RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 Gm17402F6Z0L5 76 aa4.42□□□□□ -1.7
Pdgfra-202ENSMUST00000168162 Krtap4-6Q3V4B7 195 aa4.39□□□□□ -1.71
Pdgfra-202ENSMUST00000168162 Huwe1Q7TMY8 4377 aaKnown RBP4.38□□□□□ -1.71
Pdgfra-202ENSMUST00000168162 Gm11596B1AQB0 205 aa4.37□□□□□ -1.71
Pdgfra-202ENSMUST00000168162 TnxbO35452 4006 aa4.3□□□□□ -1.72
Pdgfra-202ENSMUST00000168162 Lce1jD3YUU5 139 aa4.29□□□□□ -1.72
Pdgfra-202ENSMUST00000168162 Lce1iQ9D6P5 149 aa4.29□□□□□ -1.72
Pdgfra-202ENSMUST00000168162 Lce1hQ9D6R3 140 aa4.29□□□□□ -1.72
Pdgfra-202ENSMUST00000168162 Lce3cQ91V05 98 aa4.28□□□□□ -1.72
Pdgfra-202ENSMUST00000168162 Gm11562A0PK51 136 aa4.26□□□□□ -1.73
Pdgfra-202ENSMUST00000168162 Gm9789Q8BIG3 52 aa4.25□□□□□ -1.73
Pdgfra-202ENSMUST00000168162 Lce1bQ9D149 137 aa4.25□□□□□ -1.73
Pdgfra-202ENSMUST00000168162 Krtap16-3Q8C1I6 86 aa4.24□□□□□ -1.73
Pdgfra-202ENSMUST00000168162 Gm11939A2A592 99 aa4.24□□□□□ -1.73
Pdgfra-202ENSMUST00000168162 Krtap12-1Q9Z287 130 aa4.23□□□□□ -1.73
Pdgfra-202ENSMUST00000168162 BsnO88737 3942 aa4.22□□□□□ -1.73
Pdgfra-202ENSMUST00000168162 Sprr2eO70556 76 aa4.21□□□□□ -1.73
Pdgfra-202ENSMUST00000168162 Sprr2hO70559 108 aa4.19□□□□□ -1.74
Pdgfra-202ENSMUST00000168162 Krtap4-1Q3UUY3 169 aa4.18□□□□□ -1.74
Pdgfra-202ENSMUST00000168162 Krtap1-4Q3V2D6 188 aa4.18□□□□□ -1.74
Pdgfra-202ENSMUST00000168162 Krtap19-3Q925H6 87 aa4.17□□□□□ -1.74
Pdgfra-202ENSMUST00000168162 Gm10061D3Z714 54 aa4.17□□□□□ -1.74
Pdgfra-202ENSMUST00000168162 Lce1fB9EJP6 147 aa4.17□□□□□ -1.74
Pdgfra-202ENSMUST00000168162 Lce1cQ9D1C5 147 aa4.17□□□□□ -1.74
Pdgfra-202ENSMUST00000168162 Lce1dQ9D731 133 aa4.17□□□□□ -1.74
Pdgfra-202ENSMUST00000168162 Krtap3-2Q9D638 99 aa4.16□□□□□ -1.74
Pdgfra-202ENSMUST00000168162 Krtap3-3Q9D7P0 99 aa4.16□□□□□ -1.74
Pdgfra-202ENSMUST00000168162 Gm11564A2A4L9 201 aa4.14□□□□□ -1.75
Pdgfra-202ENSMUST00000168162 Gm11563B1AQ90 168 aa4.14□□□□□ -1.75
Pdgfra-202ENSMUST00000168162 Gm11595B1AQA7 289 aa4.14□□□□□ -1.75
Pdgfra-202ENSMUST00000168162 Krtap4-8B1AQA8 209 aa4.14□□□□□ -1.75
Pdgfra-202ENSMUST00000168162 Krtap3-1A2A591 98 aa4.1□□□□□ -1.75
Pdgfra-202ENSMUST00000168162 Lce3dE9Q8V1 98 aa4.1□□□□□ -1.75
Pdgfra-202ENSMUST00000168162 Krtap4-9B1AQA9 244 aa4.07□□□□□ -1.76
Pdgfra-202ENSMUST00000168162 Krtap4-7Q9D732 168 aa4.06□□□□□ -1.76
Pdgfra-202ENSMUST00000168162 Krtap19-9bQ99NG9 58 aa4.05□□□□□ -1.76
Pdgfra-202ENSMUST00000168162 Krtap19-4Q925H7 84 aa4.05□□□□□ -1.76
Pdgfra-202ENSMUST00000168162 Krtap1-5A2A590 122 aa4.04□□□□□ -1.76
Pdgfra-202ENSMUST00000168162 Krtap9-3Q3V2C1 136 aa4.03□□□□□ -1.76
Pdgfra-202ENSMUST00000168162 2300003K06RikA2A4M0 262 aa4.03□□□□□ -1.76
Pdgfra-202ENSMUST00000168162 Dnah14A0A140LIJ4 4489 aa4.03□□□□□ -1.77
Pdgfra-202ENSMUST00000168162 Sprr2a3Q4KL71 83 aa4.02□□□□□ -1.77
Pdgfra-202ENSMUST00000168162 Sprr2a1Q9CQK8 83 aa4.02□□□□□ -1.77
Pdgfra-202ENSMUST00000168162 Krtap4-13Q9D7P3 165 aa4.01□□□□□ -1.77
Pdgfra-202ENSMUST00000168162 Krtap22-2J3QNX6 67 aa4.01□□□□□ -1.77
Pdgfra-202ENSMUST00000168162 Lce1a1Q9CQH5 143 aa4□□□□□ -1.77
Pdgfra-202ENSMUST00000168162 Lce3eF8VQJ0 98 aa4□□□□□ -1.77
Pdgfra-202ENSMUST00000168162 Lce3fQ6PAI4 98 aa4□□□□□ -1.77
Pdgfra-202ENSMUST00000168162 Dnah3Q8BW94 4083 aa3.99□□□□□ -1.77
Pdgfra-202ENSMUST00000168162 Gm10272F7CZ33 110 aa3.97□□□□□ -1.77
Pdgfra-202ENSMUST00000168162 PlecQ9QXS1 4691 aaKnown RBP3.95□□□□□ -1.78
Pdgfra-202ENSMUST00000168162 Krtap1-3A2A588 173 aa3.94□□□□□ -1.78
Pdgfra-202ENSMUST00000168162 PrkdcP97313 4128 aa3.94□□□□□ -1.78
Pdgfra-202ENSMUST00000168162 Lce1eQ9D139 143 aa3.9□□□□□ -1.78
Pdgfra-202ENSMUST00000168162 Lce3aQ497I5 98 aa3.9□□□□□ -1.79
Pdgfra-202ENSMUST00000168162 Mt2P02798 61 aa3.89□□□□□ -1.79
Pdgfra-202ENSMUST00000168162 Dnhd1D3Z2X2 4750 aa3.89□□□□□ -1.79
Pdgfra-202ENSMUST00000168162 Fras1Q80T14 4010 aa3.89□□□□□ -1.79
Pdgfra-202ENSMUST00000168162 Krtap6-3A0A087WQL6 57 aa3.88□□□□□ -1.79
Pdgfra-202ENSMUST00000168162 Fat1A0A1L1SQU7 4645 aa3.87□□□□□ -1.79
Pdgfra-202ENSMUST00000168162 Syne2Q6ZWQ0 6874 aaKnown RBP3.8□□□□□ -1.8
Pdgfra-202ENSMUST00000168162 Vps13dB1ART2 4390 aa3.79□□□□□ -1.8
Pdgfra-202ENSMUST00000168162 Dnah5Q8VHE6 4621 aa3.78□□□□□ -1.8
Pdgfra-202ENSMUST00000168162 Dnah10D3YYQ8 4591 aa3.77□□□□□ -1.81
Pdgfra-202ENSMUST00000168162 Stard9Q80TF6 4561 aa3.76□□□□□ -1.81
Pdgfra-202ENSMUST00000168162 Gm11554B1AQB2 190 aa3.74□□□□□ -1.81
Pdgfra-202ENSMUST00000168162 Mycbp2Q7TPH6 4711 aa3.74□□□□□ -1.81
Pdgfra-202ENSMUST00000168162 Krtap19-2Q925I0 141 aa3.72□□□□□ -1.81
Pdgfra-202ENSMUST00000168162 Sprr2bO70554 98 aa3.72□□□□□ -1.81
Pdgfra-202ENSMUST00000168162 Gm10100J3QK64 120 aa3.69□□□□□ -1.82
Pdgfra-202ENSMUST00000168162 Dnah7bL7N1Y0 4068 aa3.68□□□□□ -1.82
Pdgfra-202ENSMUST00000168162 Pkd1O08852 4293 aa3.67□□□□□ -1.82
Pdgfra-202ENSMUST00000168162 Herc2Q4U2R1 4836 aa3.66□□□□□ -1.82
Pdgfra-202ENSMUST00000168162 Gm10024A0A0A0MQA4 119 aa3.64□□□□□ -1.83
Pdgfra-202ENSMUST00000168162 Dync2h1Q45VK7 4306 aa3.64□□□□□ -1.83
Pdgfra-202ENSMUST00000168162 Dnah17Q69Z23 4481 aa3.63□□□□□ -1.83
Pdgfra-202ENSMUST00000168162 Kmt2aP55200 3966 aa3.62□□□□□ -1.83
Pdgfra-202ENSMUST00000168162 Dync1h1Q9JHU4 4644 aaKnown RBP3.6□□□□□ -1.83
Pdgfra-202ENSMUST00000168162 Dnah8Q91XQ0 4731 aa3.59□□□□□ -1.83
Pdgfra-202ENSMUST00000168162 Dnah9B1AR51 4484 aa3.58□□□□□ -1.84
Pdgfra-202ENSMUST00000168162 SacsQ9JLC8 4582 aa3.58□□□□□ -1.84
Pdgfra-202ENSMUST00000168162 Vps13bQ80TY5 3993 aa3.58□□□□□ -1.84
Pdgfra-202ENSMUST00000168162 Ryr1E9PZQ0 5035 aa3.57□□□□□ -1.84
Pdgfra-202ENSMUST00000168162 Dnah6E9Q0B6 4144 aa3.57□□□□□ -1.84
Pdgfra-202ENSMUST00000168162 ApobE9Q414 4505 aa3.57□□□□□ -1.84
Pdgfra-202ENSMUST00000168162 Krtap19-1Q925H2 87 aa3.55□□□□□ -1.84
Pdgfra-202ENSMUST00000168162 Dnah1E9Q8T7 4250 aa3.54□□□□□ -1.84
Pdgfra-202ENSMUST00000168162 Fsip2A2ARZ3 6995 aa3.53□□□□□ -1.84
Pdgfra-202ENSMUST00000168162 Lce1a2Q9D1K4 149 aa3.52□□□□□ -1.85
Pdgfra-202ENSMUST00000168162 Lce1kJ3QP15 125 aa3.51□□□□□ -1.85
Pdgfra-202ENSMUST00000168162 Dnah11E9Q7N9 4488 aa3.49□□□□□ -1.85
Pdgfra-202ENSMUST00000168162 Sprr2dO70555 85 aa3.49□□□□□ -1.85
Pdgfra-202ENSMUST00000168162 Lrp2A2ARV4 4660 aa3.48□□□□□ -1.85
Pdgfra-202ENSMUST00000168162 Dnah2P0C6F1 4456 aa3.45□□□□□ -1.86
Pdgfra-202ENSMUST00000168162 Dnah7aE9Q0T8 4024 aa3.42□□□□□ -1.86
Pdgfra-202ENSMUST00000168162 Dnah7cA0A087WR13 4024 aa3.42□□□□□ -1.86
Pdgfra-202ENSMUST00000168162 Eppk1Q8R0W0 6548 aa3.41□□□□□ -1.86
Pdgfra-202ENSMUST00000168162 Gm10142J3KMP7 120 aa3.4□□□□□ -1.87
Pdgfra-202ENSMUST00000168162 Fat3Q8BNA6 4555 aa3.4□□□□□ -1.87
Pdgfra-202ENSMUST00000168162 4932415D10RikA0A1W2P6U8 4986 aa3.39□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 133.3 ms