RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Krtap19-9aF8WH65 55 aa2.41□□□□□ -2.02
Ubr4-201ENSMUST00000097822 PlecQ9QXS1 4691 aaKnown RBP2.41□□□□□ -2.02
Ubr4-201ENSMUST00000097822 Krtap12-1Q9Z287 130 aa2.4□□□□□ -2.02
Ubr4-201ENSMUST00000097822 Dnah7bL7N1Y0 4068 aa2.37□□□□□ -2.03
Ubr4-201ENSMUST00000097822 Vps13dB1ART2 4390 aa2.37□□□□□ -2.03
Ubr4-201ENSMUST00000097822 Dnah5Q8VHE6 4621 aa2.37□□□□□ -2.03
Ubr4-201ENSMUST00000097822 Sprr2kO70562 68 aa2.37□□□□□ -2.03
Ubr4-201ENSMUST00000097822 Dnah8Q91XQ0 4731 aa2.35□□□□□ -2.03
Ubr4-201ENSMUST00000097822 Stard9Q80TF6 4561 aa2.34□□□□□ -2.03
Ubr4-201ENSMUST00000097822 Dnah9B1AR51 4484 aa2.34□□□□□ -2.04
Ubr4-201ENSMUST00000097822 Lrp1bQ9JI18 4599 aa2.33□□□□□ -2.04
Ubr4-201ENSMUST00000097822 TnxbO35452 4006 aa2.32□□□□□ -2.04
Ubr4-201ENSMUST00000097822 2310046K23RikA0A0A6YVW6 87 aa2.31□□□□□ -2.04
Ubr4-201ENSMUST00000097822 Fat3Q8BNA6 4555 aa2.3□□□□□ -2.04
Ubr4-201ENSMUST00000097822 Dnah3Q8BW94 4083 aa2.29□□□□□ -2.04
Ubr4-201ENSMUST00000097822 Krtap8-1O08633 61 aa2.28□□□□□ -2.04
Ubr4-201ENSMUST00000097822 Dync1h1Q9JHU4 4644 aaKnown RBP2.27□□□□□ -2.05
Ubr4-201ENSMUST00000097822 PrkdcP97313 4128 aa2.27□□□□□ -2.05
Ubr4-201ENSMUST00000097822 Kmt2aP55200 3966 aa2.26□□□□□ -2.05
Ubr4-201ENSMUST00000097822 Fat1A0A1L1SQU7 4645 aa2.25□□□□□ -2.05
Ubr4-201ENSMUST00000097822 Lrp1Q91ZX7 4545 aaKnown RBP2.25□□□□□ -2.05
Ubr4-201ENSMUST00000097822 Gm10100J3QK64 120 aa2.24□□□□□ -2.05
Ubr4-201ENSMUST00000097822 Dnah1E9Q8T7 4250 aa2.23□□□□□ -2.05
Ubr4-201ENSMUST00000097822 Vps13bQ80TY5 3993 aa2.22□□□□□ -2.05
Ubr4-201ENSMUST00000097822 Dnah6E9Q0B6 4144 aa2.21□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Sprr2gO70558 76 aa2.21□□□□□ -2.06
Ubr4-201ENSMUST00000097822 LorP18165 486 aa2.2□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Fat2Q5F226 4351 aa2.2□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Dnah7cA0A087WR13 4024 aa2.2□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Gm10272F7CZ33 110 aa2.18□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Mycbp2Q7TPH6 4711 aa2.18□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Krtap31-1Q9D644 177 aa2.18□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Gm10142J3KMP7 120 aa2.18□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Krtap16-3Q8C1I6 86 aa2.17□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Pkhd1l1Q80ZA4 4249 aa2.17□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Ryr1E9PZQ0 5035 aa2.15□□□□□ -2.06
Ubr4-201ENSMUST00000097822 Lce3bQ9CQM7 98 aa2.15□□□□□ -2.07
Ubr4-201ENSMUST00000097822 Fras1Q80T14 4010 aa2.14□□□□□ -2.07
Ubr4-201ENSMUST00000097822 Lce3cQ91V05 98 aa2.13□□□□□ -2.07
Ubr4-201ENSMUST00000097822 Dync2h1Q45VK7 4306 aa2.13□□□□□ -2.07
Ubr4-201ENSMUST00000097822 Dnah7aE9Q0T8 4024 aa2.13□□□□□ -2.07
Ubr4-201ENSMUST00000097822 Pkd1O08852 4293 aa2.13□□□□□ -2.07
Ubr4-201ENSMUST00000097822 Krtap19-3Q925H6 87 aa2.12□□□□□ -2.07
Ubr4-201ENSMUST00000097822 HydinQ80W93 5154 aa2.09□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Krtap19-1Q925H2 87 aa2.08□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Herc1E9PZP8 4859 aa2.08□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Krtap9-3Q3V2C1 136 aa2.06□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Lce3dE9Q8V1 98 aa2.06□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Krtap9-5A2A5X3 358 aa2.05□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Ryr3A2AGL3 4863 aa2.05□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Lce1jD3YUU5 139 aa2.04□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Lce3eF8VQJ0 98 aa2.04□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Lce3fQ6PAI4 98 aa2.04□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Mdn1A2ANY6 5589 aaKnown RBP2.04□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Krtap31-2Q8CAY5 177 aa2.03□□□□□ -2.08
Ubr4-201ENSMUST00000097822 Krtap22-2J3QNX6 67 aa2.03□□□□□ -2.09
Ubr4-201ENSMUST00000097822 Lce3aQ497I5 98 aa2.02□□□□□ -2.09
Ubr4-201ENSMUST00000097822 Pkhd1E9PZ36 4059 aa2.02□□□□□ -2.09
Ubr4-201ENSMUST00000097822 Mt2P02798 61 aa1.99□□□□□ -2.09
Ubr4-201ENSMUST00000097822 Lce1gQ9D195 139 aa1.99□□□□□ -2.09
Ubr4-201ENSMUST00000097822 Lce1iQ9D6P5 149 aa1.99□□□□□ -2.09
Ubr4-201ENSMUST00000097822 Lce1hQ9D6R3 140 aa1.99□□□□□ -2.09
Ubr4-201ENSMUST00000097822 Birc6O88738 4882 aa1.99□□□□□ -2.09
Ubr4-201ENSMUST00000097822 Dnhd1D3Z2X2 4750 aa1.98□□□□□ -2.09
Ubr4-201ENSMUST00000097822 Sprr2fO70557 76 aa1.97□□□□□ -2.09
Ubr4-201ENSMUST00000097822 Gm10024A0A0A0MQA4 119 aa1.96□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Herc2Q4U2R1 4836 aa1.96□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Lrp2A2ARV4 4660 aa1.96□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Kmt2cQ8BRH4 4903 aa1.96□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Krtap19-4Q925H7 84 aa1.94□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Ubr4A2AN08 5180 aa1.94□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Sprr2iO70560 76 aa1.94□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Krtap19-2Q925I0 141 aa1.94□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Syne1Q6ZWR6 8799 aa1.93□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Gm11938Q9D3H4 131 aa1.93□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Sprr2eO70556 76 aa1.92□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Gm38119A0A0A6YX29 146 aa1.92□□□□□ -2.1
Ubr4-201ENSMUST00000097822 PcloQ9QYX7 5068 aa1.92□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Ryr2E9Q401 4966 aaKnown RBP1.91□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Abca13Q5SSE9 5034 aa1.91□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Kiaa1109A2AAE1 5005 aa1.91□□□□□ -2.1
Ubr4-201ENSMUST00000097822 Lce1mQ9CR91 182 aa1.9□□□□□ -2.11
Ubr4-201ENSMUST00000097822 Sprr2dO70555 85 aa1.89□□□□□ -2.11
Ubr4-201ENSMUST00000097822 Krtap1-3A2A588 173 aa1.86□□□□□ -2.11
Ubr4-201ENSMUST00000097822 Lce1dQ9D731 133 aa1.86□□□□□ -2.11
Ubr4-201ENSMUST00000097822 Lce1a2Q9D1K4 149 aa1.85□□□□□ -2.11
Ubr4-201ENSMUST00000097822 Sprr2hO70559 108 aa1.85□□□□□ -2.11
Ubr4-201ENSMUST00000097822 Rnf213E9Q555 5152 aaKnown RBP1.84□□□□□ -2.12
Ubr4-201ENSMUST00000097822 Lce1eQ9D139 143 aa1.82□□□□□ -2.12
Ubr4-201ENSMUST00000097822 Krtap4-16Q91W93 202 aa1.82□□□□□ -2.12
Ubr4-201ENSMUST00000097822 Lce1fB9EJP6 147 aa1.82□□□□□ -2.12
Ubr4-201ENSMUST00000097822 Lce1cQ9D1C5 147 aa1.82□□□□□ -2.12
Ubr4-201ENSMUST00000097822 Lce1lQ9D1G7 135 aa1.82□□□□□ -2.12
Ubr4-201ENSMUST00000097822 Lce1bQ9D149 137 aa1.81□□□□□ -2.12
Ubr4-201ENSMUST00000097822 Prm1P02319 51 aa1.8□□□□□ -2.12
Ubr4-201ENSMUST00000097822 Kmt2dQ6PDK2 5588 aa1.78□□□□□ -2.13
Ubr4-201ENSMUST00000097822 Gpr98Q8VHN7 6298 aaKnown RBP1.75□□□□□ -2.13
Ubr4-201ENSMUST00000097822 Krtap17-1A2A5X6 109 aa1.74□□□□□ -2.13
Ubr4-201ENSMUST00000097822 Syne2Q6ZWQ0 6874 aaKnown RBP1.73□□□□□ -2.13
Ubr4-201ENSMUST00000097822 Gm9789Q8BIG3 52 aa1.73□□□□□ -2.13
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms