RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Vps13bQ80TY5 3993 aa5.81□□□□□ -1.48
Col7a1-201ENSMUST00000026740 Huwe1Q7TMY8 4377 aaKnown RBP5.78□□□□□ -1.48
Col7a1-201ENSMUST00000026740 Kmt2aP55200 3966 aa5.75□□□□□ -1.49
Col7a1-201ENSMUST00000026740 TnxbO35452 4006 aa5.71□□□□□ -1.5
Col7a1-201ENSMUST00000026740 PrkdcP97313 4128 aa5.7□□□□□ -1.5
Col7a1-201ENSMUST00000026740 Lce3bQ9CQM7 98 aa5.58□□□□□ -1.52
Col7a1-201ENSMUST00000026740 Dnah6E9Q0B6 4144 aa5.58□□□□□ -1.52
Col7a1-201ENSMUST00000026740 Fras1Q80T14 4010 aa5.55□□□□□ -1.52
Col7a1-201ENSMUST00000026740 Gm10100J3QK64 120 aa5.54□□□□□ -1.52
Col7a1-201ENSMUST00000026740 Dnah10D3YYQ8 4591 aa5.5□□□□□ -1.53
Col7a1-201ENSMUST00000026740 Lce3cQ91V05 98 aa5.49□□□□□ -1.53
Col7a1-201ENSMUST00000026740 LorP18165 486 aa5.45□□□□□ -1.54
Col7a1-201ENSMUST00000026740 Dnah14A0A140LIJ4 4489 aa5.44□□□□□ -1.54
Col7a1-201ENSMUST00000026740 Gm10142J3KMP7 120 aa5.41□□□□□ -1.54
Col7a1-201ENSMUST00000026740 Dnah1E9Q8T7 4250 aa5.38□□□□□ -1.55
Col7a1-201ENSMUST00000026740 2310046K23RikA0A0A6YVW6 87 aa5.37□□□□□ -1.55
Col7a1-201ENSMUST00000026740 Lce3dE9Q8V1 98 aa5.36□□□□□ -1.55
Col7a1-201ENSMUST00000026740 Lce3eF8VQJ0 98 aa5.36□□□□□ -1.55
Col7a1-201ENSMUST00000026740 Lce3fQ6PAI4 98 aa5.36□□□□□ -1.55
Col7a1-201ENSMUST00000026740 Gm10272F7CZ33 110 aa5.35□□□□□ -1.55
Col7a1-201ENSMUST00000026740 Vps13dB1ART2 4390 aa5.28□□□□□ -1.56
Col7a1-201ENSMUST00000026740 Lce3aQ497I5 98 aa5.23□□□□□ -1.57
Col7a1-201ENSMUST00000026740 Krtap31-2Q8CAY5 177 aa5.2□□□□□ -1.58
Col7a1-201ENSMUST00000026740 Sprr2iO70560 76 aa5.18□□□□□ -1.58
Col7a1-201ENSMUST00000026740 Dync2h1Q45VK7 4306 aa5.16□□□□□ -1.58
Col7a1-201ENSMUST00000026740 Krtap31-1Q9D644 177 aa5.13□□□□□ -1.59
Col7a1-201ENSMUST00000026740 Pkhd1E9PZ36 4059 aa5.12□□□□□ -1.59
Col7a1-201ENSMUST00000026740 Hectd4E9Q2E4 4418 aa5.11□□□□□ -1.59
Col7a1-201ENSMUST00000026740 Gm10024A0A0A0MQA4 119 aa5.08□□□□□ -1.6
Col7a1-201ENSMUST00000026740 Krtap16-3Q8C1I6 86 aa5.07□□□□□ -1.6
Col7a1-201ENSMUST00000026740 Sprr2fO70557 76 aa5.06□□□□□ -1.6
Col7a1-201ENSMUST00000026740 Dnah5Q8VHE6 4621 aa5.02□□□□□ -1.61
Col7a1-201ENSMUST00000026740 Lce1mQ9CR91 182 aa5.01□□□□□ -1.61
Col7a1-201ENSMUST00000026740 Krtap22-2J3QNX6 67 aa5□□□□□ -1.61
Col7a1-201ENSMUST00000026740 Krtap9-5A2A5X3 358 aa4.99□□□□□ -1.61
Col7a1-201ENSMUST00000026740 Dnah17Q69Z23 4481 aa4.94□□□□□ -1.62
Col7a1-201ENSMUST00000026740 Dnah2P0C6F1 4456 aa4.93□□□□□ -1.62
Col7a1-201ENSMUST00000026740 Mt2P02798 61 aa4.92□□□□□ -1.62
Col7a1-201ENSMUST00000026740 Sprr2eO70556 76 aa4.88□□□□□ -1.63
Col7a1-201ENSMUST00000026740 Dnah11E9Q7N9 4488 aa4.88□□□□□ -1.63
Col7a1-201ENSMUST00000026740 Lrp1Q91ZX7 4545 aaKnown RBP4.88□□□□□ -1.63
Col7a1-201ENSMUST00000026740 Krtap19-3Q925H6 87 aa4.87□□□□□ -1.63
Col7a1-201ENSMUST00000026740 Krtap19-4Q925H7 84 aa4.87□□□□□ -1.63
Col7a1-201ENSMUST00000026740 Dnah9B1AR51 4484 aa4.86□□□□□ -1.63
Col7a1-201ENSMUST00000026740 Prm1P02319 51 aa4.84□□□□□ -1.63
Col7a1-201ENSMUST00000026740 Lce1jD3YUU5 139 aa4.83□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Lce1gQ9D195 139 aa4.83□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Lce1iQ9D6P5 149 aa4.83□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Lce1hQ9D6R3 140 aa4.83□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Lce1bQ9D149 137 aa4.82□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Pkd1O08852 4293 aa4.81□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Krtap19-2Q925I0 141 aa4.8□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Lce1fB9EJP6 147 aa4.79□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Lce1cQ9D1C5 147 aa4.79□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Lce1lQ9D1G7 135 aa4.79□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Lce1dQ9D731 133 aa4.79□□□□□ -1.64
Col7a1-201ENSMUST00000026740 Stard9Q80TF6 4561 aa4.78□□□□□ -1.64
Col7a1-201ENSMUST00000026740 PlecQ9QXS1 4691 aaKnown RBP4.77□□□□□ -1.65
Col7a1-201ENSMUST00000026740 Lce1eQ9D139 143 aa4.76□□□□□ -1.65
Col7a1-201ENSMUST00000026740 ApobE9Q414 4505 aa4.76□□□□□ -1.65
Col7a1-201ENSMUST00000026740 Pkhd1l1Q80ZA4 4249 aa4.76□□□□□ -1.65
Col7a1-201ENSMUST00000026740 Gm38119A0A0A6YX29 146 aa4.75□□□□□ -1.65
Col7a1-201ENSMUST00000026740 Krtap9-3Q3V2C1 136 aa4.72□□□□□ -1.65
Col7a1-201ENSMUST00000026740 Krtap19-1Q925H2 87 aa4.67□□□□□ -1.66
Col7a1-201ENSMUST00000026740 Dync1h1Q9JHU4 4644 aaKnown RBP4.61□□□□□ -1.67
Col7a1-201ENSMUST00000026740 Mt3P28184 68 aa4.59□□□□□ -1.67
Col7a1-201ENSMUST00000026740 Fat1A0A1L1SQU7 4645 aa4.58□□□□□ -1.68
Col7a1-201ENSMUST00000026740 Sprr2hO70559 108 aa4.58□□□□□ -1.68
Col7a1-201ENSMUST00000026740 Mycbp2Q7TPH6 4711 aa4.58□□□□□ -1.68
Col7a1-201ENSMUST00000026740 Dnah8Q91XQ0 4731 aa4.56□□□□□ -1.68
Col7a1-201ENSMUST00000026740 Ryr1E9PZQ0 5035 aa4.56□□□□□ -1.68
Col7a1-201ENSMUST00000026740 SacsQ9JLC8 4582 aa4.56□□□□□ -1.68
Col7a1-201ENSMUST00000026740 Lrp1bQ9JI18 4599 aa4.54□□□□□ -1.68
Col7a1-201ENSMUST00000026740 Fat2Q5F226 4351 aa4.49□□□□□ -1.69
Col7a1-201ENSMUST00000026740 Gm7735D3YX18 52 aa4.45□□□□□ -1.7
Col7a1-201ENSMUST00000026740 Gm9789Q8BIG3 52 aa4.4□□□□□ -1.7
Col7a1-201ENSMUST00000026740 Fat3Q8BNA6 4555 aa4.36□□□□□ -1.71
Col7a1-201ENSMUST00000026740 Sprr2dO70555 85 aa4.31□□□□□ -1.72
Col7a1-201ENSMUST00000026740 Krtap1-3A2A588 173 aa4.29□□□□□ -1.72
Col7a1-201ENSMUST00000026740 Gm10061D3Z714 54 aa4.27□□□□□ -1.73
Col7a1-201ENSMUST00000026740 Gm11569B1AQB1 180 aa4.25□□□□□ -1.73
Col7a1-201ENSMUST00000026740 Gm11562A0PK51 136 aa4.2□□□□□ -1.74
Col7a1-201ENSMUST00000026740 Mt4P47945 62 aa4.18□□□□□ -1.74
Col7a1-201ENSMUST00000026740 Gm11938Q9D3H4 131 aa4.16□□□□□ -1.74
Col7a1-201ENSMUST00000026740 Dnhd1D3Z2X2 4750 aa4.09□□□□□ -1.75
Col7a1-201ENSMUST00000026740 Krtap4-2B1AQ85 167 aa3.99□□□□□ -1.77
Col7a1-201ENSMUST00000026740 Kmt2cQ8BRH4 4903 aa3.96□□□□□ -1.78
Col7a1-201ENSMUST00000026740 Sprr2bO70554 98 aa3.96□□□□□ -1.78
Col7a1-201ENSMUST00000026740 Lrp2A2ARV4 4660 aa3.94□□□□□ -1.78
Col7a1-201ENSMUST00000026740 Krtap4-6Q3V4B7 195 aa3.94□□□□□ -1.78
Col7a1-201ENSMUST00000026740 Krtap4-7Q9D732 168 aa3.87□□□□□ -1.79
Col7a1-201ENSMUST00000026740 PcloQ9QYX7 5068 aa3.87□□□□□ -1.79
Col7a1-201ENSMUST00000026740 ZanO88799 5376 aa3.85□□□□□ -1.79
Col7a1-201ENSMUST00000026740 Herc2Q4U2R1 4836 aa3.85□□□□□ -1.79
Col7a1-201ENSMUST00000026740 Ryr2E9Q401 4966 aaKnown RBP3.84□□□□□ -1.79
Col7a1-201ENSMUST00000026740 Lce1a2Q9D1K4 149 aa3.83□□□□□ -1.8
Col7a1-201ENSMUST00000026740 Lce1a1Q9CQH5 143 aa3.81□□□□□ -1.8
Col7a1-201ENSMUST00000026740 Mt1P02802 61 aaKnown RBP3.81□□□□□ -1.8
Col7a1-201ENSMUST00000026740 2300003K06RikA2A4M0 262 aa3.8□□□□□ -1.8
Col7a1-201ENSMUST00000026740 Lce1kJ3QP15 125 aa3.77□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms