RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Csmd3Q80T79 3707 aa5.87□□□□□ -1.47
Col1a1-201ENSMUST00000001547 Krtap8-1O08633 61 aa5.87□□□□□ -1.47
Col1a1-201ENSMUST00000001547 TnxbO35452 4006 aa5.83□□□□□ -1.48
Col1a1-201ENSMUST00000001547 Dnah9B1AR51 4484 aa5.83□□□□□ -1.48
Col1a1-201ENSMUST00000001547 Sprr2kO70562 68 aa5.82□□□□□ -1.48
Col1a1-201ENSMUST00000001547 ApobE9Q414 4505 aa5.81□□□□□ -1.48
Col1a1-201ENSMUST00000001547 Dync1h1Q9JHU4 4644 aaKnown RBP5.81□□□□□ -1.48
Col1a1-201ENSMUST00000001547 Gm19402J3QJV4 266 aa5.79□□□□□ -1.48
Col1a1-201ENSMUST00000001547 Krtap19-9bQ99NG9 58 aa5.79□□□□□ -1.48
Col1a1-201ENSMUST00000001547 Krtap12-1Q9Z287 130 aa5.79□□□□□ -1.48
Col1a1-201ENSMUST00000001547 Dnah2P0C6F1 4456 aa5.78□□□□□ -1.48
Col1a1-201ENSMUST00000001547 Dnah1E9Q8T7 4250 aa5.74□□□□□ -1.49
Col1a1-201ENSMUST00000001547 Dnah3Q8BW94 4083 aa5.73□□□□□ -1.49
Col1a1-201ENSMUST00000001547 PrkdcP97313 4128 aa5.73□□□□□ -1.49
Col1a1-201ENSMUST00000001547 Dnah7bL7N1Y0 4068 aa5.73□□□□□ -1.49
Col1a1-201ENSMUST00000001547 SacsQ9JLC8 4582 aa5.68□□□□□ -1.5
Col1a1-201ENSMUST00000001547 Pkd1O08852 4293 aa5.64□□□□□ -1.51
Col1a1-201ENSMUST00000001547 Lrp1bQ9JI18 4599 aa5.62□□□□□ -1.51
Col1a1-201ENSMUST00000001547 Lce1mQ9CR91 182 aa5.6□□□□□ -1.51
Col1a1-201ENSMUST00000001547 Dnah6E9Q0B6 4144 aa5.59□□□□□ -1.51
Col1a1-201ENSMUST00000001547 Fat1A0A1L1SQU7 4645 aa5.56□□□□□ -1.52
Col1a1-201ENSMUST00000001547 Kmt2aP55200 3966 aa5.55□□□□□ -1.52
Col1a1-201ENSMUST00000001547 Mycbp2Q7TPH6 4711 aa5.54□□□□□ -1.52
Col1a1-201ENSMUST00000001547 Ryr1E9PZQ0 5035 aa5.52□□□□□ -1.53
Col1a1-201ENSMUST00000001547 Sprr2gO70558 76 aa5.51□□□□□ -1.53
Col1a1-201ENSMUST00000001547 Krtap16-3Q8C1I6 86 aa5.5□□□□□ -1.53
Col1a1-201ENSMUST00000001547 Krtap19-3Q925H6 87 aa5.48□□□□□ -1.53
Col1a1-201ENSMUST00000001547 Hectd4E9Q2E4 4418 aa5.48□□□□□ -1.53
Col1a1-201ENSMUST00000001547 Krtap9-5A2A5X3 358 aa5.41□□□□□ -1.54
Col1a1-201ENSMUST00000001547 Fat3Q8BNA6 4555 aa5.41□□□□□ -1.54
Col1a1-201ENSMUST00000001547 Fras1Q80T14 4010 aa5.39□□□□□ -1.55
Col1a1-201ENSMUST00000001547 Dnah8Q91XQ0 4731 aa5.39□□□□□ -1.55
Col1a1-201ENSMUST00000001547 Krtap19-1Q925H2 87 aa5.36□□□□□ -1.55
Col1a1-201ENSMUST00000001547 Prm1P02319 51 aa5.32□□□□□ -1.56
Col1a1-201ENSMUST00000001547 Lce3bQ9CQM7 98 aa5.3□□□□□ -1.56
Col1a1-201ENSMUST00000001547 Ryr3A2AGL3 4863 aa5.3□□□□□ -1.56
Col1a1-201ENSMUST00000001547 Ryr2E9Q401 4966 aaKnown RBP5.27□□□□□ -1.57
Col1a1-201ENSMUST00000001547 Lce3cQ91V05 98 aa5.26□□□□□ -1.57
Col1a1-201ENSMUST00000001547 Gm10100J3QK64 120 aa5.25□□□□□ -1.57
Col1a1-201ENSMUST00000001547 Dnah7aE9Q0T8 4024 aa5.25□□□□□ -1.57
Col1a1-201ENSMUST00000001547 Lrp1Q91ZX7 4545 aaKnown RBP5.23□□□□□ -1.57
Col1a1-201ENSMUST00000001547 Dnah7cA0A087WR13 4024 aa5.2□□□□□ -1.58
Col1a1-201ENSMUST00000001547 Fat2Q5F226 4351 aa5.19□□□□□ -1.58
Col1a1-201ENSMUST00000001547 Herc2Q4U2R1 4836 aa5.16□□□□□ -1.58
Col1a1-201ENSMUST00000001547 Gm10272F7CZ33 110 aa5.16□□□□□ -1.58
Col1a1-201ENSMUST00000001547 Dnhd1D3Z2X2 4750 aa5.15□□□□□ -1.58
Col1a1-201ENSMUST00000001547 Gm10142J3KMP7 120 aa5.12□□□□□ -1.59
Col1a1-201ENSMUST00000001547 2310046K23RikA0A0A6YVW6 87 aa5.12□□□□□ -1.59
Col1a1-201ENSMUST00000001547 Mt2P02798 61 aa5.12□□□□□ -1.59
Col1a1-201ENSMUST00000001547 Gm7735D3YX18 52 aa5.11□□□□□ -1.59
Col1a1-201ENSMUST00000001547 Krtap1-3A2A588 173 aa5.1□□□□□ -1.59
Col1a1-201ENSMUST00000001547 Lce3eF8VQJ0 98 aa5.1□□□□□ -1.59
Col1a1-201ENSMUST00000001547 Lce3fQ6PAI4 98 aa5.1□□□□□ -1.59
Col1a1-201ENSMUST00000001547 Krtap22-2J3QNX6 67 aa5.08□□□□□ -1.6
Col1a1-201ENSMUST00000001547 Kiaa1109A2AAE1 5005 aa5.08□□□□□ -1.6
Col1a1-201ENSMUST00000001547 Vps13bQ80TY5 3993 aa5.08□□□□□ -1.6
Col1a1-201ENSMUST00000001547 Krtap19-2Q925I0 141 aa5.07□□□□□ -1.6
Col1a1-201ENSMUST00000001547 Lrp2A2ARV4 4660 aa5.07□□□□□ -1.6
Col1a1-201ENSMUST00000001547 Lce3dE9Q8V1 98 aa5.04□□□□□ -1.6
Col1a1-201ENSMUST00000001547 Gm9789Q8BIG3 52 aa5.03□□□□□ -1.6
Col1a1-201ENSMUST00000001547 HydinQ80W93 5154 aa5.03□□□□□ -1.61
Col1a1-201ENSMUST00000001547 Lce1jD3YUU5 139 aa5□□□□□ -1.61
Col1a1-201ENSMUST00000001547 Herc1E9PZP8 4859 aa4.98□□□□□ -1.61
Col1a1-201ENSMUST00000001547 Lce3aQ497I5 98 aa4.97□□□□□ -1.61
Col1a1-201ENSMUST00000001547 Gm38119A0A0A6YX29 146 aa4.96□□□□□ -1.62
Col1a1-201ENSMUST00000001547 Sprr2iO70560 76 aa4.9□□□□□ -1.62
Col1a1-201ENSMUST00000001547 Lce1gQ9D195 139 aa4.88□□□□□ -1.63
Col1a1-201ENSMUST00000001547 Lce1iQ9D6P5 149 aa4.88□□□□□ -1.63
Col1a1-201ENSMUST00000001547 Lce1hQ9D6R3 140 aa4.88□□□□□ -1.63
Col1a1-201ENSMUST00000001547 Kmt2cQ8BRH4 4903 aa4.87□□□□□ -1.63
Col1a1-201ENSMUST00000001547 Gm10061D3Z714 54 aa4.85□□□□□ -1.63
Col1a1-201ENSMUST00000001547 PcloQ9QYX7 5068 aa4.83□□□□□ -1.64
Col1a1-201ENSMUST00000001547 Gm10024A0A0A0MQA4 119 aa4.83□□□□□ -1.64
Col1a1-201ENSMUST00000001547 Pkhd1E9PZ36 4059 aa4.82□□□□□ -1.64
Col1a1-201ENSMUST00000001547 Pkhd1l1Q80ZA4 4249 aa4.8□□□□□ -1.64
Col1a1-201ENSMUST00000001547 Birc6O88738 4882 aa4.8□□□□□ -1.64
Col1a1-201ENSMUST00000001547 Gm11569B1AQB1 180 aa4.76□□□□□ -1.65
Col1a1-201ENSMUST00000001547 Sprr2fO70557 76 aa4.75□□□□□ -1.65
Col1a1-201ENSMUST00000001547 Sprr2eO70556 76 aa4.74□□□□□ -1.65
Col1a1-201ENSMUST00000001547 Lce1fB9EJP6 147 aa4.7□□□□□ -1.66
Col1a1-201ENSMUST00000001547 Lce1cQ9D1C5 147 aa4.7□□□□□ -1.66
Col1a1-201ENSMUST00000001547 Lce1lQ9D1G7 135 aa4.7□□□□□ -1.66
Col1a1-201ENSMUST00000001547 Lce1dQ9D731 133 aa4.7□□□□□ -1.66
Col1a1-201ENSMUST00000001547 Lce1bQ9D149 137 aa4.66□□□□□ -1.66
Col1a1-201ENSMUST00000001547 Lce1eQ9D139 143 aa4.64□□□□□ -1.67
Col1a1-201ENSMUST00000001547 Krtap4-2B1AQ85 167 aa4.63□□□□□ -1.67
Col1a1-201ENSMUST00000001547 Krtap9-3Q3V2C1 136 aa4.58□□□□□ -1.68
Col1a1-201ENSMUST00000001547 Krtap19-4Q925H7 84 aa4.56□□□□□ -1.68
Col1a1-201ENSMUST00000001547 Abca13Q5SSE9 5034 aa4.55□□□□□ -1.68
Col1a1-201ENSMUST00000001547 Lce1a2Q9D1K4 149 aa4.55□□□□□ -1.68
Col1a1-201ENSMUST00000001547 Mt4P47945 62 aa4.52□□□□□ -1.69
Col1a1-201ENSMUST00000001547 Krtap4-6Q3V4B7 195 aa4.47□□□□□ -1.69
Col1a1-201ENSMUST00000001547 4932415D10RikA0A1W2P6U8 4986 aa4.46□□□□□ -1.7
Col1a1-201ENSMUST00000001547 Mdn1A2ANY6 5589 aaKnown RBP4.44□□□□□ -1.7
Col1a1-201ENSMUST00000001547 Fat4Q2PZL6 4981 aa4.4□□□□□ -1.71
Col1a1-201ENSMUST00000001547 Ubr4A2AN08 5180 aa4.39□□□□□ -1.71
Col1a1-201ENSMUST00000001547 ZanO88799 5376 aa4.38□□□□□ -1.71
Col1a1-201ENSMUST00000001547 Krtap17-1A2A5X6 109 aa4.31□□□□□ -1.72
Col1a1-201ENSMUST00000001547 Krtap4-1Q3UUY3 169 aa4.29□□□□□ -1.72
Col1a1-201ENSMUST00000001547 Gm11596B1AQB0 205 aa4.28□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 80.1 ms