RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Vps13dB1ART2 4390 aa4.45□□□□□ -1.7
Scn8a-201ENSMUST00000082209 Dnah17Q69Z23 4481 aa4.45□□□□□ -1.7
Scn8a-201ENSMUST00000082209 Krtap19-9bQ99NG9 58 aa4.43□□□□□ -1.7
Scn8a-201ENSMUST00000082209 Dnah11E9Q7N9 4488 aa4.37□□□□□ -1.71
Scn8a-201ENSMUST00000082209 Krtap1-4Q3V2D6 188 aa4.35□□□□□ -1.71
Scn8a-201ENSMUST00000082209 Crct1Q6PAI5 102 aa4.35□□□□□ -1.71
Scn8a-201ENSMUST00000082209 Dnah2P0C6F1 4456 aa4.32□□□□□ -1.72
Scn8a-201ENSMUST00000082209 Krtap8-1O08633 61 aa4.32□□□□□ -1.72
Scn8a-201ENSMUST00000082209 Gm10318A0A1W2P728 225 aa4.31□□□□□ -1.72
Scn8a-201ENSMUST00000082209 Hectd4E9Q2E4 4418 aa4.29□□□□□ -1.72
Scn8a-201ENSMUST00000082209 Dnah5Q8VHE6 4621 aa4.28□□□□□ -1.72
Scn8a-201ENSMUST00000082209 Dnah9B1AR51 4484 aa4.26□□□□□ -1.73
Scn8a-201ENSMUST00000082209 Pkd1O08852 4293 aa4.23□□□□□ -1.73
Scn8a-201ENSMUST00000082209 Gm6358A0A087WPH4 74 aa4.22□□□□□ -1.73
Scn8a-201ENSMUST00000082209 ApobE9Q414 4505 aa4.21□□□□□ -1.74
Scn8a-201ENSMUST00000082209 Krtap12-1Q9Z287 130 aa4.2□□□□□ -1.74
Scn8a-201ENSMUST00000082209 Stard9Q80TF6 4561 aa4.12□□□□□ -1.75
Scn8a-201ENSMUST00000082209 PlecQ9QXS1 4691 aaKnown RBP4.06□□□□□ -1.76
Scn8a-201ENSMUST00000082209 Gm19402J3QJV4 266 aa4.06□□□□□ -1.76
Scn8a-201ENSMUST00000082209 Pkhd1l1Q80ZA4 4249 aa4.04□□□□□ -1.76
Scn8a-201ENSMUST00000082209 2310046K23RikA0A0A6YVW6 87 aa4.03□□□□□ -1.76
Scn8a-201ENSMUST00000082209 Pkhd1E9PZ36 4059 aa4□□□□□ -1.77
Scn8a-201ENSMUST00000082209 Sprr2kO70562 68 aa4□□□□□ -1.77
Scn8a-201ENSMUST00000082209 SacsQ9JLC8 4582 aa3.99□□□□□ -1.77
Scn8a-201ENSMUST00000082209 Fat2Q5F226 4351 aa3.98□□□□□ -1.77
Scn8a-201ENSMUST00000082209 LorP18165 486 aa3.96□□□□□ -1.77
Scn8a-201ENSMUST00000082209 Lrp1bQ9JI18 4599 aa3.96□□□□□ -1.77
Scn8a-201ENSMUST00000082209 Gm18596A0A1W2P860 280 aa3.95□□□□□ -1.78
Scn8a-201ENSMUST00000082209 Sprr2gO70558 76 aa3.94□□□□□ -1.78
Scn8a-201ENSMUST00000082209 Dync1h1Q9JHU4 4644 aaKnown RBP3.89□□□□□ -1.79
Scn8a-201ENSMUST00000082209 Gm10100J3QK64 120 aa3.88□□□□□ -1.79
Scn8a-201ENSMUST00000082209 Lce3bQ9CQM7 98 aa3.86□□□□□ -1.79
Scn8a-201ENSMUST00000082209 Fat1A0A1L1SQU7 4645 aa3.81□□□□□ -1.8
Scn8a-201ENSMUST00000082209 Gm10142J3KMP7 120 aa3.8□□□□□ -1.8
Scn8a-201ENSMUST00000082209 Lce3cQ91V05 98 aa3.8□□□□□ -1.8
Scn8a-201ENSMUST00000082209 Krtap16-3Q8C1I6 86 aa3.78□□□□□ -1.8
Scn8a-201ENSMUST00000082209 Mycbp2Q7TPH6 4711 aa3.76□□□□□ -1.81
Scn8a-201ENSMUST00000082209 Krtap19-3Q925H6 87 aa3.76□□□□□ -1.81
Scn8a-201ENSMUST00000082209 Gm10272F7CZ33 110 aa3.75□□□□□ -1.81
Scn8a-201ENSMUST00000082209 Lrp1Q91ZX7 4545 aaKnown RBP3.75□□□□□ -1.81
Scn8a-201ENSMUST00000082209 Lce3eF8VQJ0 98 aa3.73□□□□□ -1.81
Scn8a-201ENSMUST00000082209 Lce3fQ6PAI4 98 aa3.73□□□□□ -1.81
Scn8a-201ENSMUST00000082209 Lce3dE9Q8V1 98 aa3.72□□□□□ -1.81
Scn8a-201ENSMUST00000082209 Lce1mQ9CR91 182 aa3.72□□□□□ -1.81
Scn8a-201ENSMUST00000082209 Dnah8Q91XQ0 4731 aa3.72□□□□□ -1.81
Scn8a-201ENSMUST00000082209 Prm1P02319 51 aa3.7□□□□□ -1.82
Scn8a-201ENSMUST00000082209 Krtap9-5A2A5X3 358 aa3.69□□□□□ -1.82
Scn8a-201ENSMUST00000082209 Krtap19-1Q925H2 87 aa3.65□□□□□ -1.83
Scn8a-201ENSMUST00000082209 Fat3Q8BNA6 4555 aa3.64□□□□□ -1.83
Scn8a-201ENSMUST00000082209 Krtap22-2J3QNX6 67 aa3.64□□□□□ -1.83
Scn8a-201ENSMUST00000082209 Mt2P02798 61 aa3.62□□□□□ -1.83
Scn8a-201ENSMUST00000082209 Lce3aQ497I5 98 aa3.61□□□□□ -1.83
Scn8a-201ENSMUST00000082209 Sprr2iO70560 76 aa3.6□□□□□ -1.83
Scn8a-201ENSMUST00000082209 Krtap19-4Q925H7 84 aa3.59□□□□□ -1.83
Scn8a-201ENSMUST00000082209 Krtap19-2Q925I0 141 aa3.5□□□□□ -1.85
Scn8a-201ENSMUST00000082209 Krtap9-3Q3V2C1 136 aa3.49□□□□□ -1.85
Scn8a-201ENSMUST00000082209 Gm10024A0A0A0MQA4 119 aa3.48□□□□□ -1.85
Scn8a-201ENSMUST00000082209 Gm9789Q8BIG3 52 aa3.43□□□□□ -1.86
Scn8a-201ENSMUST00000082209 Gm7735D3YX18 52 aa3.43□□□□□ -1.86
Scn8a-201ENSMUST00000082209 Krtap1-3A2A588 173 aa3.38□□□□□ -1.87
Scn8a-201ENSMUST00000082209 Ryr1E9PZQ0 5035 aa3.37□□□□□ -1.87
Scn8a-201ENSMUST00000082209 Lce1bQ9D149 137 aa3.36□□□□□ -1.87
Scn8a-201ENSMUST00000082209 Ryr2E9Q401 4966 aaKnown RBP3.35□□□□□ -1.87
Scn8a-201ENSMUST00000082209 Sprr2hO70559 108 aa3.34□□□□□ -1.87
Scn8a-201ENSMUST00000082209 Lce1fB9EJP6 147 aa3.34□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Lce1cQ9D1C5 147 aa3.34□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Lce1lQ9D1G7 135 aa3.34□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Lce1dQ9D731 133 aa3.34□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Lce1jD3YUU5 139 aa3.32□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Lce1eQ9D139 143 aa3.32□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Sprr2fO70557 76 aa3.32□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Lce1gQ9D195 139 aa3.3□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Lce1iQ9D6P5 149 aa3.3□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Lce1hQ9D6R3 140 aa3.3□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Sprr2dO70555 85 aa3.3□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Gm38119A0A0A6YX29 146 aa3.29□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Sprr2eO70556 76 aa3.28□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Lrp2A2ARV4 4660 aa3.28□□□□□ -1.88
Scn8a-201ENSMUST00000082209 Gm10061D3Z714 54 aa3.27□□□□□ -1.89
Scn8a-201ENSMUST00000082209 Dnhd1D3Z2X2 4750 aa3.23□□□□□ -1.89
Scn8a-201ENSMUST00000082209 Kmt2cQ8BRH4 4903 aa3.21□□□□□ -1.89
Scn8a-201ENSMUST00000082209 Gm11569B1AQB1 180 aa3.16□□□□□ -1.9
Scn8a-201ENSMUST00000082209 Ryr3A2AGL3 4863 aa3.14□□□□□ -1.91
Scn8a-201ENSMUST00000082209 Gm11562A0PK51 136 aa3.12□□□□□ -1.91
Scn8a-201ENSMUST00000082209 Gm11938Q9D3H4 131 aa3.12□□□□□ -1.91
Scn8a-201ENSMUST00000082209 Krtap31-2Q8CAY5 177 aa3.08□□□□□ -1.92
Scn8a-201ENSMUST00000082209 Krtap31-1Q9D644 177 aa3.06□□□□□ -1.92
Scn8a-201ENSMUST00000082209 Herc2Q4U2R1 4836 aa3.06□□□□□ -1.92
Scn8a-201ENSMUST00000082209 ZanO88799 5376 aa3.03□□□□□ -1.92
Scn8a-201ENSMUST00000082209 Lce1a2Q9D1K4 149 aa3□□□□□ -1.93
Scn8a-201ENSMUST00000082209 Mt4P47945 62 aa2.98□□□□□ -1.93
Scn8a-201ENSMUST00000082209 PcloQ9QYX7 5068 aa2.96□□□□□ -1.94
Scn8a-201ENSMUST00000082209 Birc6O88738 4882 aa2.94□□□□□ -1.94
Scn8a-201ENSMUST00000082209 Mt3P28184 68 aa2.92□□□□□ -1.94
Scn8a-201ENSMUST00000082209 Hmcn2A2AJ76 5100 aa2.91□□□□□ -1.94
Scn8a-201ENSMUST00000082209 Krtap4-2B1AQ85 167 aa2.89□□□□□ -1.95
Scn8a-201ENSMUST00000082209 Krtap4-6Q3V4B7 195 aa2.87□□□□□ -1.95
Scn8a-201ENSMUST00000082209 Mt1P02802 61 aaKnown RBP2.86□□□□□ -1.95
Scn8a-201ENSMUST00000082209 Herc1E9PZP8 4859 aa2.84□□□□□ -1.95
Scn8a-201ENSMUST00000082209 Sprr2bO70554 98 aa2.83□□□□□ -1.96
Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms