RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 LorP18165 486 aa4.77□□□□□ -1.65
Scn8a-203ENSMUST00000108908 Dnah5Q8VHE6 4621 aa4.76□□□□□ -1.65
Scn8a-203ENSMUST00000108908 Dnah2P0C6F1 4456 aa4.75□□□□□ -1.65
Scn8a-203ENSMUST00000108908 Sprr2a3Q4KL71 83 aa4.73□□□□□ -1.65
Scn8a-203ENSMUST00000108908 Sprr2a1Q9CQK8 83 aa4.73□□□□□ -1.65
Scn8a-203ENSMUST00000108908 Dnah9B1AR51 4484 aa4.72□□□□□ -1.65
Scn8a-203ENSMUST00000108908 ApobE9Q414 4505 aa4.7□□□□□ -1.66
Scn8a-203ENSMUST00000108908 Krtap8-1O08633 61 aa4.7□□□□□ -1.66
Scn8a-203ENSMUST00000108908 Krtap1-4Q3V2D6 188 aa4.69□□□□□ -1.66
Scn8a-203ENSMUST00000108908 Krtap7-1Q9D3I6 87 aa4.66□□□□□ -1.66
Scn8a-203ENSMUST00000108908 Fras1Q80T14 4010 aa4.61□□□□□ -1.67
Scn8a-203ENSMUST00000108908 Vps13bQ80TY5 3993 aa4.61□□□□□ -1.67
Scn8a-203ENSMUST00000108908 PlecQ9QXS1 4691 aaKnown RBP4.61□□□□□ -1.67
Scn8a-203ENSMUST00000108908 Sprr2kO70562 68 aa4.6□□□□□ -1.67
Scn8a-203ENSMUST00000108908 Gm19402J3QJV4 266 aa4.6□□□□□ -1.67
Scn8a-203ENSMUST00000108908 Dnah7cA0A087WR13 4024 aa4.58□□□□□ -1.68
Scn8a-203ENSMUST00000108908 Stard9Q80TF6 4561 aa4.57□□□□□ -1.68
Scn8a-203ENSMUST00000108908 Krtap19-9bQ99NG9 58 aa4.56□□□□□ -1.68
Scn8a-203ENSMUST00000108908 Krtap12-1Q9Z287 130 aa4.54□□□□□ -1.68
Scn8a-203ENSMUST00000108908 Pkd1O08852 4293 aa4.54□□□□□ -1.68
Scn8a-203ENSMUST00000108908 Dnah7aE9Q0T8 4024 aa4.53□□□□□ -1.68
Scn8a-203ENSMUST00000108908 Hectd4E9Q2E4 4418 aa4.46□□□□□ -1.7
Scn8a-203ENSMUST00000108908 Lce1mQ9CR91 182 aa4.46□□□□□ -1.7
Scn8a-203ENSMUST00000108908 SacsQ9JLC8 4582 aa4.45□□□□□ -1.7
Scn8a-203ENSMUST00000108908 Lrp1bQ9JI18 4599 aa4.42□□□□□ -1.7
Scn8a-203ENSMUST00000108908 Fat2Q5F226 4351 aa4.37□□□□□ -1.71
Scn8a-203ENSMUST00000108908 Dync1h1Q9JHU4 4644 aaKnown RBP4.36□□□□□ -1.71
Scn8a-203ENSMUST00000108908 Fat1A0A1L1SQU7 4645 aa4.33□□□□□ -1.72
Scn8a-203ENSMUST00000108908 Sprr2gO70558 76 aa4.32□□□□□ -1.72
Scn8a-203ENSMUST00000108908 Krtap9-5A2A5X3 358 aa4.32□□□□□ -1.72
Scn8a-203ENSMUST00000108908 Krtap16-3Q8C1I6 86 aa4.32□□□□□ -1.72
Scn8a-203ENSMUST00000108908 Mycbp2Q7TPH6 4711 aa4.3□□□□□ -1.72
Scn8a-203ENSMUST00000108908 Krtap19-3Q925H6 87 aa4.29□□□□□ -1.72
Scn8a-203ENSMUST00000108908 Lrp1Q91ZX7 4545 aaKnown RBP4.29□□□□□ -1.72
Scn8a-203ENSMUST00000108908 Lce3bQ9CQM7 98 aa4.21□□□□□ -1.74
Scn8a-203ENSMUST00000108908 Gm10272F7CZ33 110 aa4.18□□□□□ -1.74
Scn8a-203ENSMUST00000108908 Fat3Q8BNA6 4555 aa4.18□□□□□ -1.74
Scn8a-203ENSMUST00000108908 Krtap19-1Q925H2 87 aa4.15□□□□□ -1.74
Scn8a-203ENSMUST00000108908 Prm1P02319 51 aa4.13□□□□□ -1.75
Scn8a-203ENSMUST00000108908 Lce3cQ91V05 98 aa4.12□□□□□ -1.75
Scn8a-203ENSMUST00000108908 Pkhd1E9PZ36 4059 aa4.1□□□□□ -1.75
Scn8a-203ENSMUST00000108908 Krtap1-3A2A588 173 aa4.06□□□□□ -1.76
Scn8a-203ENSMUST00000108908 Gm38119A0A0A6YX29 146 aa4.05□□□□□ -1.76
Scn8a-203ENSMUST00000108908 Dnah8Q91XQ0 4731 aa4.04□□□□□ -1.76
Scn8a-203ENSMUST00000108908 Pkhd1l1Q80ZA4 4249 aa4.03□□□□□ -1.76
Scn8a-203ENSMUST00000108908 Mt2P02798 61 aa4.03□□□□□ -1.76
Scn8a-203ENSMUST00000108908 Gm10100J3QK64 120 aa4.03□□□□□ -1.76
Scn8a-203ENSMUST00000108908 Gm7735D3YX18 52 aa4.01□□□□□ -1.77
Scn8a-203ENSMUST00000108908 Lce3eF8VQJ0 98 aa4□□□□□ -1.77
Scn8a-203ENSMUST00000108908 Lce3fQ6PAI4 98 aa4□□□□□ -1.77
Scn8a-203ENSMUST00000108908 2310046K23RikA0A0A6YVW6 87 aa3.99□□□□□ -1.77
Scn8a-203ENSMUST00000108908 Sprr2iO70560 76 aa3.99□□□□□ -1.77
Scn8a-203ENSMUST00000108908 Krtap22-2J3QNX6 67 aa3.98□□□□□ -1.77
Scn8a-203ENSMUST00000108908 Lce3dE9Q8V1 98 aa3.97□□□□□ -1.77
Scn8a-203ENSMUST00000108908 Krtap19-2Q925I0 141 aa3.97□□□□□ -1.77
Scn8a-203ENSMUST00000108908 Ryr1E9PZQ0 5035 aa3.97□□□□□ -1.77
Scn8a-203ENSMUST00000108908 Gm9789Q8BIG3 52 aa3.96□□□□□ -1.78
Scn8a-203ENSMUST00000108908 Lce1jD3YUU5 139 aa3.95□□□□□ -1.78
Scn8a-203ENSMUST00000108908 Gm10142J3KMP7 120 aa3.92□□□□□ -1.78
Scn8a-203ENSMUST00000108908 Lrp2A2ARV4 4660 aa3.89□□□□□ -1.79
Scn8a-203ENSMUST00000108908 Lce1gQ9D195 139 aa3.89□□□□□ -1.79
Scn8a-203ENSMUST00000108908 Lce1iQ9D6P5 149 aa3.89□□□□□ -1.79
Scn8a-203ENSMUST00000108908 Lce1hQ9D6R3 140 aa3.89□□□□□ -1.79
Scn8a-203ENSMUST00000108908 Lce3aQ497I5 98 aa3.86□□□□□ -1.79
Scn8a-203ENSMUST00000108908 Ryr3A2AGL3 4863 aa3.86□□□□□ -1.79
Scn8a-203ENSMUST00000108908 Gm11569B1AQB1 180 aa3.83□□□□□ -1.8
Scn8a-203ENSMUST00000108908 Gm10061D3Z714 54 aa3.82□□□□□ -1.8
Scn8a-203ENSMUST00000108908 Lce1bQ9D149 137 aa3.78□□□□□ -1.81
Scn8a-203ENSMUST00000108908 Ryr2E9Q401 4966 aaKnown RBP3.76□□□□□ -1.81
Scn8a-203ENSMUST00000108908 Lce1fB9EJP6 147 aa3.76□□□□□ -1.81
Scn8a-203ENSMUST00000108908 Lce1cQ9D1C5 147 aa3.76□□□□□ -1.81
Scn8a-203ENSMUST00000108908 Lce1lQ9D1G7 135 aa3.76□□□□□ -1.81
Scn8a-203ENSMUST00000108908 Lce1dQ9D731 133 aa3.76□□□□□ -1.81
Scn8a-203ENSMUST00000108908 Kmt2cQ8BRH4 4903 aa3.7□□□□□ -1.82
Scn8a-203ENSMUST00000108908 Lce1eQ9D139 143 aa3.69□□□□□ -1.82
Scn8a-203ENSMUST00000108908 Dnhd1D3Z2X2 4750 aa3.68□□□□□ -1.82
Scn8a-203ENSMUST00000108908 Mt4P47945 62 aa3.68□□□□□ -1.82
Scn8a-203ENSMUST00000108908 Gm10024A0A0A0MQA4 119 aa3.66□□□□□ -1.82
Scn8a-203ENSMUST00000108908 Sprr2fO70557 76 aa3.65□□□□□ -1.83
Scn8a-203ENSMUST00000108908 Herc2Q4U2R1 4836 aa3.65□□□□□ -1.83
Scn8a-203ENSMUST00000108908 Krtap4-2B1AQ85 167 aa3.64□□□□□ -1.83
Scn8a-203ENSMUST00000108908 Krtap4-6Q3V4B7 195 aa3.62□□□□□ -1.83
Scn8a-203ENSMUST00000108908 Sprr2eO70556 76 aa3.61□□□□□ -1.83
Scn8a-203ENSMUST00000108908 Lce1a2Q9D1K4 149 aa3.59□□□□□ -1.84
Scn8a-203ENSMUST00000108908 Krtap9-3Q3V2C1 136 aa3.59□□□□□ -1.84
Scn8a-203ENSMUST00000108908 Krtap19-4Q925H7 84 aa3.54□□□□□ -1.84
Scn8a-203ENSMUST00000108908 Krtap17-1A2A5X6 109 aa3.47□□□□□ -1.85
Scn8a-203ENSMUST00000108908 Kiaa1109A2AAE1 5005 aa3.46□□□□□ -1.86
Scn8a-203ENSMUST00000108908 Krtap4-1Q3UUY3 169 aa3.46□□□□□ -1.86
Scn8a-203ENSMUST00000108908 Gm11596B1AQB0 205 aa3.41□□□□□ -1.86
Scn8a-203ENSMUST00000108908 2300003K06RikA2A4M0 262 aa3.39□□□□□ -1.87
Scn8a-203ENSMUST00000108908 PcloQ9QYX7 5068 aa3.39□□□□□ -1.87
Scn8a-203ENSMUST00000108908 Gm11564A2A4L9 201 aa3.38□□□□□ -1.87
Scn8a-203ENSMUST00000108908 Gm11563B1AQ90 168 aa3.38□□□□□ -1.87
Scn8a-203ENSMUST00000108908 Gm11595B1AQA7 289 aa3.38□□□□□ -1.87
Scn8a-203ENSMUST00000108908 Krtap4-8B1AQA8 209 aa3.38□□□□□ -1.87
Scn8a-203ENSMUST00000108908 Herc1E9PZP8 4859 aa3.37□□□□□ -1.87
Scn8a-203ENSMUST00000108908 Abca13Q5SSE9 5034 aa3.37□□□□□ -1.87
Scn8a-203ENSMUST00000108908 HydinQ80W93 5154 aa3.36□□□□□ -1.87
Scn8a-203ENSMUST00000108908 Krtap4-9B1AQA9 244 aa3.35□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 88.3 ms