc1-207ENSMUST00000199896 Lce3aQ497I5 98 aa6,33□□□□□ -1,4
Smarcc1-207ENSMUST00000199896 PcloQ9QYX7 5068 aa6,32□□□□□ -1,4
Smarcc1-207ENSMUST00000199896 Lce1jD3YUU5 139 aa6,31□□□□□ -1,4
Smarcc1-207ENSMUST00000199896 Fat2Q5F226 4351 aa6,3□□□□□ -1,4
Smarcc1-207ENSMUST00000199896 Lce1gQ9D195 139 aa6,29□□□□□ -1,4
Smarcc1-207ENSMUST00000199896 Lce1iQ9D6P5 149 aa6,29□□□□□ -1,4
Smarcc1-207ENSMUST00000199896 Lce1hQ9D6R3 140 aa6,29□□□□□ -1,4
Smarcc1-207ENSMUST00000199896 Gm10061D3Z714 54 aa6,22□□□□□ -1,41
Smarcc1-207ENSMUST00000199896 Vps13bQ80TY5 3993 aa6,21□□□□□ -1,42
Smarcc1-207ENSMUST00000199896 Lce1fB9EJP6 147 aa6,19□□□□□ -1,42
Smarcc1-207ENSMUST00000199896 Lce1cQ9D1C5 147 aa6,19□□□□□ -1,42
Smarcc1-207ENSMUST00000199896 Lce1lQ9D1G7 135 aa6,19□□□□□ -1,42
Smarcc1-207ENSMUST00000199896 Lce1dQ9D731 133 aa6,19□□□□□ -1,42
Smarcc1-207ENSMUST00000199896 Lce1bQ9D149 137 aa6,18□□□□□ -1,42
Smarcc1-207ENSMUST00000199896 Gm11569B1AQB1 180 aa6,18□□□□□ -1,42
Smarcc1-207ENSMUST00000199896 Kmt2cQ8BRH4 4903 aa6,18□□□□□ -1,42
Smarcc1-207ENSMUST00000199896 Mdn1A2ANY6 5589 aaKnown RBP6,07□□□□□ -1,44
Smarcc1-207ENSMUST00000199896 Herc1E9PZP8 4859 aa6,06□□□□□ -1,44
Smarcc1-207ENSMUST00000199896 Sprr2fO70557 76 aa6,04□□□□□ -1,44
Smarcc1-207ENSMUST00000199896 Sprr2eO70556 76 aa6,04□□□□□ -1,44
Smarcc1-207ENSMUST00000199896 Lce1eQ9D139 143 aa6,04□□□□□ -1,44
Smarcc1-207ENSMUST00000199896 Pkhd1E9PZ36 4059 aa6,01□□□□□ -1,45
Smarcc1-207ENSMUST00000199896 Gm10024A0A0A0MQA4 119 aa5,98□□□□□ -1,45
Smarcc1-207ENSMUST00000199896 Mt4P47945 62 aa5,98□□□□□ -1,45
Smarcc1-207ENSMUST00000199896 Birc6O88738 4882 aa5,97□□□□□ -1,45
Smarcc1-207ENSMUST00000199896 Krtap4-2B1AQ85 167 aa5,94□□□□□ -1,46
Smarcc1-207ENSMUST00000199896 Pkhd1l1Q80ZA4 4249 aa5,92□□□□□ -1,46
Smarcc1-207ENSMUST00000199896 Abca13Q5SSE9 5034 aa5,89□□□□□ -1,47
Smarcc1-207ENSMUST00000199896 Krtap4-6Q3V4B7 195 aa5,87□□□□□ -1,47
Smarcc1-207ENSMUST00000199896 Krtap9-3Q3V2C1 136 aa5,84□□□□□ -1,47
Smarcc1-207ENSMUST00000199896 Krtap19-4Q925H7 84 aa5,79□□□□□ -1,48
Smarcc1-207ENSMUST00000199896 4932415D10RikA0A1W2P6U8 4986 aa5,73□□□□□ -1,49
Smarcc1-207ENSMUST00000199896 Syne1Q6ZWR6 8799 aa5,69□□□□□ -1,5
Smarcc1-207ENSMUST00000199896 Lce1a2Q9D1K4 149 aa5,68□□□□□ -1,5
Smarcc1-207ENSMUST00000199896 Ubr4A2AN08 5180 aa5,67□□□□□ -1,5
Smarcc1-207ENSMUST00000199896 Krtap4-1Q3UUY3 169 aa5,61□□□□□ -1,51
Smarcc1-207ENSMUST00000199896 Fat4Q2PZL6 4981 aa5,54□□□□□ -1,52
Smarcc1-207ENSMUST00000199896 Gm11596B1AQB0 205 aa5,53□□□□□ -1,52
Smarcc1-207ENSMUST00000199896 Gm11564A2A4L9 201 aa5,49□□□□□ -1,53
Retrieved 100 of 22,080 RNA–protein pairs in 8,4 ms