RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Vps13bQ80TY5 3993 aa5,81□□□□□ -1,48
Col7a1-201ENSMUST00000026740 Huwe1Q7TMY8 4377 aaKnown RBP5,78□□□□□ -1,48
Col7a1-201ENSMUST00000026740 Kmt2aP55200 3966 aa5,75□□□□□ -1,49
Col7a1-201ENSMUST00000026740 TnxbO35452 4006 aa5,71□□□□□ -1,5
Col7a1-201ENSMUST00000026740 PrkdcP97313 4128 aa5,7□□□□□ -1,5
Col7a1-201ENSMUST00000026740 Lce3bQ9CQM7 98 aa5,58□□□□□ -1,52
Col7a1-201ENSMUST00000026740 Dnah6E9Q0B6 4144 aa5,58□□□□□ -1,52
Col7a1-201ENSMUST00000026740 Fras1Q80T14 4010 aa5,55□□□□□ -1,52
Col7a1-201ENSMUST00000026740 Gm10100J3QK64 120 aa5,54□□□□□ -1,52
Col7a1-201ENSMUST00000026740 Dnah10D3YYQ8 4591 aa5,5□□□□□ -1,53
Col7a1-201ENSMUST00000026740 Lce3cQ91V05 98 aa5,49□□□□□ -1,53
Col7a1-201ENSMUST00000026740 LorP18165 486 aa5,45□□□□□ -1,54
Col7a1-201ENSMUST00000026740 Dnah14A0A140LIJ4 4489 aa5,44□□□□□ -1,54
Col7a1-201ENSMUST00000026740 Gm10142J3KMP7 120 aa5,41□□□□□ -1,54
Col7a1-201ENSMUST00000026740 Dnah1E9Q8T7 4250 aa5,38□□□□□ -1,55
Col7a1-201ENSMUST00000026740 2310046K23RikA0A0A6YVW6 87 aa5,37□□□□□ -1,55
Col7a1-201ENSMUST00000026740 Lce3dE9Q8V1 98 aa5,36□□□□□ -1,55
Col7a1-201ENSMUST00000026740 Lce3eF8VQJ0 98 aa5,36□□□□□ -1,55
Col7a1-201ENSMUST00000026740 Lce3fQ6PAI4 98 aa5,36□□□□□ -1,55
Col7a1-201ENSMUST00000026740 Gm10272F7CZ33 110 aa5,35□□□□□ -1,55
Col7a1-201ENSMUST00000026740 Vps13dB1ART2 4390 aa5,28□□□□□ -1,56
Col7a1-201ENSMUST00000026740 Lce3aQ497I5 98 aa5,23□□□□□ -1,57
Col7a1-201ENSMUST00000026740 Krtap31-2Q8CAY5 177 aa5,2□□□□□ -1,58
Col7a1-201ENSMUST00000026740 Sprr2iO70560 76 aa5,18□□□□□ -1,58
Col7a1-201ENSMUST00000026740 Dync2h1Q45VK7 4306 aa5,16□□□□□ -1,58
Col7a1-201ENSMUST00000026740 Krtap31-1Q9D644 177 aa5,13□□□□□ -1,59
Col7a1-201ENSMUST00000026740 Pkhd1E9PZ36 4059 aa5,12□□□□□ -1,59
Col7a1-201ENSMUST00000026740 Hectd4E9Q2E4 4418 aa5,11□□□□□ -1,59
Col7a1-201ENSMUST00000026740 Gm10024A0A0A0MQA4 119 aa5,08□□□□□ -1,6
Col7a1-201ENSMUST00000026740 Krtap16-3Q8C1I6 86 aa5,07□□□□□ -1,6
Col7a1-201ENSMUST00000026740 Sprr2fO70557 76 aa5,06□□□□□ -1,6
Col7a1-201ENSMUST00000026740 Dnah5Q8VHE6 4621 aa5,02□□□□□ -1,61
Col7a1-201ENSMUST00000026740 Lce1mQ9CR91 182 aa5,01□□□□□ -1,61
Col7a1-201ENSMUST00000026740 Krtap22-2J3QNX6 67 aa5□□□□□ -1,61
Col7a1-201ENSMUST00000026740 Krtap9-5A2A5X3 358 aa4,99□□□□□ -1,61
Col7a1-201ENSMUST00000026740 Dnah17Q69Z23 4481 aa4,94□□□□□ -1,62
Col7a1-201ENSMUST00000026740 Dnah2P0C6F1 4456 aa4,93□□□□□ -1,62
Col7a1-201ENSMUST00000026740 Mt2P02798 61 aa4,92□□□□□ -1,62
Col7a1-201ENSMUST00000026740 Sprr2eO70556 76 aa4,88□□□□□ -1,63
Col7a1-201ENSMUST00000026740 Dnah11E9Q7N9 4488 aa4,88□□□□□ -1,63
Col7a1-201ENSMUST00000026740 Lrp1Q91ZX7 4545 aaKnown RBP4,88□□□□□ -1,63
Col7a1-201ENSMUST00000026740 Krtap19-3Q925H6 87 aa4,87□□□□□ -1,63
Col7a1-201ENSMUST00000026740 Krtap19-4Q925H7 84 aa4,87□□□□□ -1,63
Col7a1-201ENSMUST00000026740 Dnah9B1AR51 4484 aa4,86□□□□□ -1,63
Col7a1-201ENSMUST00000026740 Prm1P02319 51 aa4,84□□□□□ -1,63
Col7a1-201ENSMUST00000026740 Lce1jD3YUU5 139 aa4,83□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Lce1gQ9D195 139 aa4,83□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Lce1iQ9D6P5 149 aa4,83□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Lce1hQ9D6R3 140 aa4,83□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Lce1bQ9D149 137 aa4,82□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Pkd1O08852 4293 aa4,81□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Krtap19-2Q925I0 141 aa4,8□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Lce1fB9EJP6 147 aa4,79□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Lce1cQ9D1C5 147 aa4,79□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Lce1lQ9D1G7 135 aa4,79□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Lce1dQ9D731 133 aa4,79□□□□□ -1,64
Col7a1-201ENSMUST00000026740 Stard9Q80TF6 4561 aa4,78□□□□□ -1,64
Col7a1-201ENSMUST00000026740 PlecQ9QXS1 4691 aaKnown RBP4,77□□□□□ -1,65
Col7a1-201ENSMUST00000026740 Lce1eQ9D139 143 aa4,76□□□□□ -1,65
Col7a1-201ENSMUST00000026740 ApobE9Q414 4505 aa4,76□□□□□ -1,65
Col7a1-201ENSMUST00000026740 Pkhd1l1Q80ZA4 4249 aa4,76□□□□□ -1,65
Col7a1-201ENSMUST00000026740 Gm38119A0A0A6YX29 146 aa4,75□□□□□ -1,65
Col7a1-201ENSMUST00000026740 Krtap9-3Q3V2C1 136 aa4,72□□□□□ -1,65
Col7a1-201ENSMUST00000026740 Krtap19-1Q925H2 87 aa4,67□□□□□ -1,66
Col7a1-201ENSMUST00000026740 Dync1h1Q9JHU4 4644 aaKnown RBP4,61□□□□□ -1,67
Col7a1-201ENSMUST00000026740 Mt3P28184 68 aa4,59□□□□□ -1,67
Col7a1-201ENSMUST00000026740 Fat1A0A1L1SQU7 4645 aa4,58□□□□□ -1,68
Col7a1-201ENSMUST00000026740 Sprr2hO70559 108 aa4,58□□□□□ -1,68
Col7a1-201ENSMUST00000026740 Mycbp2Q7TPH6 4711 aa4,58□□□□□ -1,68
Col7a1-201ENSMUST00000026740 Dnah8Q91XQ0 4731 aa4,56□□□□□ -1,68
Col7a1-201ENSMUST00000026740 Ryr1E9PZQ0 5035 aa4,56□□□□□ -1,68
Col7a1-201ENSMUST00000026740 SacsQ9JLC8 4582 aa4,56□□□□□ -1,68
Col7a1-201ENSMUST00000026740 Lrp1bQ9JI18 4599 aa4,54□□□□□ -1,68
Col7a1-201ENSMUST00000026740 Fat2Q5F226 4351 aa4,49□□□□□ -1,69
Col7a1-201ENSMUST00000026740 Gm7735D3YX18 52 aa4,45□□□□□ -1,7
Col7a1-201ENSMUST00000026740 Gm9789Q8BIG3 52 aa4,4□□□□□ -1,7
Col7a1-201ENSMUST00000026740 Fat3Q8BNA6 4555 aa4,36□□□□□ -1,71
Col7a1-201ENSMUST00000026740 Sprr2dO70555 85 aa4,31□□□□□ -1,72
Col7a1-201ENSMUST00000026740 Krtap1-3A2A588 173 aa4,29□□□□□ -1,72
Col7a1-201ENSMUST00000026740 Gm10061D3Z714 54 aa4,27□□□□□ -1,73
Col7a1-201ENSMUST00000026740 Gm11569B1AQB1 180 aa4,25□□□□□ -1,73
Col7a1-201ENSMUST00000026740 Gm11562A0PK51 136 aa4,2□□□□□ -1,74
Col7a1-201ENSMUST00000026740 Mt4P47945 62 aa4,18□□□□□ -1,74
Col7a1-201ENSMUST00000026740 Gm11938Q9D3H4 131 aa4,16□□□□□ -1,74
Col7a1-201ENSMUST00000026740 Dnhd1D3Z2X2 4750 aa4,09□□□□□ -1,75
Col7a1-201ENSMUST00000026740 Krtap4-2B1AQ85 167 aa3,99□□□□□ -1,77
Col7a1-201ENSMUST00000026740 Kmt2cQ8BRH4 4903 aa3,96□□□□□ -1,78
Col7a1-201ENSMUST00000026740 Sprr2bO70554 98 aa3,96□□□□□ -1,78
Col7a1-201ENSMUST00000026740 Lrp2A2ARV4 4660 aa3,94□□□□□ -1,78
Col7a1-201ENSMUST00000026740 Krtap4-6Q3V4B7 195 aa3,94□□□□□ -1,78
Col7a1-201ENSMUST00000026740 Krtap4-7Q9D732 168 aa3,87□□□□□ -1,79
Col7a1-201ENSMUST00000026740 PcloQ9QYX7 5068 aa3,87□□□□□ -1,79
Col7a1-201ENSMUST00000026740 ZanO88799 5376 aa3,85□□□□□ -1,79
Col7a1-201ENSMUST00000026740 Herc2Q4U2R1 4836 aa3,85□□□□□ -1,79
Col7a1-201ENSMUST00000026740 Ryr2E9Q401 4966 aaKnown RBP3,84□□□□□ -1,79
Col7a1-201ENSMUST00000026740 Lce1a2Q9D1K4 149 aa3,83□□□□□ -1,8
Col7a1-201ENSMUST00000026740 Lce1a1Q9CQH5 143 aa3,81□□□□□ -1,8
Col7a1-201ENSMUST00000026740 Mt1P02802 61 aaKnown RBP3,81□□□□□ -1,8
Col7a1-201ENSMUST00000026740 2300003K06RikA2A4M0 262 aa3,8□□□□□ -1,8
Col7a1-201ENSMUST00000026740 Lce1kJ3QP15 125 aa3,77□□□□□ -1,81
Retrieved 100 of 22,080 RNA–protein pairs in 52,3 ms