RNA–Protein interactions for RNA: ENSMUST00000035340.13

Usp54-202, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,495 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-202ENSMUST00000035340 PlecQ9QXS1 4691 aaKnown RBP3.17□□□□□ -1.9
Usp54-202ENSMUST00000035340 Xirp2Q4U4S6 3784 aa3.15□□□□□ -1.91
Usp54-202ENSMUST00000035340 Prm1P02319 51 aa3.13□□□□□ -1.91
Usp54-202ENSMUST00000035340 Muc6Q80T03 2850 aa3.13□□□□□ -1.91
Usp54-202ENSMUST00000035340 Dnah6E9Q0B6 4144 aa3.13□□□□□ -1.91
Usp54-202ENSMUST00000035340 PrkdcP97313 4128 aa3.08□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dync1h1Q9JHU4 4644 aaKnown RBP3.07□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dnah2P0C6F1 4456 aa3.06□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dnah17Q69Z23 4481 aa3.06□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dnah10D3YYQ8 4591 aa3.06□□□□□ -1.92
Usp54-202ENSMUST00000035340 Ryr1E9PZQ0 5035 aa3.06□□□□□ -1.92
Usp54-202ENSMUST00000035340 Hspg2Q05793 3707 aaKnown RBP3.06□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dnah8Q91XQ0 4731 aa3.05□□□□□ -1.92
Usp54-202ENSMUST00000035340 Herc1E9PZP8 4859 aa3.05□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dync2h1Q45VK7 4306 aa3.01□□□□□ -1.93
Usp54-202ENSMUST00000035340 Pkd1O08852 4293 aa3□□□□□ -1.93
Usp54-202ENSMUST00000035340 Lce3bQ9CQM7 98 aa2.99□□□□□ -1.93
Usp54-202ENSMUST00000035340 Dnhd1D3Z2X2 4750 aa2.99□□□□□ -1.93
Usp54-202ENSMUST00000035340 Dnah1E9Q8T7 4250 aa2.97□□□□□ -1.93
Usp54-202ENSMUST00000035340 Krtap9-5A2A5X3 358 aa2.96□□□□□ -1.94
Usp54-202ENSMUST00000035340 Dnah3Q8BW94 4083 aa2.95□□□□□ -1.94
Usp54-202ENSMUST00000035340 Krtap19-3Q925H6 87 aa2.95□□□□□ -1.94
Usp54-202ENSMUST00000035340 Kmt2aP55200 3966 aa2.95□□□□□ -1.94
Usp54-202ENSMUST00000035340 Fat1A0A1L1SQU7 4645 aa2.95□□□□□ -1.94
Usp54-202ENSMUST00000035340 Lrp1bQ9JI18 4599 aa2.94□□□□□ -1.94
Usp54-202ENSMUST00000035340 Hectd4E9Q2E4 4418 aa2.93□□□□□ -1.94
Usp54-202ENSMUST00000035340 Gm7735D3YX18 52 aa2.92□□□□□ -1.94
Usp54-202ENSMUST00000035340 Krtap16-3Q8C1I6 86 aa2.92□□□□□ -1.94
Usp54-202ENSMUST00000035340 SacsQ9JLC8 4582 aa2.92□□□□□ -1.94
Usp54-202ENSMUST00000035340 Dnah11E9Q7N9 4488 aa2.91□□□□□ -1.94
Usp54-202ENSMUST00000035340 2310046K23RikA0A0A6YVW6 87 aa2.91□□□□□ -1.94
Usp54-202ENSMUST00000035340 Krtap22-2J3QNX6 67 aa2.89□□□□□ -1.95
Usp54-202ENSMUST00000035340 Lce3cQ91V05 98 aa2.89□□□□□ -1.95
Usp54-202ENSMUST00000035340 Krtap19-1Q925H2 87 aa2.88□□□□□ -1.95
Usp54-202ENSMUST00000035340 Dnah7bL7N1Y0 4068 aa2.87□□□□□ -1.95
Usp54-202ENSMUST00000035340 ApobE9Q414 4505 aa2.87□□□□□ -1.95
Usp54-202ENSMUST00000035340 Ryr2E9Q401 4966 aaKnown RBP2.87□□□□□ -1.95
Usp54-202ENSMUST00000035340 Dnah9B1AR51 4484 aa2.87□□□□□ -1.95
Usp54-202ENSMUST00000035340 Sprr2iO70560 76 aa2.86□□□□□ -1.95
Usp54-202ENSMUST00000035340 Fras1Q80T14 4010 aa2.86□□□□□ -1.95
Usp54-202ENSMUST00000035340 Gm9789Q8BIG3 52 aa2.85□□□□□ -1.95
Usp54-202ENSMUST00000035340 Dnah7aE9Q0T8 4024 aa2.84□□□□□ -1.95
Usp54-202ENSMUST00000035340 Lce3dE9Q8V1 98 aa2.83□□□□□ -1.96
Usp54-202ENSMUST00000035340 Mt2P02798 61 aa2.82□□□□□ -1.96
Usp54-202ENSMUST00000035340 Ryr3A2AGL3 4863 aa2.8□□□□□ -1.96
Usp54-202ENSMUST00000035340 Csmd3Q80T79 3707 aa2.8□□□□□ -1.96
Usp54-202ENSMUST00000035340 Gm10272F7CZ33 110 aa2.8□□□□□ -1.96
Usp54-202ENSMUST00000035340 Lrp1Q91ZX7 4545 aaKnown RBP2.79□□□□□ -1.96
Usp54-202ENSMUST00000035340 Lce3eF8VQJ0 98 aa2.79□□□□□ -1.96
Usp54-202ENSMUST00000035340 Lce3fQ6PAI4 98 aa2.79□□□□□ -1.96
Usp54-202ENSMUST00000035340 Mycbp2Q7TPH6 4711 aa2.79□□□□□ -1.96
Usp54-202ENSMUST00000035340 Gm10100J3QK64 120 aa2.78□□□□□ -1.96
Usp54-202ENSMUST00000035340 Dnah7cA0A087WR13 4024 aa2.77□□□□□ -1.97
Usp54-202ENSMUST00000035340 Krtap19-2Q925I0 141 aa2.77□□□□□ -1.97
Usp54-202ENSMUST00000035340 Fat3Q8BNA6 4555 aa2.76□□□□□ -1.97
Usp54-202ENSMUST00000035340 Gm38119A0A0A6YX29 146 aa2.74□□□□□ -1.97
Usp54-202ENSMUST00000035340 Lce3aQ497I5 98 aa2.73□□□□□ -1.97
Usp54-202ENSMUST00000035340 Krtap1-3A2A588 173 aa2.73□□□□□ -1.97
Usp54-202ENSMUST00000035340 Gm10142J3KMP7 120 aa2.73□□□□□ -1.97
Usp54-202ENSMUST00000035340 Gm10061D3Z714 54 aa2.73□□□□□ -1.97
Usp54-202ENSMUST00000035340 Sprr2fO70557 76 aa2.72□□□□□ -1.97
Usp54-202ENSMUST00000035340 Herc2Q4U2R1 4836 aa2.7□□□□□ -1.98
Usp54-202ENSMUST00000035340 Vps13bQ80TY5 3993 aa2.7□□□□□ -1.98
Usp54-202ENSMUST00000035340 Lrp2A2ARV4 4660 aa2.68□□□□□ -1.98
Usp54-202ENSMUST00000035340 Gm11569B1AQB1 180 aa2.67□□□□□ -1.98
Usp54-202ENSMUST00000035340 Lce1fB9EJP6 147 aa2.67□□□□□ -1.98
Usp54-202ENSMUST00000035340 Lce1cQ9D1C5 147 aa2.67□□□□□ -1.98
Usp54-202ENSMUST00000035340 Lce1lQ9D1G7 135 aa2.67□□□□□ -1.98
Usp54-202ENSMUST00000035340 Lce1dQ9D731 133 aa2.67□□□□□ -1.98
Usp54-202ENSMUST00000035340 Pkhd1E9PZ36 4059 aa2.65□□□□□ -1.99
Usp54-202ENSMUST00000035340 Pkhd1l1Q80ZA4 4249 aa2.64□□□□□ -1.99
Usp54-202ENSMUST00000035340 Krtap9-3Q3V2C1 136 aa2.64□□□□□ -1.99
Usp54-202ENSMUST00000035340 Lce1bQ9D149 137 aa2.63□□□□□ -1.99
Usp54-202ENSMUST00000035340 Fat2Q5F226 4351 aa2.63□□□□□ -1.99
Usp54-202ENSMUST00000035340 Krtap19-4Q925H7 84 aa2.61□□□□□ -1.99
Usp54-202ENSMUST00000035340 Sprr2eO70556 76 aa2.61□□□□□ -1.99
Usp54-202ENSMUST00000035340 Gm10024A0A0A0MQA4 119 aa2.6□□□□□ -1.99
Usp54-202ENSMUST00000035340 Lce1jD3YUU5 139 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Lce1gQ9D195 139 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Lce1iQ9D6P5 149 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Lce1hQ9D6R3 140 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Kiaa1109A2AAE1 5005 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Birc6O88738 4882 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Krtap4-2B1AQ85 167 aa2.58□□□□□ -2
Usp54-202ENSMUST00000035340 Lce1eQ9D139 143 aa2.58□□□□□ -2
Usp54-202ENSMUST00000035340 HydinQ80W93 5154 aa2.57□□□□□ -2
Usp54-202ENSMUST00000035340 Kmt2cQ8BRH4 4903 aa2.56□□□□□ -2
Usp54-202ENSMUST00000035340 PcloQ9QYX7 5068 aa2.52□□□□□ -2.01
Usp54-202ENSMUST00000035340 Mt4P47945 62 aa2.51□□□□□ -2.01
Usp54-202ENSMUST00000035340 Krtap17-1A2A5X6 109 aa2.49□□□□□ -2.01
Usp54-202ENSMUST00000035340 4932415D10RikA0A1W2P6U8 4986 aa2.47□□□□□ -2.01
Usp54-202ENSMUST00000035340 Krtap4-6Q3V4B7 195 aa2.46□□□□□ -2.02
Usp54-202ENSMUST00000035340 Abca13Q5SSE9 5034 aa2.42□□□□□ -2.02
Usp54-202ENSMUST00000035340 Eppk1Q8R0W0 6548 aa2.42□□□□□ -2.02
Usp54-202ENSMUST00000035340 Gm11596B1AQB0 205 aa2.41□□□□□ -2.02
Usp54-202ENSMUST00000035340 Muc5bE9Q5I3 4800 aa2.39□□□□□ -2.03
Usp54-202ENSMUST00000035340 Krtap4-1Q3UUY3 169 aa2.39□□□□□ -2.03
Usp54-202ENSMUST00000035340 Gm11938Q9D3H4 131 aa2.36□□□□□ -2.03
Usp54-202ENSMUST00000035340 Gm11564A2A4L9 201 aa2.36□□□□□ -2.03
Usp54-202ENSMUST00000035340 Gm11563B1AQ90 168 aa2.36□□□□□ -2.03
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms