RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Krtap8-1O08633 61 aa2.84□□□□□ -1.95
Scn8a-205ENSMUST00000108910 Dnah11E9Q7N9 4488 aa2.84□□□□□ -1.96
Scn8a-205ENSMUST00000108910 Krtap1-4Q3V2D6 188 aa2.82□□□□□ -1.96
Scn8a-205ENSMUST00000108910 ApobE9Q414 4505 aa2.82□□□□□ -1.96
Scn8a-205ENSMUST00000108910 Dnah6E9Q0B6 4144 aa2.82□□□□□ -1.96
Scn8a-205ENSMUST00000108910 LorP18165 486 aa2.8□□□□□ -1.96
Scn8a-205ENSMUST00000108910 PrkdcP97313 4128 aa2.8□□□□□ -1.96
Scn8a-205ENSMUST00000108910 Gm18596A0A1W2P860 280 aa2.8□□□□□ -1.96
Scn8a-205ENSMUST00000108910 Dnah5Q8VHE6 4621 aa2.79□□□□□ -1.96
Scn8a-205ENSMUST00000108910 CubnQ9JLB4 3623 aa2.79□□□□□ -1.96
Scn8a-205ENSMUST00000108910 Krtap19-9bQ99NG9 58 aa2.78□□□□□ -1.96
Scn8a-205ENSMUST00000108910 Kmt2aP55200 3966 aa2.78□□□□□ -1.96
Scn8a-205ENSMUST00000108910 Dync2h1Q45VK7 4306 aa2.77□□□□□ -1.97
Scn8a-205ENSMUST00000108910 Dnah9B1AR51 4484 aa2.77□□□□□ -1.97
Scn8a-205ENSMUST00000108910 Gm19402J3QJV4 266 aa2.75□□□□□ -1.97
Scn8a-205ENSMUST00000108910 Krtap12-1Q9Z287 130 aa2.73□□□□□ -1.97
Scn8a-205ENSMUST00000108910 Sprr2gO70558 76 aa2.73□□□□□ -1.97
Scn8a-205ENSMUST00000108910 Fras1Q80T14 4010 aa2.68□□□□□ -1.98
Scn8a-205ENSMUST00000108910 TnxbO35452 4006 aa2.68□□□□□ -1.98
Scn8a-205ENSMUST00000108910 PlecQ9QXS1 4691 aaKnown RBP2.68□□□□□ -1.98
Scn8a-205ENSMUST00000108910 Stard9Q80TF6 4561 aa2.68□□□□□ -1.98
Scn8a-205ENSMUST00000108910 Fat1A0A1L1SQU7 4645 aa2.67□□□□□ -1.98
Scn8a-205ENSMUST00000108910 Hectd4E9Q2E4 4418 aa2.65□□□□□ -1.98
Scn8a-205ENSMUST00000108910 Pkd1O08852 4293 aa2.61□□□□□ -1.99
Scn8a-205ENSMUST00000108910 SacsQ9JLC8 4582 aa2.59□□□□□ -2
Scn8a-205ENSMUST00000108910 Lce3bQ9CQM7 98 aa2.56□□□□□ -2
Scn8a-205ENSMUST00000108910 Pkhd1E9PZ36 4059 aa2.56□□□□□ -2
Scn8a-205ENSMUST00000108910 Ryr1E9PZQ0 5035 aa2.56□□□□□ -2
Scn8a-205ENSMUST00000108910 Dync1h1Q9JHU4 4644 aaKnown RBP2.55□□□□□ -2
Scn8a-205ENSMUST00000108910 Fat2Q5F226 4351 aa2.54□□□□□ -2
Scn8a-205ENSMUST00000108910 Lce1mQ9CR91 182 aa2.54□□□□□ -2
Scn8a-205ENSMUST00000108910 Lrp1bQ9JI18 4599 aa2.53□□□□□ -2
Scn8a-205ENSMUST00000108910 Krtap9-5A2A5X3 358 aa2.53□□□□□ -2
Scn8a-205ENSMUST00000108910 Pkhd1l1Q80ZA4 4249 aa2.52□□□□□ -2.01
Scn8a-205ENSMUST00000108910 Krtap16-3Q8C1I6 86 aa2.52□□□□□ -2.01
Scn8a-205ENSMUST00000108910 Gm10272F7CZ33 110 aa2.52□□□□□ -2.01
Scn8a-205ENSMUST00000108910 Krtap19-3Q925H6 87 aa2.51□□□□□ -2.01
Scn8a-205ENSMUST00000108910 Lce3cQ91V05 98 aa2.51□□□□□ -2.01
Scn8a-205ENSMUST00000108910 Gm10100J3QK64 120 aa2.5□□□□□ -2.01
Scn8a-205ENSMUST00000108910 Mycbp2Q7TPH6 4711 aa2.49□□□□□ -2.01
Scn8a-205ENSMUST00000108910 Dnah8Q91XQ0 4731 aa2.49□□□□□ -2.01
Scn8a-205ENSMUST00000108910 2310046K23RikA0A0A6YVW6 87 aa2.48□□□□□ -2.01
Scn8a-205ENSMUST00000108910 Gm38119A0A0A6YX29 146 aa2.46□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Krtap19-1Q925H2 87 aa2.44□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Lce3eF8VQJ0 98 aa2.44□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Lce3fQ6PAI4 98 aa2.44□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Gm10142J3KMP7 120 aa2.44□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Lce3dE9Q8V1 98 aa2.42□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Mt2P02798 61 aa2.42□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Fat3Q8BNA6 4555 aa2.42□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Sprr2iO70560 76 aa2.42□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Krtap22-2J3QNX6 67 aa2.41□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Lrp1Q91ZX7 4545 aaKnown RBP2.41□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Lce1jD3YUU5 139 aa2.4□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Lce1gQ9D195 139 aa2.4□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Lce1iQ9D6P5 149 aa2.4□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Lce1hQ9D6R3 140 aa2.4□□□□□ -2.02
Scn8a-205ENSMUST00000108910 Dnhd1D3Z2X2 4750 aa2.4□□□□□ -2.03
Scn8a-205ENSMUST00000108910 Prm1P02319 51 aa2.4□□□□□ -2.03
Scn8a-205ENSMUST00000108910 Lce3aQ497I5 98 aa2.38□□□□□ -2.03
Scn8a-205ENSMUST00000108910 Sprr2fO70557 76 aa2.37□□□□□ -2.03
Scn8a-205ENSMUST00000108910 Krtap19-2Q925I0 141 aa2.34□□□□□ -2.03
Scn8a-205ENSMUST00000108910 Ryr2E9Q401 4966 aaKnown RBP2.33□□□□□ -2.04
Scn8a-205ENSMUST00000108910 Krtap31-1Q9D644 177 aa2.33□□□□□ -2.04
Scn8a-205ENSMUST00000108910 PcloQ9QYX7 5068 aa2.31□□□□□ -2.04
Scn8a-205ENSMUST00000108910 Ryr3A2AGL3 4863 aa2.3□□□□□ -2.04
Scn8a-205ENSMUST00000108910 Gm7735D3YX18 52 aa2.29□□□□□ -2.04
Scn8a-205ENSMUST00000108910 Krtap1-3A2A588 173 aa2.29□□□□□ -2.04
Scn8a-205ENSMUST00000108910 Herc2Q4U2R1 4836 aa2.28□□□□□ -2.04
Scn8a-205ENSMUST00000108910 Kiaa1109A2AAE1 5005 aa2.28□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Lce1fB9EJP6 147 aa2.28□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Lce1cQ9D1C5 147 aa2.28□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Lce1lQ9D1G7 135 aa2.28□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Lce1dQ9D731 133 aa2.28□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Krtap31-2Q8CAY5 177 aa2.27□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Gm10024A0A0A0MQA4 119 aa2.27□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Lce1bQ9D149 137 aa2.26□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Gm9789Q8BIG3 52 aa2.25□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Herc1E9PZP8 4859 aa2.24□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Lce1eQ9D139 143 aa2.23□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Sprr2eO70556 76 aa2.23□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Mt3P28184 68 aa2.23□□□□□ -2.05
Scn8a-205ENSMUST00000108910 HydinQ80W93 5154 aa2.23□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Lrp2A2ARV4 4660 aa2.22□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Kmt2cQ8BRH4 4903 aa2.22□□□□□ -2.05
Scn8a-205ENSMUST00000108910 Gm10061D3Z714 54 aa2.21□□□□□ -2.06
Scn8a-205ENSMUST00000108910 Krtap9-3Q3V2C1 136 aa2.19□□□□□ -2.06
Scn8a-205ENSMUST00000108910 Gm11569B1AQB1 180 aa2.19□□□□□ -2.06
Scn8a-205ENSMUST00000108910 Krtap19-4Q925H7 84 aa2.18□□□□□ -2.06
Scn8a-205ENSMUST00000108910 Krtap4-2B1AQ85 167 aa2.15□□□□□ -2.07
Scn8a-205ENSMUST00000108910 Mt4P47945 62 aa2.15□□□□□ -2.07
Scn8a-205ENSMUST00000108910 Mdn1A2ANY6 5589 aaKnown RBP2.12□□□□□ -2.07
Scn8a-205ENSMUST00000108910 Birc6O88738 4882 aa2.1□□□□□ -2.07
Scn8a-205ENSMUST00000108910 Lce1a2Q9D1K4 149 aa2.09□□□□□ -2.08
Scn8a-205ENSMUST00000108910 Krtap4-6Q3V4B7 195 aa2.07□□□□□ -2.08
Scn8a-205ENSMUST00000108910 Krtap17-1A2A5X6 109 aa2.06□□□□□ -2.08
Scn8a-205ENSMUST00000108910 Gm11562A0PK51 136 aa2.05□□□□□ -2.08
Scn8a-205ENSMUST00000108910 Ubr4A2AN08 5180 aa2.03□□□□□ -2.08
Scn8a-205ENSMUST00000108910 ZanO88799 5376 aa2.01□□□□□ -2.09
Scn8a-205ENSMUST00000108910 4932415D10RikA0A1W2P6U8 4986 aa2.01□□□□□ -2.09
Retrieved 100 of 22,080 RNA–protein pairs in 59.9 ms