RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Krtap1-4Q3V2D6 188 aa7.23□□□□□ -1.25
Trim71-201ENSMUST00000111816 Gm10100J3QK64 120 aa7.21□□□□□ -1.25
Trim71-201ENSMUST00000111816 Lce3bQ9CQM7 98 aa7.1□□□□□ -1.27
Trim71-201ENSMUST00000111816 Gm10272F7CZ33 110 aa7.09□□□□□ -1.27
Trim71-201ENSMUST00000111816 Lce3cQ91V05 98 aa7.07□□□□□ -1.28
Trim71-201ENSMUST00000111816 Gm10142J3KMP7 120 aa7.04□□□□□ -1.28
Trim71-201ENSMUST00000111816 Dnah6E9Q0B6 4144 aa7.02□□□□□ -1.29
Trim71-201ENSMUST00000111816 Kmt2aP55200 3966 aa6.94□□□□□ -1.3
Trim71-201ENSMUST00000111816 2310046K23RikA0A0A6YVW6 87 aa6.9□□□□□ -1.3
Trim71-201ENSMUST00000111816 Lce3eF8VQJ0 98 aa6.9□□□□□ -1.31
Trim71-201ENSMUST00000111816 Lce3fQ6PAI4 98 aa6.9□□□□□ -1.31
Trim71-201ENSMUST00000111816 PrkdcP97313 4128 aa6.89□□□□□ -1.31
Trim71-201ENSMUST00000111816 Lce3dE9Q8V1 98 aa6.83□□□□□ -1.32
Trim71-201ENSMUST00000111816 LorP18165 486 aa6.75□□□□□ -1.33
Trim71-201ENSMUST00000111816 TnxbO35452 4006 aa6.75□□□□□ -1.33
Trim71-201ENSMUST00000111816 Huwe1Q7TMY8 4377 aaKnown RBP6.74□□□□□ -1.33
Trim71-201ENSMUST00000111816 Lce3aQ497I5 98 aa6.72□□□□□ -1.33
Trim71-201ENSMUST00000111816 Dnah10D3YYQ8 4591 aa6.66□□□□□ -1.34
Trim71-201ENSMUST00000111816 Krtap31-1Q9D644 177 aa6.64□□□□□ -1.35
Trim71-201ENSMUST00000111816 Gm10024A0A0A0MQA4 119 aa6.6□□□□□ -1.35
Trim71-201ENSMUST00000111816 Krtap31-2Q8CAY5 177 aa6.57□□□□□ -1.36
Trim71-201ENSMUST00000111816 Fras1Q80T14 4010 aa6.53□□□□□ -1.36
Trim71-201ENSMUST00000111816 Sprr2iO70560 76 aa6.52□□□□□ -1.37
Trim71-201ENSMUST00000111816 Dnah1E9Q8T7 4250 aa6.48□□□□□ -1.37
Trim71-201ENSMUST00000111816 Dnah14A0A140LIJ4 4489 aa6.48□□□□□ -1.37
Trim71-201ENSMUST00000111816 Sprr2fO70557 76 aa6.45□□□□□ -1.38
Trim71-201ENSMUST00000111816 Pkhd1E9PZ36 4059 aa6.36□□□□□ -1.39
Trim71-201ENSMUST00000111816 Krtap19-3Q925H6 87 aa6.34□□□□□ -1.39
Trim71-201ENSMUST00000111816 Lce1jD3YUU5 139 aa6.29□□□□□ -1.4
Trim71-201ENSMUST00000111816 Sprr2eO70556 76 aa6.29□□□□□ -1.4
Trim71-201ENSMUST00000111816 Lce1gQ9D195 139 aa6.29□□□□□ -1.4
Trim71-201ENSMUST00000111816 Lce1iQ9D6P5 149 aa6.29□□□□□ -1.4
Trim71-201ENSMUST00000111816 Lce1hQ9D6R3 140 aa6.29□□□□□ -1.4
Trim71-201ENSMUST00000111816 Krtap16-3Q8C1I6 86 aa6.24□□□□□ -1.41
Trim71-201ENSMUST00000111816 Krtap22-2J3QNX6 67 aa6.21□□□□□ -1.41
Trim71-201ENSMUST00000111816 Vps13dB1ART2 4390 aa6.18□□□□□ -1.42
Trim71-201ENSMUST00000111816 Krtap9-5A2A5X3 358 aa6.15□□□□□ -1.43
Trim71-201ENSMUST00000111816 Krtap19-2Q925I0 141 aa6.12□□□□□ -1.43
Trim71-201ENSMUST00000111816 Pkhd1l1Q80ZA4 4249 aa6.11□□□□□ -1.43
Trim71-201ENSMUST00000111816 Lce1bQ9D149 137 aa6.11□□□□□ -1.43
Trim71-201ENSMUST00000111816 Dnah5Q8VHE6 4621 aa6.1□□□□□ -1.43
Trim71-201ENSMUST00000111816 Lce1mQ9CR91 182 aa6.08□□□□□ -1.44
Trim71-201ENSMUST00000111816 Krtap19-4Q925H7 84 aa6.08□□□□□ -1.44
Trim71-201ENSMUST00000111816 Mt2P02798 61 aa6.08□□□□□ -1.44
Trim71-201ENSMUST00000111816 Lce1eQ9D139 143 aa6.07□□□□□ -1.44
Trim71-201ENSMUST00000111816 Krtap9-3Q3V2C1 136 aa6.06□□□□□ -1.44
Trim71-201ENSMUST00000111816 Lce1fB9EJP6 147 aa6.06□□□□□ -1.44
Trim71-201ENSMUST00000111816 Lce1cQ9D1C5 147 aa6.06□□□□□ -1.44
Trim71-201ENSMUST00000111816 Lce1lQ9D1G7 135 aa6.06□□□□□ -1.44
Trim71-201ENSMUST00000111816 Lce1dQ9D731 133 aa6.06□□□□□ -1.44
Trim71-201ENSMUST00000111816 Dync2h1Q45VK7 4306 aa6.03□□□□□ -1.44
Trim71-201ENSMUST00000111816 Gm38119A0A0A6YX29 146 aa6.02□□□□□ -1.45
Trim71-201ENSMUST00000111816 Dnah2P0C6F1 4456 aa5.99□□□□□ -1.45
Trim71-201ENSMUST00000111816 Ryr1E9PZQ0 5035 aa5.98□□□□□ -1.45
Trim71-201ENSMUST00000111816 Hectd4E9Q2E4 4418 aa5.97□□□□□ -1.45
Trim71-201ENSMUST00000111816 Sprr2hO70559 108 aa5.91□□□□□ -1.46
Trim71-201ENSMUST00000111816 Lrp1Q91ZX7 4545 aaKnown RBP5.9□□□□□ -1.46
Trim71-201ENSMUST00000111816 Dnah11E9Q7N9 4488 aa5.88□□□□□ -1.47
Trim71-201ENSMUST00000111816 Mt3P28184 68 aa5.86□□□□□ -1.47
Trim71-201ENSMUST00000111816 Stard9Q80TF6 4561 aa5.79□□□□□ -1.48
Trim71-201ENSMUST00000111816 Sprr2dO70555 85 aa5.78□□□□□ -1.48
Trim71-201ENSMUST00000111816 PlecQ9QXS1 4691 aaKnown RBP5.75□□□□□ -1.49
Trim71-201ENSMUST00000111816 Dnah17Q69Z23 4481 aa5.72□□□□□ -1.49
Trim71-201ENSMUST00000111816 ApobE9Q414 4505 aa5.7□□□□□ -1.5
Trim71-201ENSMUST00000111816 Dnah9B1AR51 4484 aa5.65□□□□□ -1.51
Trim71-201ENSMUST00000111816 Krtap1-3A2A588 173 aa5.58□□□□□ -1.52
Trim71-201ENSMUST00000111816 SacsQ9JLC8 4582 aa5.57□□□□□ -1.52
Trim71-201ENSMUST00000111816 Dync1h1Q9JHU4 4644 aaKnown RBP5.55□□□□□ -1.52
Trim71-201ENSMUST00000111816 Mycbp2Q7TPH6 4711 aa5.55□□□□□ -1.52
Trim71-201ENSMUST00000111816 Krtap19-1Q925H2 87 aa5.54□□□□□ -1.52
Trim71-201ENSMUST00000111816 Dnah8Q91XQ0 4731 aa5.53□□□□□ -1.52
Trim71-201ENSMUST00000111816 Prm1P02319 51 aa5.53□□□□□ -1.52
Trim71-201ENSMUST00000111816 Pkd1O08852 4293 aa5.5□□□□□ -1.53
Trim71-201ENSMUST00000111816 Fat1A0A1L1SQU7 4645 aa5.43□□□□□ -1.54
Trim71-201ENSMUST00000111816 Lrp1bQ9JI18 4599 aa5.38□□□□□ -1.55
Trim71-201ENSMUST00000111816 Fat2Q5F226 4351 aa5.35□□□□□ -1.55
Trim71-201ENSMUST00000111816 Fat3Q8BNA6 4555 aa5.29□□□□□ -1.56
Trim71-201ENSMUST00000111816 Gm11938Q9D3H4 131 aa5.27□□□□□ -1.57
Trim71-201ENSMUST00000111816 Gm11562A0PK51 136 aa5.21□□□□□ -1.58
Trim71-201ENSMUST00000111816 Mt4P47945 62 aa5.16□□□□□ -1.58
Trim71-201ENSMUST00000111816 PcloQ9QYX7 5068 aa5.14□□□□□ -1.59
Trim71-201ENSMUST00000111816 Ryr2E9Q401 4966 aaKnown RBP5.13□□□□□ -1.59
Trim71-201ENSMUST00000111816 Krtap4-16Q91W93 202 aa5.11□□□□□ -1.59
Trim71-201ENSMUST00000111816 Dnhd1D3Z2X2 4750 aa5.1□□□□□ -1.59
Trim71-201ENSMUST00000111816 Gm7735D3YX18 52 aa5.09□□□□□ -1.59
Trim71-201ENSMUST00000111816 Lce1kJ3QP15 125 aa5.08□□□□□ -1.6
Trim71-201ENSMUST00000111816 Gm11569B1AQB1 180 aa5.05□□□□□ -1.6
Trim71-201ENSMUST00000111816 Lce1a1Q9CQH5 143 aa5.05□□□□□ -1.6
Trim71-201ENSMUST00000111816 Lce1a2Q9D1K4 149 aa5.05□□□□□ -1.6
Trim71-201ENSMUST00000111816 Kiaa1109A2AAE1 5005 aa5.03□□□□□ -1.6
Trim71-201ENSMUST00000111816 Gm9789Q8BIG3 52 aa5.02□□□□□ -1.61
Trim71-201ENSMUST00000111816 Gm10061D3Z714 54 aa5.01□□□□□ -1.61
Trim71-201ENSMUST00000111816 Sprr2bO70554 98 aa5.01□□□□□ -1.61
Trim71-201ENSMUST00000111816 Herc2Q4U2R1 4836 aa4.98□□□□□ -1.61
Trim71-201ENSMUST00000111816 Ryr3A2AGL3 4863 aa4.95□□□□□ -1.62
Trim71-201ENSMUST00000111816 Kmt2cQ8BRH4 4903 aa4.89□□□□□ -1.63
Trim71-201ENSMUST00000111816 Lrp2A2ARV4 4660 aa4.87□□□□□ -1.63
Trim71-201ENSMUST00000111816 Syne1Q6ZWR6 8799 aa4.86□□□□□ -1.63
Trim71-201ENSMUST00000111816 Krtap4-6Q3V4B7 195 aa4.76□□□□□ -1.65
Trim71-201ENSMUST00000111816 HydinQ80W93 5154 aa4.74□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 85.6 ms