RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 LTBP3Q9NS15 1303 aa20.58■□□□□ 0.89
PHGDH-232ENST00000641947 TSPY2A6NKD2 308 aa20.58■□□□□ 0.89
PHGDH-232ENST00000641947 HMGN5P82970 282 aaKnown RBP20.58■□□□□ 0.89
PHGDH-232ENST00000641947 GABPAQ06546 454 aa20.58■□□□□ 0.89
PHGDH-232ENST00000641947 IQCA1Q86XH1 822 aa20.58■□□□□ 0.89
PHGDH-232ENST00000641947 PRMT6Q96LA8 375 aaPredicted RBP20.58■□□□□ 0.89
PHGDH-232ENST00000641947 SLURP2P0DP57 97 aa20.57■□□□□ 0.88
PHGDH-232ENST00000641947 IFIT1BQ5T764 474 aaKnown RBP20.57■□□□□ 0.88
PHGDH-232ENST00000641947 MCTP1Q6DN14 999 aa20.57■□□□□ 0.88
PHGDH-232ENST00000641947 TDRD3Q9H7E2 651 aaKnown RBP20.57■□□□□ 0.88
PHGDH-232ENST00000641947 MKNK2Q9HBH9 465 aa20.57■□□□□ 0.88
PHGDH-232ENST00000641947 PDCP20941 246 aa20.57■□□□□ 0.88
PHGDH-232ENST00000641947 FOSBP53539 338 aa20.57■□□□□ 0.88
PHGDH-232ENST00000641947 TMTC2Q8N394 836 aa20.57■□□□□ 0.88
PHGDH-232ENST00000641947 IDI2Q9BXS1 227 aa20.57■□□□□ 0.88
PHGDH-232ENST00000641947 SH3BP5LQ7L8J4 393 aa20.56■□□□□ 0.88
PHGDH-232ENST00000641947 FAM184AQ8NB25 1140 aa20.56■□□□□ 0.88
PHGDH-232ENST00000641947 FHDC1Q9C0D6 1143 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-232ENST00000641947 DDX11L8A8MPP1 907 aa20.55■□□□□ 0.88
PHGDH-232ENST00000641947 UBE2Q2LH0YL09 131 aa20.55■□□□□ 0.88
PHGDH-232ENST00000641947 CPLX1O14810 134 aa20.55■□□□□ 0.88
PHGDH-232ENST00000641947 DHX16O60231 1041 aaKnown RBP20.55■□□□□ 0.88
PHGDH-232ENST00000641947 TCP10Q12799 353 aa20.55■□□□□ 0.88
PHGDH-232ENST00000641947 FERMT3Q86UX7 667 aa20.55■□□□□ 0.88
PHGDH-232ENST00000641947 PHKBQ93100 1093 aa20.55■□□□□ 0.88
PHGDH-232ENST00000641947 SHTN1A0MZ66 631 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 SPDYE2BA6NHP3 402 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 SPDYE6P0CI01 402 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 TROAPQ12815 778 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 NUP133Q8WUM0 1156 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 ORC3Q9UBD5 711 aaPredicted RBP20.54■□□□□ 0.88
PHGDH-232ENST00000641947 BAZ2BQ9UIF8 2168 aaKnown RBP20.54■□□□□ 0.88
PHGDH-232ENST00000641947 MYH4Q9Y623 1939 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 DDTLA6NHG4 134 aaPredicted RBP20.54■□□□□ 0.88
PHGDH-232ENST00000641947 TSPY3P0CV98 308 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 TSPY8P0CW00 308 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 RCAN1P53805 252 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 RTN1Q16799 776 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 CIAPIN1Q6FI81 312 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 TTC6Q86TZ1 520 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 AGBL3Q8NEM8 1001 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 JDP2Q8WYK2 163 aa20.54■□□□□ 0.88
PHGDH-232ENST00000641947 SYNE3Q6ZMZ3 975 aa20.53■□□□□ 0.88
PHGDH-232ENST00000641947 ZNF444Q8N0Y2 327 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-232ENST00000641947 CMTR1Q8N1G2 835 aaKnown RBP20.53■□□□□ 0.88
PHGDH-232ENST00000641947 FANCBQ8NB91 859 aa20.53■□□□□ 0.88
PHGDH-232ENST00000641947 CHMP4CQ96CF2 233 aa20.53■□□□□ 0.88
PHGDH-232ENST00000641947 AIFM3Q96NN9 605 aa20.53■□□□□ 0.88
PHGDH-232ENST00000641947 DNAJC18Q9H819 358 aa20.53■□□□□ 0.88
PHGDH-232ENST00000641947 GJB4Q9NTQ9 266 aa20.53■□□□□ 0.88
PHGDH-232ENST00000641947 TCP11L1Q9NUJ3 509 aa20.53■□□□□ 0.88
PHGDH-232ENST00000641947 SHMT1P34896 483 aa20.52■□□□□ 0.88
PHGDH-232ENST00000641947 NT5C2P49902 561 aa20.52■□□□□ 0.88
PHGDH-232ENST00000641947 NBPF11Q86T75 865 aa20.52■□□□□ 0.88
PHGDH-232ENST00000641947 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.52■□□□□ 0.88
PHGDH-232ENST00000641947 SERPINB13Q9UIV8 391 aa20.52■□□□□ 0.88
PHGDH-232ENST00000641947 NPM3O75607 178 aaKnown RBP20.51■□□□□ 0.87
PHGDH-232ENST00000641947 GUCY1B3Q02153 619 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 OTUD7BQ6GQQ9 843 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 FAM173BQ6P4H8 233 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 NEDD1Q8NHV4 660 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 ANKS1AQ92625 1134 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 PLIN4Q96Q06 1357 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 LMBRD1Q9NUN5 540 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 IFNAR1P17181 557 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 RESTQ13127 1097 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 CATIPQ7Z7H3 387 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 ZNF287Q9HBT7 754 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 GDPD2Q9HCC8 539 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 CNPY2Q9Y2B0 182 aa20.51■□□□□ 0.87
PHGDH-232ENST00000641947 CLRN2A0PK11 232 aa20.5■□□□□ 0.87
PHGDH-232ENST00000641947 FAM196BA6NMK8 535 aa20.5■□□□□ 0.87
PHGDH-232ENST00000641947 DDAH1O94760 285 aa20.5■□□□□ 0.87
PHGDH-232ENST00000641947 AKR1B1P15121 316 aa20.5■□□□□ 0.87
PHGDH-232ENST00000641947 DLGAP5Q15398 846 aa20.5■□□□□ 0.87
PHGDH-232ENST00000641947 DGKHQ86XP1 1220 aa20.5■□□□□ 0.87
PHGDH-232ENST00000641947 ZBED3Q96IU2 234 aaPredicted RBP20.5■□□□□ 0.87
PHGDH-232ENST00000641947 EHD4Q9H223 541 aa20.5■□□□□ 0.87
PHGDH-232ENST00000641947 HDAC9Q9UKV0 1011 aa20.5■□□□□ 0.87
PHGDH-232ENST00000641947 COL2A1P02458 1487 aaPredicted RBP20.5■□□□□ 0.87
PHGDH-232ENST00000641947 ATRNL1Q5VV63 1379 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 H3BQV1 296 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 FZD9O00144 591 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 CDKL5O76039 1030 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 PLEKHA8P1O95397 391 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 PDIA4P13667 645 aaKnown RBP20.49■□□□□ 0.87
PHGDH-232ENST00000641947 GUCY1A2P33402 732 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 DNM1Q05193 864 aaKnown RBP20.49■□□□□ 0.87
PHGDH-232ENST00000641947 FUT2Q10981 343 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 IFFO2Q5TF58 517 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 OGFOD1Q8N543 542 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 SLC26A6Q9BXS9 759 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 ZNF70Q9UC06 446 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-232ENST00000641947 CNTNAP1P78357 1384 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 ZNF541Q9H0D2 1346 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 STK36Q9NRP7 1315 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 TRAK2O60296 914 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 FMNL1O95466 1100 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-232ENST00000641947 HLA-DOAP06340 250 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 SPDYE2Q495Y8 402 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms