RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Sprr2a1Q9CQK8 83 aa5.96□□□□□ -1.45
Col4a1-201ENSMUST00000033898 Sprr2gO70558 76 aa5.94□□□□□ -1.46
Col4a1-201ENSMUST00000033898 Dnah17Q69Z23 4481 aa5.94□□□□□ -1.46
Col4a1-201ENSMUST00000033898 Krtap1-4Q3V2D6 188 aa5.93□□□□□ -1.46
Col4a1-201ENSMUST00000033898 TnxbO35452 4006 aa5.88□□□□□ -1.47
Col4a1-201ENSMUST00000033898 Krtap19-9bQ99NG9 58 aa5.88□□□□□ -1.47
Col4a1-201ENSMUST00000033898 Dnah3Q8BW94 4083 aa5.85□□□□□ -1.47
Col4a1-201ENSMUST00000033898 Dnah1E9Q8T7 4250 aa5.84□□□□□ -1.47
Col4a1-201ENSMUST00000033898 Krtap12-1Q9Z287 130 aa5.82□□□□□ -1.48
Col4a1-201ENSMUST00000033898 Dnah9B1AR51 4484 aa5.79□□□□□ -1.48
Col4a1-201ENSMUST00000033898 Dnah2P0C6F1 4456 aa5.79□□□□□ -1.48
Col4a1-201ENSMUST00000033898 ApobE9Q414 4505 aa5.79□□□□□ -1.48
Col4a1-201ENSMUST00000033898 Dnah5Q8VHE6 4621 aa5.78□□□□□ -1.48
Col4a1-201ENSMUST00000033898 Dync2h1Q45VK7 4306 aa5.77□□□□□ -1.49
Col4a1-201ENSMUST00000033898 Fras1Q80T14 4010 aa5.77□□□□□ -1.49
Col4a1-201ENSMUST00000033898 Vps13dB1ART2 4390 aa5.74□□□□□ -1.49
Col4a1-201ENSMUST00000033898 Dnah7cA0A087WR13 4024 aa5.69□□□□□ -1.5
Col4a1-201ENSMUST00000033898 Dnah7aE9Q0T8 4024 aa5.69□□□□□ -1.5
Col4a1-201ENSMUST00000033898 Lce3bQ9CQM7 98 aa5.65□□□□□ -1.51
Col4a1-201ENSMUST00000033898 Vps13bQ80TY5 3993 aa5.64□□□□□ -1.51
Col4a1-201ENSMUST00000033898 PlecQ9QXS1 4691 aaKnown RBP5.64□□□□□ -1.51
Col4a1-201ENSMUST00000033898 Stard9Q80TF6 4561 aa5.57□□□□□ -1.52
Col4a1-201ENSMUST00000033898 Lce1mQ9CR91 182 aa5.56□□□□□ -1.52
Col4a1-201ENSMUST00000033898 Lce3cQ91V05 98 aa5.56□□□□□ -1.52
Col4a1-201ENSMUST00000033898 Gm10272F7CZ33 110 aa5.51□□□□□ -1.53
Col4a1-201ENSMUST00000033898 Pkd1O08852 4293 aa5.49□□□□□ -1.53
Col4a1-201ENSMUST00000033898 Fat2Q5F226 4351 aa5.49□□□□□ -1.53
Col4a1-201ENSMUST00000033898 2310046K23RikA0A0A6YVW6 87 aa5.48□□□□□ -1.53
Col4a1-201ENSMUST00000033898 Krtap9-5A2A5X3 358 aa5.47□□□□□ -1.53
Col4a1-201ENSMUST00000033898 Gm38119A0A0A6YX29 146 aa5.43□□□□□ -1.54
Col4a1-201ENSMUST00000033898 Gm10100J3QK64 120 aa5.42□□□□□ -1.54
Col4a1-201ENSMUST00000033898 SacsQ9JLC8 4582 aa5.41□□□□□ -1.54
Col4a1-201ENSMUST00000033898 Lce3eF8VQJ0 98 aa5.38□□□□□ -1.55
Col4a1-201ENSMUST00000033898 Lce3fQ6PAI4 98 aa5.38□□□□□ -1.55
Col4a1-201ENSMUST00000033898 Lrp1bQ9JI18 4599 aa5.37□□□□□ -1.55
Col4a1-201ENSMUST00000033898 Dync1h1Q9JHU4 4644 aaKnown RBP5.36□□□□□ -1.55
Col4a1-201ENSMUST00000033898 Hectd4E9Q2E4 4418 aa5.35□□□□□ -1.55
Col4a1-201ENSMUST00000033898 Sprr2iO70560 76 aa5.32□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Lce3dE9Q8V1 98 aa5.32□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Lce1jD3YUU5 139 aa5.31□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Lce1gQ9D195 139 aa5.31□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Lce1iQ9D6P5 149 aa5.31□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Lce1hQ9D6R3 140 aa5.31□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Gm10142J3KMP7 120 aa5.27□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Fat1A0A1L1SQU7 4645 aa5.26□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Mycbp2Q7TPH6 4711 aa5.25□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Lrp1Q91ZX7 4545 aaKnown RBP5.24□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Lce3aQ497I5 98 aa5.22□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Krtap16-3Q8C1I6 86 aa5.22□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Fat3Q8BNA6 4555 aa5.21□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Krtap19-3Q925H6 87 aa5.21□□□□□ -1.58
Col4a1-201ENSMUST00000033898 Pkhd1E9PZ36 4059 aa5.17□□□□□ -1.58
Col4a1-201ENSMUST00000033898 Pkhd1l1Q80ZA4 4249 aa5.13□□□□□ -1.59
Col4a1-201ENSMUST00000033898 Krtap22-2J3QNX6 67 aa5.12□□□□□ -1.59
Col4a1-201ENSMUST00000033898 Mt2P02798 61 aa5.12□□□□□ -1.59
Col4a1-201ENSMUST00000033898 Sprr2fO70557 76 aa5.11□□□□□ -1.59
Col4a1-201ENSMUST00000033898 Lce1fB9EJP6 147 aa5.03□□□□□ -1.6
Col4a1-201ENSMUST00000033898 Lce1cQ9D1C5 147 aa5.03□□□□□ -1.6
Col4a1-201ENSMUST00000033898 Lce1lQ9D1G7 135 aa5.03□□□□□ -1.6
Col4a1-201ENSMUST00000033898 Lce1dQ9D731 133 aa5.03□□□□□ -1.6
Col4a1-201ENSMUST00000033898 Lce1bQ9D149 137 aa5.03□□□□□ -1.6
Col4a1-201ENSMUST00000033898 Gm10024A0A0A0MQA4 119 aa5.02□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Sprr2eO70556 76 aa5.02□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Krtap1-3A2A588 173 aa4.98□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Krtap19-1Q925H2 87 aa4.98□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Ryr1E9PZQ0 5035 aa4.97□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Prm1P02319 51 aa4.96□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Ryr3A2AGL3 4863 aa4.94□□□□□ -1.62
Col4a1-201ENSMUST00000033898 Lce1eQ9D139 143 aa4.94□□□□□ -1.62
Col4a1-201ENSMUST00000033898 Krtap19-2Q925I0 141 aa4.89□□□□□ -1.63
Col4a1-201ENSMUST00000033898 Gm7735D3YX18 52 aa4.87□□□□□ -1.63
Col4a1-201ENSMUST00000033898 Lrp2A2ARV4 4660 aa4.85□□□□□ -1.63
Col4a1-201ENSMUST00000033898 Gm11569B1AQB1 180 aa4.82□□□□□ -1.64
Col4a1-201ENSMUST00000033898 Dnah8Q91XQ0 4731 aa4.82□□□□□ -1.64
Col4a1-201ENSMUST00000033898 Gm9789Q8BIG3 52 aa4.81□□□□□ -1.64
Col4a1-201ENSMUST00000033898 Mt4P47945 62 aa4.78□□□□□ -1.64
Col4a1-201ENSMUST00000033898 Dnhd1D3Z2X2 4750 aa4.72□□□□□ -1.65
Col4a1-201ENSMUST00000033898 Kmt2cQ8BRH4 4903 aa4.72□□□□□ -1.65
Col4a1-201ENSMUST00000033898 Krtap4-2B1AQ85 167 aa4.71□□□□□ -1.66
Col4a1-201ENSMUST00000033898 Gm10061D3Z714 54 aa4.68□□□□□ -1.66
Col4a1-201ENSMUST00000033898 Krtap4-6Q3V4B7 195 aa4.64□□□□□ -1.67
Col4a1-201ENSMUST00000033898 Krtap19-4Q925H7 84 aa4.63□□□□□ -1.67
Col4a1-201ENSMUST00000033898 Krtap9-3Q3V2C1 136 aa4.6□□□□□ -1.67
Col4a1-201ENSMUST00000033898 Ryr2E9Q401 4966 aaKnown RBP4.58□□□□□ -1.68
Col4a1-201ENSMUST00000033898 Herc2Q4U2R1 4836 aa4.56□□□□□ -1.68
Col4a1-201ENSMUST00000033898 Krtap17-1A2A5X6 109 aa4.51□□□□□ -1.69
Col4a1-201ENSMUST00000033898 Krtap4-1Q3UUY3 169 aa4.42□□□□□ -1.7
Col4a1-201ENSMUST00000033898 Herc1E9PZP8 4859 aa4.4□□□□□ -1.7
Col4a1-201ENSMUST00000033898 HydinQ80W93 5154 aa4.38□□□□□ -1.71
Col4a1-201ENSMUST00000033898 Gm11596B1AQB0 205 aa4.37□□□□□ -1.71
Col4a1-201ENSMUST00000033898 PcloQ9QYX7 5068 aa4.37□□□□□ -1.71
Col4a1-201ENSMUST00000033898 Lce1a2Q9D1K4 149 aa4.35□□□□□ -1.71
Col4a1-201ENSMUST00000033898 2300003K06RikA2A4M0 262 aa4.34□□□□□ -1.71
Col4a1-201ENSMUST00000033898 Abca13Q5SSE9 5034 aa4.34□□□□□ -1.71
Col4a1-201ENSMUST00000033898 Sprr2dO70555 85 aa4.33□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Sprr2hO70559 108 aa4.32□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Krtap31-1Q9D644 177 aa4.31□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Gm11564A2A4L9 201 aa4.3□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Gm11563B1AQ90 168 aa4.3□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Gm11595B1AQA7 289 aa4.3□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 92.5 ms