RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Hspg2Q05793 3707 aaKnown RBP3.04□□□□□ -1.92
Scn3a-201ENSMUST00000066432 Krtap8-1O08633 61 aa3.03□□□□□ -1.92
Scn3a-201ENSMUST00000066432 Krtap7-1Q9D3I6 87 aa3.01□□□□□ -1.93
Scn3a-201ENSMUST00000066432 Dnah10D3YYQ8 4591 aa3□□□□□ -1.93
Scn3a-201ENSMUST00000066432 A030003K21RikA0A1Y7VIM3 128 aa3□□□□□ -1.93
Scn3a-201ENSMUST00000066432 Krtap12-1Q9Z287 130 aa2.98□□□□□ -1.93
Scn3a-201ENSMUST00000066432 Csmd3Q80T79 3707 aa2.95□□□□□ -1.94
Scn3a-201ENSMUST00000066432 Gm19402J3QJV4 266 aa2.93□□□□□ -1.94
Scn3a-201ENSMUST00000066432 Crct1Q6PAI5 102 aa2.93□□□□□ -1.94
Scn3a-201ENSMUST00000066432 Pkd1O08852 4293 aa2.92□□□□□ -1.94
Scn3a-201ENSMUST00000066432 Dnah17Q69Z23 4481 aa2.9□□□□□ -1.95
Scn3a-201ENSMUST00000066432 Hectd4E9Q2E4 4418 aa2.9□□□□□ -1.95
Scn3a-201ENSMUST00000066432 Prm1P02319 51 aa2.89□□□□□ -1.95
Scn3a-201ENSMUST00000066432 Ryr1E9PZQ0 5035 aa2.89□□□□□ -1.95
Scn3a-201ENSMUST00000066432 Dnah5Q8VHE6 4621 aa2.88□□□□□ -1.95
Scn3a-201ENSMUST00000066432 2310046K23RikA0A0A6YVW6 87 aa2.87□□□□□ -1.95
Scn3a-201ENSMUST00000066432 Gm18596A0A1W2P860 280 aa2.85□□□□□ -1.95
Scn3a-201ENSMUST00000066432 Lce1mQ9CR91 182 aa2.84□□□□□ -1.95
Scn3a-201ENSMUST00000066432 Dync1h1Q9JHU4 4644 aaKnown RBP2.83□□□□□ -1.96
Scn3a-201ENSMUST00000066432 PlecQ9QXS1 4691 aaKnown RBP2.83□□□□□ -1.96
Scn3a-201ENSMUST00000066432 Dnah9B1AR51 4484 aa2.82□□□□□ -1.96
Scn3a-201ENSMUST00000066432 Gm10318A0A1W2P728 225 aa2.79□□□□□ -1.96
Scn3a-201ENSMUST00000066432 Sprr2kO70562 68 aa2.79□□□□□ -1.96
Scn3a-201ENSMUST00000066432 Gm6358A0A087WPH4 74 aa2.79□□□□□ -1.96
Scn3a-201ENSMUST00000066432 Dnah2P0C6F1 4456 aa2.78□□□□□ -1.96
Scn3a-201ENSMUST00000066432 Gm6217A0A1Y7VJK9 128 aa2.78□□□□□ -1.96
Scn3a-201ENSMUST00000066432 LorP18165 486 aa2.78□□□□□ -1.96
Scn3a-201ENSMUST00000066432 Sprr2gO70558 76 aa2.77□□□□□ -1.97
Scn3a-201ENSMUST00000066432 Pkhd1E9PZ36 4059 aa2.74□□□□□ -1.97
Scn3a-201ENSMUST00000066432 Krtap16-3Q8C1I6 86 aa2.74□□□□□ -1.97
Scn3a-201ENSMUST00000066432 Krtap19-3Q925H6 87 aa2.73□□□□□ -1.97
Scn3a-201ENSMUST00000066432 Lrp1Q91ZX7 4545 aaKnown RBP2.73□□□□□ -1.97
Scn3a-201ENSMUST00000066432 Stard9Q80TF6 4561 aa2.73□□□□□ -1.97
Scn3a-201ENSMUST00000066432 Pkhd1l1Q80ZA4 4249 aa2.72□□□□□ -1.97
Scn3a-201ENSMUST00000066432 Dnah11E9Q7N9 4488 aa2.71□□□□□ -1.98
Scn3a-201ENSMUST00000066432 Krtap19-1Q925H2 87 aa2.7□□□□□ -1.98
Scn3a-201ENSMUST00000066432 Dnah8Q91XQ0 4731 aa2.69□□□□□ -1.98
Scn3a-201ENSMUST00000066432 Lce3bQ9CQM7 98 aa2.68□□□□□ -1.98
Scn3a-201ENSMUST00000066432 ApobE9Q414 4505 aa2.67□□□□□ -1.98
Scn3a-201ENSMUST00000066432 Gm7735D3YX18 52 aa2.66□□□□□ -1.98
Scn3a-201ENSMUST00000066432 Gm9789Q8BIG3 52 aa2.65□□□□□ -1.98
Scn3a-201ENSMUST00000066432 SacsQ9JLC8 4582 aa2.63□□□□□ -1.99
Scn3a-201ENSMUST00000066432 Krtap22-2J3QNX6 67 aa2.63□□□□□ -1.99
Scn3a-201ENSMUST00000066432 Krtap9-5A2A5X3 358 aa2.6□□□□□ -1.99
Scn3a-201ENSMUST00000066432 Lrp1bQ9JI18 4599 aa2.6□□□□□ -1.99
Scn3a-201ENSMUST00000066432 Gm10100J3QK64 120 aa2.6□□□□□ -1.99
Scn3a-201ENSMUST00000066432 Mt2P02798 61 aa2.59□□□□□ -1.99
Scn3a-201ENSMUST00000066432 Lce3cQ91V05 98 aa2.59□□□□□ -2
Scn3a-201ENSMUST00000066432 Lce3dE9Q8V1 98 aa2.58□□□□□ -2
Scn3a-201ENSMUST00000066432 Fat1A0A1L1SQU7 4645 aa2.57□□□□□ -2
Scn3a-201ENSMUST00000066432 A030005K14RikA0A1Y7VNY1 122 aa2.56□□□□□ -2
Scn3a-201ENSMUST00000066432 Mycbp2Q7TPH6 4711 aa2.56□□□□□ -2
Scn3a-201ENSMUST00000066432 Krtap28-10A0A1Y7VP58 119 aa2.55□□□□□ -2
Scn3a-201ENSMUST00000066432 Gm10142J3KMP7 120 aa2.55□□□□□ -2
Scn3a-201ENSMUST00000066432 Krtap19-2Q925I0 141 aa2.55□□□□□ -2
Scn3a-201ENSMUST00000066432 Ryr2E9Q401 4966 aaKnown RBP2.53□□□□□ -2
Scn3a-201ENSMUST00000066432 Krtap19-4Q925H7 84 aa2.53□□□□□ -2
Scn3a-201ENSMUST00000066432 Krtap31-1Q9D644 177 aa2.53□□□□□ -2
Scn3a-201ENSMUST00000066432 Lce3eF8VQJ0 98 aa2.52□□□□□ -2.01
Scn3a-201ENSMUST00000066432 Lce3fQ6PAI4 98 aa2.52□□□□□ -2.01
Scn3a-201ENSMUST00000066432 Krtap31-2Q8CAY5 177 aa2.52□□□□□ -2.01
Scn3a-201ENSMUST00000066432 Fat2Q5F226 4351 aa2.51□□□□□ -2.01
Scn3a-201ENSMUST00000066432 Gm10272F7CZ33 110 aa2.5□□□□□ -2.01
Scn3a-201ENSMUST00000066432 Dnhd1D3Z2X2 4750 aa2.5□□□□□ -2.01
Scn3a-201ENSMUST00000066432 Sprr2iO70560 76 aa2.5□□□□□ -2.01
Scn3a-201ENSMUST00000066432 Lce3aQ497I5 98 aa2.48□□□□□ -2.01
Scn3a-201ENSMUST00000066432 Krtap1-3A2A588 173 aa2.46□□□□□ -2.02
Scn3a-201ENSMUST00000066432 Krtap9-3Q3V2C1 136 aa2.45□□□□□ -2.02
Scn3a-201ENSMUST00000066432 Gm10061D3Z714 54 aa2.44□□□□□ -2.02
Scn3a-201ENSMUST00000066432 A0A1Y7VJH8 109 aa2.41□□□□□ -2.02
Scn3a-201ENSMUST00000066432 Gm7544A0A1Y7VJ58 118 aa2.4□□□□□ -2.03
Scn3a-201ENSMUST00000066432 Fat3Q8BNA6 4555 aa2.39□□□□□ -2.03
Scn3a-201ENSMUST00000066432 A030005L19RikA0A1Y7VIU2 113 aa2.39□□□□□ -2.03
Scn3a-201ENSMUST00000066432 ZanO88799 5376 aa2.38□□□□□ -2.03
Scn3a-201ENSMUST00000066432 Mt3P28184 68 aa2.37□□□□□ -2.03
Scn3a-201ENSMUST00000066432 Birc6O88738 4882 aa2.36□□□□□ -2.03
Scn3a-201ENSMUST00000066432 Sprr2dO70555 85 aa2.35□□□□□ -2.03
Scn3a-201ENSMUST00000066432 Gm10024A0A0A0MQA4 119 aa2.34□□□□□ -2.03
Scn3a-201ENSMUST00000066432 Lrp2A2ARV4 4660 aa2.34□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Lce1jD3YUU5 139 aa2.34□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Sprr2hO70559 108 aa2.34□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Gm11569B1AQB1 180 aa2.32□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Lce1fB9EJP6 147 aa2.32□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Lce1cQ9D1C5 147 aa2.32□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Lce1lQ9D1G7 135 aa2.32□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Lce1dQ9D731 133 aa2.32□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Ryr3A2AGL3 4863 aa2.32□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Lce1bQ9D149 137 aa2.32□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Herc2Q4U2R1 4836 aa2.31□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Sprr2fO70557 76 aa2.31□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Krtap28-13A0A087WQP5 138 aa2.3□□□□□ -2.04
Scn3a-201ENSMUST00000066432 PcloQ9QYX7 5068 aa2.3□□□□□ -2.04
Scn3a-201ENSMUST00000066432 A0A1Y7VJ07 166 aa2.28□□□□□ -2.04
Scn3a-201ENSMUST00000066432 Lce1eQ9D139 143 aa2.27□□□□□ -2.05
Scn3a-201ENSMUST00000066432 Gm11562A0PK51 136 aa2.27□□□□□ -2.05
Scn3a-201ENSMUST00000066432 Gm11938Q9D3H4 131 aa2.27□□□□□ -2.05
Scn3a-201ENSMUST00000066432 Kmt2cQ8BRH4 4903 aa2.25□□□□□ -2.05
Scn3a-201ENSMUST00000066432 Sprr2eO70556 76 aa2.24□□□□□ -2.05
Scn3a-201ENSMUST00000066432 Gm38119A0A0A6YX29 146 aa2.24□□□□□ -2.05
Scn3a-201ENSMUST00000066432 Kiaa1109A2AAE1 5005 aa2.22□□□□□ -2.05
Retrieved 100 of 22,080 RNA–protein pairs in 85.8 ms