RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Hspg2Q05793 3707 aaKnown RBP2.92□□□□□ -1.94
Scn3a-202ENSMUST00000100069 CubnQ9JLB4 3623 aa2.88□□□□□ -1.95
Scn3a-202ENSMUST00000100069 Huwe1Q7TMY8 4377 aaKnown RBP2.86□□□□□ -1.95
Scn3a-202ENSMUST00000100069 Krtap1-4Q3V2D6 188 aa2.84□□□□□ -1.95
Scn3a-202ENSMUST00000100069 Dnah3Q8BW94 4083 aa2.83□□□□□ -1.96
Scn3a-202ENSMUST00000100069 Sprr2kO70562 68 aa2.83□□□□□ -1.96
Scn3a-202ENSMUST00000100069 Dnah7bL7N1Y0 4068 aa2.8□□□□□ -1.96
Scn3a-202ENSMUST00000100069 Gm18596A0A1W2P860 280 aa2.79□□□□□ -1.96
Scn3a-202ENSMUST00000100069 Krtap12-1Q9Z287 130 aa2.77□□□□□ -1.97
Scn3a-202ENSMUST00000100069 Sprr2gO70558 76 aa2.76□□□□□ -1.97
Scn3a-202ENSMUST00000100069 Kmt2aP55200 3966 aa2.72□□□□□ -1.97
Scn3a-202ENSMUST00000100069 Gm19402J3QJV4 266 aa2.72□□□□□ -1.97
Scn3a-202ENSMUST00000100069 Dnah10D3YYQ8 4591 aa2.69□□□□□ -1.98
Scn3a-202ENSMUST00000100069 Dnah14A0A140LIJ4 4489 aa2.68□□□□□ -1.98
Scn3a-202ENSMUST00000100069 Vps13bQ80TY5 3993 aa2.67□□□□□ -1.98
Scn3a-202ENSMUST00000100069 PrkdcP97313 4128 aa2.65□□□□□ -1.98
Scn3a-202ENSMUST00000100069 Lce3bQ9CQM7 98 aa2.65□□□□□ -1.99
Scn3a-202ENSMUST00000100069 A0A286YCP9 139 aa2.64□□□□□ -1.99
Scn3a-202ENSMUST00000100069 LorP18165 486 aa2.64□□□□□ -1.99
Scn3a-202ENSMUST00000100069 Dnah7cA0A087WR13 4024 aa2.63□□□□□ -1.99
Scn3a-202ENSMUST00000100069 Dnah6E9Q0B6 4144 aa2.63□□□□□ -1.99
Scn3a-202ENSMUST00000100069 Vps13dB1ART2 4390 aa2.62□□□□□ -1.99
Scn3a-202ENSMUST00000100069 TnxbO35452 4006 aa2.62□□□□□ -1.99
Scn3a-202ENSMUST00000100069 Dnah1E9Q8T7 4250 aa2.61□□□□□ -1.99
Scn3a-202ENSMUST00000100069 Dnah17Q69Z23 4481 aa2.61□□□□□ -1.99
Scn3a-202ENSMUST00000100069 Dnah5Q8VHE6 4621 aa2.6□□□□□ -1.99
Scn3a-202ENSMUST00000100069 Dnah7aE9Q0T8 4024 aa2.6□□□□□ -1.99
Scn3a-202ENSMUST00000100069 PcloQ9QYX7 5068 aa2.6□□□□□ -1.99
Scn3a-202ENSMUST00000100069 Gm10100J3QK64 120 aa2.59□□□□□ -1.99
Scn3a-202ENSMUST00000100069 Lce3cQ91V05 98 aa2.59□□□□□ -1.99
Scn3a-202ENSMUST00000100069 2310046K23RikA0A0A6YVW6 87 aa2.59□□□□□ -2
Scn3a-202ENSMUST00000100069 Dnah11E9Q7N9 4488 aa2.58□□□□□ -2
Scn3a-202ENSMUST00000100069 Dync2h1Q45VK7 4306 aa2.56□□□□□ -2
Scn3a-202ENSMUST00000100069 Gm10142J3KMP7 120 aa2.55□□□□□ -2
Scn3a-202ENSMUST00000100069 Lce3dE9Q8V1 98 aa2.55□□□□□ -2
Scn3a-202ENSMUST00000100069 Dnah2P0C6F1 4456 aa2.54□□□□□ -2
Scn3a-202ENSMUST00000100069 Gm10272F7CZ33 110 aa2.54□□□□□ -2
Scn3a-202ENSMUST00000100069 Fras1Q80T14 4010 aa2.53□□□□□ -2
Scn3a-202ENSMUST00000100069 Lce3eF8VQJ0 98 aa2.52□□□□□ -2.01
Scn3a-202ENSMUST00000100069 Lce3fQ6PAI4 98 aa2.52□□□□□ -2.01
Scn3a-202ENSMUST00000100069 Hectd4E9Q2E4 4418 aa2.52□□□□□ -2.01
Scn3a-202ENSMUST00000100069 Sprr2iO70560 76 aa2.48□□□□□ -2.01
Scn3a-202ENSMUST00000100069 Lce3aQ497I5 98 aa2.47□□□□□ -2.01
Scn3a-202ENSMUST00000100069 ApobE9Q414 4505 aa2.46□□□□□ -2.02
Scn3a-202ENSMUST00000100069 Lce1mQ9CR91 182 aa2.45□□□□□ -2.02
Scn3a-202ENSMUST00000100069 Krtap16-3Q8C1I6 86 aa2.44□□□□□ -2.02
Scn3a-202ENSMUST00000100069 Dnah9B1AR51 4484 aa2.44□□□□□ -2.02
Scn3a-202ENSMUST00000100069 PlecQ9QXS1 4691 aaKnown RBP2.43□□□□□ -2.02
Scn3a-202ENSMUST00000100069 Krtap9-5A2A5X3 358 aa2.43□□□□□ -2.02
Scn3a-202ENSMUST00000100069 Krtap22-2J3QNX6 67 aa2.42□□□□□ -2.02
Scn3a-202ENSMUST00000100069 Pkd1O08852 4293 aa2.41□□□□□ -2.02
Scn3a-202ENSMUST00000100069 Stard9Q80TF6 4561 aa2.41□□□□□ -2.02
Scn3a-202ENSMUST00000100069 Prm1P02319 51 aa2.41□□□□□ -2.02
Scn3a-202ENSMUST00000100069 Gm10024A0A0A0MQA4 119 aa2.4□□□□□ -2.02
Scn3a-202ENSMUST00000100069 Ubr4A2AN08 5180 aa2.39□□□□□ -2.03
Scn3a-202ENSMUST00000100069 Krtap19-3Q925H6 87 aa2.39□□□□□ -2.03
Scn3a-202ENSMUST00000100069 Sprr2fO70557 76 aa2.38□□□□□ -2.03
Scn3a-202ENSMUST00000100069 SacsQ9JLC8 4582 aa2.38□□□□□ -2.03
Scn3a-202ENSMUST00000100069 Krtap31-1Q9D644 177 aa2.38□□□□□ -2.03
Scn3a-202ENSMUST00000100069 Mt2P02798 61 aa2.37□□□□□ -2.03
Scn3a-202ENSMUST00000100069 Lrp1bQ9JI18 4599 aa2.36□□□□□ -2.03
Scn3a-202ENSMUST00000100069 Krtap19-4Q925H7 84 aa2.36□□□□□ -2.03
Scn3a-202ENSMUST00000100069 Dync1h1Q9JHU4 4644 aaKnown RBP2.35□□□□□ -2.03
Scn3a-202ENSMUST00000100069 Lrp1Q91ZX7 4545 aaKnown RBP2.34□□□□□ -2.03
Scn3a-202ENSMUST00000100069 Fat2Q5F226 4351 aa2.32□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Krtap19-1Q925H2 87 aa2.31□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Fat1A0A1L1SQU7 4645 aa2.31□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Sprr2eO70556 76 aa2.31□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Ryr2E9Q401 4966 aaKnown RBP2.31□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Dnah8Q91XQ0 4731 aa2.3□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Pkhd1E9PZ36 4059 aa2.3□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Krtap31-2Q8CAY5 177 aa2.29□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Lce1fB9EJP6 147 aa2.29□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Lce1cQ9D1C5 147 aa2.29□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Lce1lQ9D1G7 135 aa2.29□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Lce1dQ9D731 133 aa2.29□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Gm38119A0A0A6YX29 146 aa2.29□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Pkhd1l1Q80ZA4 4249 aa2.28□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Lce1jD3YUU5 139 aa2.28□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Lce1gQ9D195 139 aa2.28□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Lce1iQ9D6P5 149 aa2.28□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Lce1hQ9D6R3 140 aa2.28□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Krtap19-2Q925I0 141 aa2.28□□□□□ -2.04
Scn3a-202ENSMUST00000100069 Lce1bQ9D149 137 aa2.28□□□□□ -2.05
Scn3a-202ENSMUST00000100069 Mycbp2Q7TPH6 4711 aa2.27□□□□□ -2.05
Scn3a-202ENSMUST00000100069 Krtap9-3Q3V2C1 136 aa2.27□□□□□ -2.05
Scn3a-202ENSMUST00000100069 Lce1eQ9D139 143 aa2.26□□□□□ -2.05
Scn3a-202ENSMUST00000100069 HydinQ80W93 5154 aa2.25□□□□□ -2.05
Scn3a-202ENSMUST00000100069 Gm7735D3YX18 52 aa2.23□□□□□ -2.05
Scn3a-202ENSMUST00000100069 Fat3Q8BNA6 4555 aa2.21□□□□□ -2.06
Scn3a-202ENSMUST00000100069 Mt3P28184 68 aa2.2□□□□□ -2.06
Scn3a-202ENSMUST00000100069 Gm9789Q8BIG3 52 aa2.19□□□□□ -2.06
Scn3a-202ENSMUST00000100069 Sprr2hO70559 108 aa2.18□□□□□ -2.06
Scn3a-202ENSMUST00000100069 Krtap4-1Q3UUY3 169 aa2.18□□□□□ -2.06
Scn3a-202ENSMUST00000100069 Abca13Q5SSE9 5034 aa2.17□□□□□ -2.06
Scn3a-202ENSMUST00000100069 Dnhd1D3Z2X2 4750 aa2.16□□□□□ -2.06
Scn3a-202ENSMUST00000100069 Krtap17-1A2A5X6 109 aa2.15□□□□□ -2.07
Scn3a-202ENSMUST00000100069 Krtap1-3A2A588 173 aa2.14□□□□□ -2.07
Scn3a-202ENSMUST00000100069 Gm10061D3Z714 54 aa2.12□□□□□ -2.07
Scn3a-202ENSMUST00000100069 Gm11569B1AQB1 180 aa2.1□□□□□ -2.07
Retrieved 100 of 22,080 RNA–protein pairs in 203 ms