RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 TnxbO35452 4006 aa6.49□□□□□ -1.37
Clcn3-203ENSMUST00000093490 Dync1h1Q9JHU4 4644 aaKnown RBP6.45□□□□□ -1.38
Clcn3-203ENSMUST00000093490 Dnah1E9Q8T7 4250 aa6.39□□□□□ -1.39
Clcn3-203ENSMUST00000093490 Dnah3Q8BW94 4083 aa6.38□□□□□ -1.39
Clcn3-203ENSMUST00000093490 Pkd1O08852 4293 aa6.38□□□□□ -1.39
Clcn3-203ENSMUST00000093490 PrkdcP97313 4128 aa6.36□□□□□ -1.39
Clcn3-203ENSMUST00000093490 Prm1P02319 51 aa6.34□□□□□ -1.39
Clcn3-203ENSMUST00000093490 Dnah2P0C6F1 4456 aa6.33□□□□□ -1.4
Clcn3-203ENSMUST00000093490 LystP97412 3788 aa6.31□□□□□ -1.4
Clcn3-203ENSMUST00000093490 ApobE9Q414 4505 aa6.27□□□□□ -1.41
Clcn3-203ENSMUST00000093490 CubnQ9JLB4 3623 aa6.23□□□□□ -1.41
Clcn3-203ENSMUST00000093490 Sprr2gO70558 76 aa6.23□□□□□ -1.41
Clcn3-203ENSMUST00000093490 Ryr1E9PZQ0 5035 aa6.21□□□□□ -1.42
Clcn3-203ENSMUST00000093490 Fat1A0A1L1SQU7 4645 aa6.2□□□□□ -1.42
Clcn3-203ENSMUST00000093490 SacsQ9JLC8 4582 aa6.2□□□□□ -1.42
Clcn3-203ENSMUST00000093490 Dnah11E9Q7N9 4488 aa6.19□□□□□ -1.42
Clcn3-203ENSMUST00000093490 Dnah9B1AR51 4484 aa6.18□□□□□ -1.42
Clcn3-203ENSMUST00000093490 Dnah8Q91XQ0 4731 aa6.16□□□□□ -1.42
Clcn3-203ENSMUST00000093490 Dnah7bL7N1Y0 4068 aa6.13□□□□□ -1.43
Clcn3-203ENSMUST00000093490 Krtap19-3Q925H6 87 aa6.12□□□□□ -1.43
Clcn3-203ENSMUST00000093490 Fras1Q80T14 4010 aa6.11□□□□□ -1.43
Clcn3-203ENSMUST00000093490 Krtap16-3Q8C1I6 86 aa6.1□□□□□ -1.43
Clcn3-203ENSMUST00000093490 BsnO88737 3942 aa6.08□□□□□ -1.44
Clcn3-203ENSMUST00000093490 Krtap9-5A2A5X3 358 aa6.06□□□□□ -1.44
Clcn3-203ENSMUST00000093490 Lrp1bQ9JI18 4599 aa6.06□□□□□ -1.44
Clcn3-203ENSMUST00000093490 Dnhd1D3Z2X2 4750 aa6.03□□□□□ -1.44
Clcn3-203ENSMUST00000093490 Krtap19-1Q925H2 87 aa6.01□□□□□ -1.45
Clcn3-203ENSMUST00000093490 Gm7735D3YX18 52 aa6.01□□□□□ -1.45
Clcn3-203ENSMUST00000093490 Hectd4E9Q2E4 4418 aa6.01□□□□□ -1.45
Clcn3-203ENSMUST00000093490 Mycbp2Q7TPH6 4711 aa5.99□□□□□ -1.45
Clcn3-203ENSMUST00000093490 Xirp2Q4U4S6 3784 aa5.98□□□□□ -1.45
Clcn3-203ENSMUST00000093490 Ryr2E9Q401 4966 aaKnown RBP5.98□□□□□ -1.45
Clcn3-203ENSMUST00000093490 Herc1E9PZP8 4859 aa5.95□□□□□ -1.46
Clcn3-203ENSMUST00000093490 Hspg2Q05793 3707 aaKnown RBP5.94□□□□□ -1.46
Clcn3-203ENSMUST00000093490 Fat3Q8BNA6 4555 aa5.93□□□□□ -1.46
Clcn3-203ENSMUST00000093490 Lce3bQ9CQM7 98 aa5.91□□□□□ -1.46
Clcn3-203ENSMUST00000093490 2310046K23RikA0A0A6YVW6 87 aa5.88□□□□□ -1.47
Clcn3-203ENSMUST00000093490 Gm9789Q8BIG3 52 aa5.87□□□□□ -1.47
Clcn3-203ENSMUST00000093490 Dnah6E9Q0B6 4144 aa5.84□□□□□ -1.47
Clcn3-203ENSMUST00000093490 Krtap22-2J3QNX6 67 aa5.81□□□□□ -1.48
Clcn3-203ENSMUST00000093490 Csmd3Q80T79 3707 aa5.79□□□□□ -1.48
Clcn3-203ENSMUST00000093490 Ryr3A2AGL3 4863 aa5.76□□□□□ -1.49
Clcn3-203ENSMUST00000093490 Mt2P02798 61 aa5.75□□□□□ -1.49
Clcn3-203ENSMUST00000093490 Dnah7aE9Q0T8 4024 aa5.75□□□□□ -1.49
Clcn3-203ENSMUST00000093490 Kmt2aP55200 3966 aa5.74□□□□□ -1.49
Clcn3-203ENSMUST00000093490 Lce3cQ91V05 98 aa5.73□□□□□ -1.49
Clcn3-203ENSMUST00000093490 Krtap1-3A2A588 173 aa5.73□□□□□ -1.49
Clcn3-203ENSMUST00000093490 Lrp1Q91ZX7 4545 aaKnown RBP5.73□□□□□ -1.49
Clcn3-203ENSMUST00000093490 Gm10100J3QK64 120 aa5.71□□□□□ -1.5
Clcn3-203ENSMUST00000093490 Krtap19-2Q925I0 141 aa5.71□□□□□ -1.5
Clcn3-203ENSMUST00000093490 Herc2Q4U2R1 4836 aa5.68□□□□□ -1.5
Clcn3-203ENSMUST00000093490 Kiaa1109A2AAE1 5005 aa5.68□□□□□ -1.5
Clcn3-203ENSMUST00000093490 Gm10272F7CZ33 110 aa5.67□□□□□ -1.5
Clcn3-203ENSMUST00000093490 Dnah7cA0A087WR13 4024 aa5.67□□□□□ -1.5
Clcn3-203ENSMUST00000093490 Sprr2iO70560 76 aa5.63□□□□□ -1.51
Clcn3-203ENSMUST00000093490 Gm10142J3KMP7 120 aa5.62□□□□□ -1.51
Clcn3-203ENSMUST00000093490 Gm10061D3Z714 54 aa5.59□□□□□ -1.51
Clcn3-203ENSMUST00000093490 Lce3dE9Q8V1 98 aa5.59□□□□□ -1.51
Clcn3-203ENSMUST00000093490 HydinQ80W93 5154 aa5.56□□□□□ -1.52
Clcn3-203ENSMUST00000093490 Lce3eF8VQJ0 98 aa5.54□□□□□ -1.52
Clcn3-203ENSMUST00000093490 Lce3fQ6PAI4 98 aa5.54□□□□□ -1.52
Clcn3-203ENSMUST00000093490 Gm38119A0A0A6YX29 146 aa5.53□□□□□ -1.52
Clcn3-203ENSMUST00000093490 Fat2Q5F226 4351 aa5.53□□□□□ -1.52
Clcn3-203ENSMUST00000093490 Lrp2A2ARV4 4660 aa5.49□□□□□ -1.53
Clcn3-203ENSMUST00000093490 Gm11569B1AQB1 180 aa5.47□□□□□ -1.53
Clcn3-203ENSMUST00000093490 Pkhd1l1Q80ZA4 4249 aa5.46□□□□□ -1.53
Clcn3-203ENSMUST00000093490 Birc6O88738 4882 aa5.43□□□□□ -1.54
Clcn3-203ENSMUST00000093490 Vps13bQ80TY5 3993 aa5.42□□□□□ -1.54
Clcn3-203ENSMUST00000093490 Lce1jD3YUU5 139 aa5.41□□□□□ -1.54
Clcn3-203ENSMUST00000093490 Lce3aQ497I5 98 aa5.41□□□□□ -1.54
Clcn3-203ENSMUST00000093490 Lce1fB9EJP6 147 aa5.31□□□□□ -1.56
Clcn3-203ENSMUST00000093490 Lce1cQ9D1C5 147 aa5.31□□□□□ -1.56
Clcn3-203ENSMUST00000093490 Lce1lQ9D1G7 135 aa5.31□□□□□ -1.56
Clcn3-203ENSMUST00000093490 Lce1dQ9D731 133 aa5.31□□□□□ -1.56
Clcn3-203ENSMUST00000093490 Krtap9-3Q3V2C1 136 aa5.29□□□□□ -1.56
Clcn3-203ENSMUST00000093490 PcloQ9QYX7 5068 aa5.29□□□□□ -1.56
Clcn3-203ENSMUST00000093490 Lce1bQ9D149 137 aa5.27□□□□□ -1.57
Clcn3-203ENSMUST00000093490 Krtap19-4Q925H7 84 aa5.25□□□□□ -1.57
Clcn3-203ENSMUST00000093490 Krtap4-2B1AQ85 167 aa5.24□□□□□ -1.57
Clcn3-203ENSMUST00000093490 Sprr2fO70557 76 aa5.23□□□□□ -1.57
Clcn3-203ENSMUST00000093490 Lce1gQ9D195 139 aa5.19□□□□□ -1.58
Clcn3-203ENSMUST00000093490 Lce1iQ9D6P5 149 aa5.19□□□□□ -1.58
Clcn3-203ENSMUST00000093490 Lce1hQ9D6R3 140 aa5.19□□□□□ -1.58
Clcn3-203ENSMUST00000093490 Gm10024A0A0A0MQA4 119 aa5.17□□□□□ -1.58
Clcn3-203ENSMUST00000093490 Pkhd1E9PZ36 4059 aa5.16□□□□□ -1.58
Clcn3-203ENSMUST00000093490 Lce1eQ9D139 143 aa5.15□□□□□ -1.59
Clcn3-203ENSMUST00000093490 Kmt2cQ8BRH4 4903 aa5.12□□□□□ -1.59
Clcn3-203ENSMUST00000093490 Sprr2eO70556 76 aa5.11□□□□□ -1.59
Clcn3-203ENSMUST00000093490 Mt4P47945 62 aa5.1□□□□□ -1.59
Clcn3-203ENSMUST00000093490 4932415D10RikA0A1W2P6U8 4986 aa5.09□□□□□ -1.6
Clcn3-203ENSMUST00000093490 Krtap4-6Q3V4B7 195 aa5.07□□□□□ -1.6
Clcn3-203ENSMUST00000093490 A0A1Y7VLE6 161 aa5.01□□□□□ -1.61
Clcn3-203ENSMUST00000093490 Abca13Q5SSE9 5034 aa4.94□□□□□ -1.62
Clcn3-203ENSMUST00000093490 Mdn1A2ANY6 5589 aaKnown RBP4.92□□□□□ -1.62
Clcn3-203ENSMUST00000093490 Gm11596B1AQB0 205 aa4.92□□□□□ -1.62
Clcn3-203ENSMUST00000093490 Lce1a2Q9D1K4 149 aa4.91□□□□□ -1.62
Clcn3-203ENSMUST00000093490 Krtap4-1Q3UUY3 169 aa4.9□□□□□ -1.62
Clcn3-203ENSMUST00000093490 ZanO88799 5376 aa4.89□□□□□ -1.63
Clcn3-203ENSMUST00000093490 Fat4Q2PZL6 4981 aa4.87□□□□□ -1.63
Clcn3-203ENSMUST00000093490 Muc5bE9Q5I3 4800 aa4.85□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 85.3 ms