RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Krtap19-9aF8WH65 55 aa4.47□□□□□ -1.69
Nipbl-201ENSMUST00000052965 Dnah17Q69Z23 4481 aa4.45□□□□□ -1.7
Nipbl-201ENSMUST00000052965 Dync2h1Q45VK7 4306 aa4.45□□□□□ -1.7
Nipbl-201ENSMUST00000052965 Fras1Q80T14 4010 aa4.43□□□□□ -1.7
Nipbl-201ENSMUST00000052965 Krtap19-9bQ99NG9 58 aa4.42□□□□□ -1.7
Nipbl-201ENSMUST00000052965 Dnah11E9Q7N9 4488 aa4.39□□□□□ -1.71
Nipbl-201ENSMUST00000052965 Krtap1-4Q3V2D6 188 aa4.36□□□□□ -1.71
Nipbl-201ENSMUST00000052965 Gm19402J3QJV4 266 aa4.32□□□□□ -1.72
Nipbl-201ENSMUST00000052965 Dnah5Q8VHE6 4621 aa4.32□□□□□ -1.72
Nipbl-201ENSMUST00000052965 Hectd4E9Q2E4 4418 aa4.31□□□□□ -1.72
Nipbl-201ENSMUST00000052965 Dnah2P0C6F1 4456 aa4.31□□□□□ -1.72
Nipbl-201ENSMUST00000052965 Krtap12-1Q9Z287 130 aa4.3□□□□□ -1.72
Nipbl-201ENSMUST00000052965 Gm6358A0A087WPH4 74 aa4.26□□□□□ -1.73
Nipbl-201ENSMUST00000052965 Krtap8-1O08633 61 aa4.23□□□□□ -1.73
Nipbl-201ENSMUST00000052965 2310046K23RikA0A0A6YVW6 87 aa4.21□□□□□ -1.74
Nipbl-201ENSMUST00000052965 Dnah9B1AR51 4484 aa4.2□□□□□ -1.74
Nipbl-201ENSMUST00000052965 ApobE9Q414 4505 aa4.19□□□□□ -1.74
Nipbl-201ENSMUST00000052965 Pkd1O08852 4293 aa4.14□□□□□ -1.75
Nipbl-201ENSMUST00000052965 LorP18165 486 aa4.1□□□□□ -1.75
Nipbl-201ENSMUST00000052965 PlecQ9QXS1 4691 aaKnown RBP4.09□□□□□ -1.75
Nipbl-201ENSMUST00000052965 Stard9Q80TF6 4561 aa4.09□□□□□ -1.76
Nipbl-201ENSMUST00000052965 Gm18596A0A1W2P860 280 aa4.06□□□□□ -1.76
Nipbl-201ENSMUST00000052965 Gm10100J3QK64 120 aa4.03□□□□□ -1.77
Nipbl-201ENSMUST00000052965 Lrp1bQ9JI18 4599 aa4.01□□□□□ -1.77
Nipbl-201ENSMUST00000052965 Pkhd1E9PZ36 4059 aa4□□□□□ -1.77
Nipbl-201ENSMUST00000052965 Fat2Q5F226 4351 aa3.97□□□□□ -1.77
Nipbl-201ENSMUST00000052965 Gm10272F7CZ33 110 aa3.95□□□□□ -1.78
Nipbl-201ENSMUST00000052965 Gm10142J3KMP7 120 aa3.94□□□□□ -1.78
Nipbl-201ENSMUST00000052965 Sprr2kO70562 68 aa3.94□□□□□ -1.78
Nipbl-201ENSMUST00000052965 SacsQ9JLC8 4582 aa3.92□□□□□ -1.78
Nipbl-201ENSMUST00000052965 Pkhd1l1Q80ZA4 4249 aa3.92□□□□□ -1.78
Nipbl-201ENSMUST00000052965 Krtap16-3Q8C1I6 86 aa3.91□□□□□ -1.78
Nipbl-201ENSMUST00000052965 Mycbp2Q7TPH6 4711 aa3.9□□□□□ -1.79
Nipbl-201ENSMUST00000052965 Lrp1Q91ZX7 4545 aaKnown RBP3.89□□□□□ -1.79
Nipbl-201ENSMUST00000052965 Krtap19-3Q925H6 87 aa3.87□□□□□ -1.79
Nipbl-201ENSMUST00000052965 Dync1h1Q9JHU4 4644 aaKnown RBP3.85□□□□□ -1.79
Nipbl-201ENSMUST00000052965 Lce3bQ9CQM7 98 aa3.85□□□□□ -1.79
Nipbl-201ENSMUST00000052965 Fat1A0A1L1SQU7 4645 aa3.83□□□□□ -1.8
Nipbl-201ENSMUST00000052965 Lce1mQ9CR91 182 aa3.8□□□□□ -1.8
Nipbl-201ENSMUST00000052965 Sprr2gO70558 76 aa3.79□□□□□ -1.8
Nipbl-201ENSMUST00000052965 Fat3Q8BNA6 4555 aa3.79□□□□□ -1.8
Nipbl-201ENSMUST00000052965 Dnah8Q91XQ0 4731 aa3.79□□□□□ -1.8
Nipbl-201ENSMUST00000052965 Krtap9-5A2A5X3 358 aa3.79□□□□□ -1.8
Nipbl-201ENSMUST00000052965 Lce3cQ91V05 98 aa3.79□□□□□ -1.8
Nipbl-201ENSMUST00000052965 Krtap19-1Q925H2 87 aa3.78□□□□□ -1.8
Nipbl-201ENSMUST00000052965 Lce3eF8VQJ0 98 aa3.72□□□□□ -1.81
Nipbl-201ENSMUST00000052965 Lce3fQ6PAI4 98 aa3.72□□□□□ -1.81
Nipbl-201ENSMUST00000052965 Mt2P02798 61 aa3.67□□□□□ -1.82
Nipbl-201ENSMUST00000052965 Prm1P02319 51 aa3.67□□□□□ -1.82
Nipbl-201ENSMUST00000052965 Lce3dE9Q8V1 98 aa3.67□□□□□ -1.82
Nipbl-201ENSMUST00000052965 Ryr1E9PZQ0 5035 aa3.65□□□□□ -1.83
Nipbl-201ENSMUST00000052965 Krtap9-3Q3V2C1 136 aa3.65□□□□□ -1.83
Nipbl-201ENSMUST00000052965 Krtap22-2J3QNX6 67 aa3.63□□□□□ -1.83
Nipbl-201ENSMUST00000052965 Lce3aQ497I5 98 aa3.62□□□□□ -1.83
Nipbl-201ENSMUST00000052965 Krtap19-4Q925H7 84 aa3.59□□□□□ -1.84
Nipbl-201ENSMUST00000052965 Krtap19-2Q925I0 141 aa3.58□□□□□ -1.84
Nipbl-201ENSMUST00000052965 Lce1jD3YUU5 139 aa3.52□□□□□ -1.85
Nipbl-201ENSMUST00000052965 Krtap1-3A2A588 173 aa3.52□□□□□ -1.85
Nipbl-201ENSMUST00000052965 Sprr2iO70560 76 aa3.52□□□□□ -1.85
Nipbl-201ENSMUST00000052965 Gm10024A0A0A0MQA4 119 aa3.5□□□□□ -1.85
Nipbl-201ENSMUST00000052965 Gm7735D3YX18 52 aa3.48□□□□□ -1.85
Nipbl-201ENSMUST00000052965 Gm9789Q8BIG3 52 aa3.48□□□□□ -1.85
Nipbl-201ENSMUST00000052965 Lrp2A2ARV4 4660 aa3.45□□□□□ -1.86
Nipbl-201ENSMUST00000052965 Sprr2fO70557 76 aa3.45□□□□□ -1.86
Nipbl-201ENSMUST00000052965 Sprr2hO70559 108 aa3.43□□□□□ -1.86
Nipbl-201ENSMUST00000052965 Sprr2dO70555 85 aa3.42□□□□□ -1.86
Nipbl-201ENSMUST00000052965 Ryr2E9Q401 4966 aaKnown RBP3.4□□□□□ -1.86
Nipbl-201ENSMUST00000052965 Kmt2cQ8BRH4 4903 aa3.39□□□□□ -1.87
Nipbl-201ENSMUST00000052965 Gm38119A0A0A6YX29 146 aa3.38□□□□□ -1.87
Nipbl-201ENSMUST00000052965 Krtap31-1Q9D644 177 aa3.35□□□□□ -1.87
Nipbl-201ENSMUST00000052965 Lce1gQ9D195 139 aa3.35□□□□□ -1.87
Nipbl-201ENSMUST00000052965 Gm11938Q9D3H4 131 aa3.35□□□□□ -1.87
Nipbl-201ENSMUST00000052965 Lce1iQ9D6P5 149 aa3.35□□□□□ -1.87
Nipbl-201ENSMUST00000052965 Lce1hQ9D6R3 140 aa3.35□□□□□ -1.87
Nipbl-201ENSMUST00000052965 Ryr3A2AGL3 4863 aa3.35□□□□□ -1.87
Nipbl-201ENSMUST00000052965 Lce1bQ9D149 137 aa3.35□□□□□ -1.87
Nipbl-201ENSMUST00000052965 Lce1fB9EJP6 147 aa3.33□□□□□ -1.88
Nipbl-201ENSMUST00000052965 Lce1cQ9D1C5 147 aa3.33□□□□□ -1.88
Nipbl-201ENSMUST00000052965 Lce1lQ9D1G7 135 aa3.33□□□□□ -1.88
Nipbl-201ENSMUST00000052965 Lce1dQ9D731 133 aa3.33□□□□□ -1.88
Nipbl-201ENSMUST00000052965 Gm10061D3Z714 54 aa3.32□□□□□ -1.88
Nipbl-201ENSMUST00000052965 Lce1eQ9D139 143 aa3.31□□□□□ -1.88
Nipbl-201ENSMUST00000052965 Dnhd1D3Z2X2 4750 aa3.26□□□□□ -1.89
Nipbl-201ENSMUST00000052965 Sprr2eO70556 76 aa3.25□□□□□ -1.89
Nipbl-201ENSMUST00000052965 Gm11569B1AQB1 180 aa3.23□□□□□ -1.89
Nipbl-201ENSMUST00000052965 Herc2Q4U2R1 4836 aa3.21□□□□□ -1.9
Nipbl-201ENSMUST00000052965 Lce1a2Q9D1K4 149 aa3.19□□□□□ -1.9
Nipbl-201ENSMUST00000052965 PcloQ9QYX7 5068 aa3.16□□□□□ -1.9
Nipbl-201ENSMUST00000052965 ZanO88799 5376 aa3.16□□□□□ -1.9
Nipbl-201ENSMUST00000052965 Gm11562A0PK51 136 aa3.14□□□□□ -1.91
Nipbl-201ENSMUST00000052965 Kiaa1109A2AAE1 5005 aa3.07□□□□□ -1.92
Nipbl-201ENSMUST00000052965 Mt4P47945 62 aa3.06□□□□□ -1.92
Nipbl-201ENSMUST00000052965 Krtap4-16Q91W93 202 aa2.99□□□□□ -1.93
Nipbl-201ENSMUST00000052965 Krtap4-6Q3V4B7 195 aa2.99□□□□□ -1.93
Nipbl-201ENSMUST00000052965 Birc6O88738 4882 aa2.97□□□□□ -1.93
Nipbl-201ENSMUST00000052965 Abca13Q5SSE9 5034 aa2.96□□□□□ -1.94
Nipbl-201ENSMUST00000052965 Herc1E9PZP8 4859 aa2.95□□□□□ -1.94
Nipbl-201ENSMUST00000052965 Hmcn2A2AJ76 5100 aa2.95□□□□□ -1.94
Nipbl-201ENSMUST00000052965 Krtap4-2B1AQ85 167 aa2.94□□□□□ -1.94
Nipbl-201ENSMUST00000052965 Syne1Q6ZWR6 8799 aa2.9□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 111.9 ms