RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PRDX5P30044 214 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 ADD2P35612 726 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 GRIK5Q16478 980 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 SLC9C2Q5TAH2 1124 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 CWC27Q6UX04 472 aaKnown RBP11.28□□□□□ -0.6
PHGDH-228ENST00000641847 TICAM2Q86XR7 235 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 DZIP1Q86YF9 867 aaKnown RBP11.28□□□□□ -0.6
PHGDH-228ENST00000641847 C7orf61Q8IZ16 206 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 MAGEB6Q8N7X4 407 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 PXYLP1Q8TE99 480 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 FAM227BQ96M60 508 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 UBE2OQ9C0C9 1292 aaKnown RBP11.28□□□□□ -0.6
PHGDH-228ENST00000641847 PRDM6Q9NQX0 595 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 RPTORQ8N122 1335 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 ADGRA2Q96PE1 1338 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 ZNF532Q9HCE3 1301 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 TCRBV5S4A2TA0A5A2 114 aa11.27□□□□□ -0.61
PHGDH-228ENST00000641847 CTGFP29279 349 aa11.27□□□□□ -0.61
PHGDH-228ENST00000641847 CRKP46108 304 aa11.27□□□□□ -0.61
PHGDH-228ENST00000641847 MECOMQ03112 1051 aa11.27□□□□□ -0.61
PHGDH-228ENST00000641847 SLFNL1Q499Z3 407 aa11.27□□□□□ -0.61
PHGDH-228ENST00000641847 ANKLE1Q8NAG6 615 aa11.27□□□□□ -0.61
PHGDH-228ENST00000641847 APPBP2Q92624 585 aa11.27□□□□□ -0.61
PHGDH-228ENST00000641847 ESYT1Q9BSJ8 1104 aa11.27□□□□□ -0.61
PHGDH-228ENST00000641847 ZNF341Q9BYN7 854 aa11.27□□□□□ -0.61
PHGDH-228ENST00000641847 ZMYND8Q9ULU4 1186 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-228ENST00000641847 RAD50Q92878 1312 aa11.27□□□□□ -0.61
PHGDH-228ENST00000641847 TNPO2O14787 897 aaKnown RBP11.26□□□□□ -0.61
PHGDH-228ENST00000641847 IGSF3O75054 1194 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 CYP7A1P22680 504 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 FLT3LGP49771 235 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 UBE3CQ15386 1083 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 ZMYM1Q5SVZ6 1142 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 NAA16Q6N069 864 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-228ENST00000641847 FAM83AQ86UY5 434 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 ZNF384Q8TF68 577 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 RUFY2Q8WXA3 655 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 NSUN4Q96CB9 384 aaKnown RBP11.26□□□□□ -0.61
PHGDH-228ENST00000641847 NBPF3Q9H094 633 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 IL25Q9H293 177 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
PHGDH-228ENST00000641847 PAK6Q9NQU5 681 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-228ENST00000641847 TAOK2Q9UL54 1235 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 MAST3O60307 1309 aa11.26□□□□□ -0.61
PHGDH-228ENST00000641847 MYH2Q9UKX2 1941 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 MUC3AQ02505 3323 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 M0R2C6 588 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 ELNP15502 786 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 MAGEA10P43363 369 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-228ENST00000641847 GSTO1P78417 241 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 IRF5Q13568 498 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 DIXDC1Q155Q3 683 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 OSBP2Q969R2 916 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 TEKT1Q969V4 418 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 COA7Q96BR5 231 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 SEC62Q99442 399 aaKnown RBP11.25□□□□□ -0.61
PHGDH-228ENST00000641847 BACH2Q9BYV9 841 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 CRISPLD2Q9H0B8 497 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 HELLSQ9NRZ9 838 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 MROH7-TTC4A0A0A0MT08 1334 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 ECM29Q5VYK3 1845 aa11.25□□□□□ -0.61
PHGDH-228ENST00000641847 DNAH12Q6ZR08 3092 aa11.24□□□□□ -0.61
PHGDH-228ENST00000641847 SGSM2O43147 1006 aa11.24□□□□□ -0.61
PHGDH-228ENST00000641847 BCRP11274 1271 aa11.24□□□□□ -0.61
PHGDH-228ENST00000641847 MFAP1P55081 439 aaKnown RBP11.24□□□□□ -0.61
PHGDH-228ENST00000641847 HDLBPQ00341 1268 aaKnown RBP11.24□□□□□ -0.61
PHGDH-228ENST00000641847 MCMDC2Q4G0Z9 681 aa11.24□□□□□ -0.61
PHGDH-228ENST00000641847 FKBP1CQ5VVH2 108 aa11.24□□□□□ -0.61
PHGDH-228ENST00000641847 FAM109BQ6ICB4 259 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-228ENST00000641847 TMED8Q6PL24 325 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-228ENST00000641847 CCDC129Q6ZRS4 1044 aa11.24□□□□□ -0.61
PHGDH-228ENST00000641847 FASTKD5Q7L8L6 764 aaKnown RBP11.24□□□□□ -0.61
PHGDH-228ENST00000641847 ADGRA1Q86SQ6 560 aa11.24□□□□□ -0.61
PHGDH-228ENST00000641847 ZNF589Q86UQ0 364 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-228ENST00000641847 MIGA1Q8NAN2 632 aa11.24□□□□□ -0.61
PHGDH-228ENST00000641847 SYMPKQ92797 1274 aaKnown RBP11.24□□□□□ -0.61
PHGDH-228ENST00000641847 PUS7LQ9H0K6 701 aaKnown RBP11.24□□□□□ -0.61
PHGDH-228ENST00000641847 GABRQQ9UN88 632 aa11.24□□□□□ -0.61
PHGDH-228ENST00000641847 CCDC171Q6TFL3 1326 aa11.24□□□□□ -0.61
PHGDH-228ENST00000641847 OTOFQ9HC10 1997 aa11.23□□□□□ -0.61
PHGDH-228ENST00000641847 GPAA1O43292 621 aa11.23□□□□□ -0.61
PHGDH-228ENST00000641847 EIF5BO60841 1220 aaKnown RBP11.23□□□□□ -0.61
PHGDH-228ENST00000641847 MBD4O95243 580 aa11.23□□□□□ -0.61
PHGDH-228ENST00000641847 SEC24BO95487 1268 aa11.23□□□□□ -0.61
PHGDH-228ENST00000641847 SYN1P17600 705 aa11.23□□□□□ -0.61
PHGDH-228ENST00000641847 SLF2Q8IX21 1173 aa11.23□□□□□ -0.61
PHGDH-228ENST00000641847 SMCR8Q8TEV9 937 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-228ENST00000641847 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.23□□□□□ -0.61
PHGDH-228ENST00000641847 C11orf49Q9H6J7 331 aa11.23□□□□□ -0.61
PHGDH-228ENST00000641847 ANO2Q9NQ90 1003 aa11.23□□□□□ -0.61
PHGDH-228ENST00000641847 KCNH4Q9UQ05 1017 aa11.23□□□□□ -0.61
PHGDH-228ENST00000641847 GAKO14976 1311 aa11.23□□□□□ -0.61
PHGDH-228ENST00000641847 MAGEB6P1A0A0J9YX57 407 aa11.22□□□□□ -0.61
PHGDH-228ENST00000641847 CXCL11O14625 94 aa11.22□□□□□ -0.61
PHGDH-228ENST00000641847 REC8O95072 547 aa11.22□□□□□ -0.61
PHGDH-228ENST00000641847 LDHCP07864 332 aa11.22□□□□□ -0.61
PHGDH-228ENST00000641847 CYP2C8P10632 490 aa11.22□□□□□ -0.61
PHGDH-228ENST00000641847 CACNB3P54284 484 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms