RNA–Protein interactions for RNA: ENSMUST00000193170.1

Ccdc71-202, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-202ENSMUST00000193170 Ryr3A2AGL3 4863 aa4.74□□□□□ -1.65
Ccdc71-202ENSMUST00000193170 Ryr2E9Q401 4966 aaKnown RBP4.7□□□□□ -1.66
Ccdc71-202ENSMUST00000193170 Krtap1-3A2A588 173 aa4.68□□□□□ -1.66
Ccdc71-202ENSMUST00000193170 Gm40193A0A1B0GT39 78 aa4.67□□□□□ -1.66
Ccdc71-202ENSMUST00000193170 Mycbp2Q7TPH6 4711 aa4.67□□□□□ -1.66
Ccdc71-202ENSMUST00000193170 Cox6b2Q80ZN9 88 aa4.63□□□□□ -1.67
Ccdc71-202ENSMUST00000193170 Lce1mQ9CR91 182 aa4.63□□□□□ -1.67
Ccdc71-202ENSMUST00000193170 Fat3Q8BNA6 4555 aa4.6□□□□□ -1.67
Ccdc71-202ENSMUST00000193170 Gm10382Q3V0T5 144 aa4.59□□□□□ -1.67
Ccdc71-202ENSMUST00000193170 Abca13Q5SSE9 5034 aa4.57□□□□□ -1.68
Ccdc71-202ENSMUST00000193170 Gm18596A0A1W2P860 280 aa4.56□□□□□ -1.68
Ccdc71-202ENSMUST00000193170 Kmt2cQ8BRH4 4903 aa4.56□□□□□ -1.68
Ccdc71-202ENSMUST00000193170 Gm9736A0A1W2P7N1 277 aa4.55□□□□□ -1.68
Ccdc71-202ENSMUST00000193170 Gm17416Q30KP4 66 aa4.53□□□□□ -1.68
Ccdc71-202ENSMUST00000193170 Birc6O88738 4882 aa4.47□□□□□ -1.69
Ccdc71-202ENSMUST00000193170 Dnah8Q91XQ0 4731 aa4.47□□□□□ -1.69
Ccdc71-202ENSMUST00000193170 Rps29P62274 56 aa4.47□□□□□ -1.69
Ccdc71-202ENSMUST00000193170 Gm9955Q8CEJ8 102 aa4.46□□□□□ -1.69
Ccdc71-202ENSMUST00000193170 Gm5767A0A0J9YTU8 78 aa4.45□□□□□ -1.7
Ccdc71-202ENSMUST00000193170 Lce1jD3YUU5 139 aa4.45□□□□□ -1.7
Ccdc71-202ENSMUST00000193170 Herc2Q4U2R1 4836 aa4.43□□□□□ -1.7
Ccdc71-202ENSMUST00000193170 Gm17606F6ZL36 78 aa4.42□□□□□ -1.7
Ccdc71-202ENSMUST00000193170 Rpl37Q9D823 97 aa4.41□□□□□ -1.7
Ccdc71-202ENSMUST00000193170 Krtap7-1Q9D3I6 87 aa4.41□□□□□ -1.7
Ccdc71-202ENSMUST00000193170 Gm11562A0PK51 136 aa4.39□□□□□ -1.71
Ccdc71-202ENSMUST00000193170 HydinQ80W93 5154 aa4.38□□□□□ -1.71
Ccdc71-202ENSMUST00000193170 Gm19668J3QMD1 248 aa4.38□□□□□ -1.71
Ccdc71-202ENSMUST00000193170 Krtap19-5O08632 62 aa4.37□□□□□ -1.71
Ccdc71-202ENSMUST00000193170 Lrp2A2ARV4 4660 aa4.28□□□□□ -1.72
Ccdc71-202ENSMUST00000193170 Prm1P02319 51 aa4.26□□□□□ -1.73
Ccdc71-202ENSMUST00000193170 Kiaa1109A2AAE1 5005 aa4.25□□□□□ -1.73
Ccdc71-202ENSMUST00000193170 4932415D10RikA0A1W2P6U8 4986 aa4.23□□□□□ -1.73
Ccdc71-202ENSMUST00000193170 PcloQ9QYX7 5068 aa4.23□□□□□ -1.73
Ccdc71-202ENSMUST00000193170 Gm19426M0QWC7 77 aa4.23□□□□□ -1.73
Ccdc71-202ENSMUST00000193170 Lce1bQ9D149 137 aa4.23□□□□□ -1.73
Ccdc71-202ENSMUST00000193170 Herc1E9PZP8 4859 aa4.22□□□□□ -1.73
Ccdc71-202ENSMUST00000193170 Gm7735D3YX18 52 aa4.21□□□□□ -1.74
Ccdc71-202ENSMUST00000193170 Dnhd1D3Z2X2 4750 aa4.21□□□□□ -1.74
Ccdc71-202ENSMUST00000193170 Gm19402J3QJV4 266 aa4.21□□□□□ -1.74
Ccdc71-202ENSMUST00000193170 Ubr4A2AN08 5180 aa4.18□□□□□ -1.74
Ccdc71-202ENSMUST00000193170 Krtap13-1Q8K198 168 aa4.16□□□□□ -1.74
Ccdc71-202ENSMUST00000193170 Gm10318A0A1W2P728 225 aa4.15□□□□□ -1.74
Ccdc71-202ENSMUST00000193170 4933428G20RikQ9D3X4 101 aa4.14□□□□□ -1.75
Ccdc71-202ENSMUST00000193170 Gm38119A0A0A6YX29 146 aa4.13□□□□□ -1.75
Ccdc71-202ENSMUST00000193170 BC029722A0A0N4SW31 51 aa4.1□□□□□ -1.75
Ccdc71-202ENSMUST00000193170 Lce1hQ9D6R3 140 aa4.1□□□□□ -1.75
Ccdc71-202ENSMUST00000193170 Crct1Q6PAI5 102 aa4.06□□□□□ -1.76
Ccdc71-202ENSMUST00000193170 Gm9789Q8BIG3 52 aa4.06□□□□□ -1.76
Ccdc71-202ENSMUST00000193170 Fat4Q2PZL6 4981 aa3.97□□□□□ -1.77
Ccdc71-202ENSMUST00000193170 Krtap1-4Q3V2D6 188 aa3.97□□□□□ -1.77
Ccdc71-202ENSMUST00000193170 Spink7Q6IE32 76 aa3.96□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 Ush2AQ2QI47 5193 aa3.96□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 Krtap1-5A2A590 122 aa3.95□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 Lce1eQ9D139 143 aa3.95□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 Sprr2a3Q4KL71 83 aa3.93□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 Sprr2a1Q9CQK8 83 aa3.93□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 ZanO88799 5376 aa3.92□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 Gm17402F6Z0L5 76 aa3.91□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 Krtap16-3Q8C1I6 86 aa3.91□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 Krtap4-2B1AQ85 167 aa3.9□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 Hmcn2A2AJ76 5100 aa3.9□□□□□ -1.78
Ccdc71-202ENSMUST00000193170 Krtap19-1Q925H2 87 aa3.81□□□□□ -1.8
Ccdc71-202ENSMUST00000193170 Krtap19-3Q925H6 87 aa3.8□□□□□ -1.8
Ccdc71-202ENSMUST00000193170 Krtap4-1Q3UUY3 169 aa3.79□□□□□ -1.8
Ccdc71-202ENSMUST00000193170 Lce1gQ9D195 139 aa3.77□□□□□ -1.81
Ccdc71-202ENSMUST00000193170 Rnf213E9Q555 5152 aaKnown RBP3.75□□□□□ -1.81
Ccdc71-202ENSMUST00000193170 Gm11559Q9D3H7 191 aa3.72□□□□□ -1.81
Ccdc71-202ENSMUST00000193170 Syne2Q6ZWQ0 6874 aaKnown RBP3.7□□□□□ -1.82
Ccdc71-202ENSMUST00000193170 Gm11569B1AQB1 180 aa3.6□□□□□ -1.83
Ccdc71-202ENSMUST00000193170 Gm11563B1AQ90 168 aa3.59□□□□□ -1.84
Ccdc71-202ENSMUST00000193170 Krtap4-7Q9D732 168 aa3.59□□□□□ -1.84
Ccdc71-202ENSMUST00000193170 Gm10272F7CZ33 110 aa3.57□□□□□ -1.84
Ccdc71-202ENSMUST00000193170 Gm11596B1AQB0 205 aa3.57□□□□□ -1.84
Ccdc71-202ENSMUST00000193170 Tnp1P10856 55 aa3.55□□□□□ -1.84
Ccdc71-202ENSMUST00000193170 Krtap12-1Q9Z287 130 aa3.54□□□□□ -1.84
Ccdc71-202ENSMUST00000193170 Gm10061D3Z714 54 aa3.52□□□□□ -1.85
Ccdc71-202ENSMUST00000193170 Gm11555B1AQ89 175 aa3.52□□□□□ -1.85
Ccdc71-202ENSMUST00000193170 Krtap19-9aF8WH65 55 aa3.51□□□□□ -1.85
Ccdc71-202ENSMUST00000193170 Krtap9-3Q3V2C1 136 aa3.51□□□□□ -1.85
Ccdc71-202ENSMUST00000193170 Lce1a2Q9D1K4 149 aa3.46□□□□□ -1.85
Ccdc71-202ENSMUST00000193170 Lce1iQ9D6P5 149 aa3.46□□□□□ -1.85
Ccdc71-202ENSMUST00000193170 Muc5bE9Q5I3 4800 aa3.46□□□□□ -1.86
Ccdc71-202ENSMUST00000193170 2300003K06RikA2A4M0 262 aa3.45□□□□□ -1.86
Ccdc71-202ENSMUST00000193170 SspoQ8CG65 4998 aa3.41□□□□□ -1.86
Ccdc71-202ENSMUST00000193170 Krtap8-1O08633 61 aa3.41□□□□□ -1.86
Ccdc71-202ENSMUST00000193170 2310046K23RikA0A0A6YVW6 87 aa3.37□□□□□ -1.87
Ccdc71-202ENSMUST00000193170 Krtap19-9bQ99NG9 58 aa3.34□□□□□ -1.87
Ccdc71-202ENSMUST00000193170 Krtap4-6Q3V4B7 195 aa3.34□□□□□ -1.88
Ccdc71-202ENSMUST00000193170 Krtap9-5A2A5X3 358 aa3.33□□□□□ -1.88
Ccdc71-202ENSMUST00000193170 Krtap19-2Q925I0 141 aa3.32□□□□□ -1.88
Ccdc71-202ENSMUST00000193170 Lce1dQ9D731 133 aa3.32□□□□□ -1.88
Ccdc71-202ENSMUST00000193170 Gm10024A0A0A0MQA4 119 aa3.31□□□□□ -1.88
Ccdc71-202ENSMUST00000193170 Krtap9-1Q64526 186 aa3.29□□□□□ -1.88
Ccdc71-202ENSMUST00000193170 Gm11568A2A4M2 211 aa3.29□□□□□ -1.88
Ccdc71-202ENSMUST00000193170 Gm11564A2A4L9 201 aa3.26□□□□□ -1.89
Ccdc71-202ENSMUST00000193170 Gm11595B1AQA7 289 aa3.26□□□□□ -1.89
Ccdc71-202ENSMUST00000193170 Krtap4-8B1AQA8 209 aa3.26□□□□□ -1.89
Ccdc71-202ENSMUST00000193170 Krtap6-3A0A087WQL6 57 aa3.25□□□□□ -1.89
Ccdc71-202ENSMUST00000193170 Sprr2iO70560 76 aa3.17□□□□□ -1.9
Ccdc71-202ENSMUST00000193170 Eppk1Q8R0W0 6548 aa3.17□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms