RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PCP11498 1178 aaKnown RBP15.4■□□□□ 0.06
PHGDH-221ENST00000641573 EVCP57679 992 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 NUCB2P80303 420 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 RAB3GAP1Q15042 981 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 PKN2Q16513 984 aaKnown RBP15.4■□□□□ 0.06
PHGDH-221ENST00000641573 C12orf60Q5U649 245 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 AMOTL1Q8IY63 956 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-221ENST00000641573 ESR2Q92731 530 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 GTF3C6Q969F1 213 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 ZNF274Q96GC6 653 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-221ENST00000641573 TMEM87BQ96K49 555 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 USP40Q9NVE5 1235 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 ZSWIM5Q9P217 1185 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 HDAC9Q9UKV0 1011 aa15.4■□□□□ 0.06
PHGDH-221ENST00000641573 BAZ2AQ9UIF9 1905 aaKnown RBP15.39■□□□□ 0.05
PHGDH-221ENST00000641573 SHTN1A0MZ66 631 aa15.39■□□□□ 0.05
PHGDH-221ENST00000641573 POLR3DP05423 398 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-221ENST00000641573 PDIA3P30101 505 aaKnown RBP15.39■□□□□ 0.05
PHGDH-221ENST00000641573 EVX2Q03828 476 aa15.39■□□□□ 0.05
PHGDH-221ENST00000641573 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-221ENST00000641573 TMEM67Q5HYA8 995 aa15.39■□□□□ 0.05
PHGDH-221ENST00000641573 APOBEC3HQ6NTF7 200 aaKnown RBP15.39■□□□□ 0.05
PHGDH-221ENST00000641573 RSBN1LQ6PCB5 846 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-221ENST00000641573 DLK2Q6UY11 383 aa15.39■□□□□ 0.05
PHGDH-221ENST00000641573 SAMD7Q7Z3H4 446 aa15.39■□□□□ 0.05
PHGDH-221ENST00000641573 ZDHHC15Q96MV8 337 aa15.39■□□□□ 0.05
PHGDH-221ENST00000641573 SAP30BPQ9UHR5 308 aaKnown RBP15.39■□□□□ 0.05
PHGDH-221ENST00000641573 BRPF3Q9ULD4 1205 aa15.39■□□□□ 0.05
PHGDH-221ENST00000641573 NAP1L2Q9ULW6 460 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-221ENST00000641573 ANGEL1Q9UNK9 670 aaKnown RBP15.39■□□□□ 0.05
PHGDH-221ENST00000641573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.39■□□□□ 0.05
PHGDH-221ENST00000641573 FLT1P17948 1338 aa15.39■□□□□ 0.05
PHGDH-221ENST00000641573 MYO3BQ8WXR4 1341 aa15.39■□□□□ 0.05
PHGDH-221ENST00000641573 KLF18A0A0U1RQI7 1052 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 PSMD14O00487 310 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 IFIT3O14879 490 aaKnown RBP15.38■□□□□ 0.05
PHGDH-221ENST00000641573 ORC4O43929 436 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 SLC10A3P09131 477 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 VIL1P09327 827 aaKnown RBP15.38■□□□□ 0.05
PHGDH-221ENST00000641573 PDE4BQ07343 736 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 SCRN1Q12765 414 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 SLC4A8Q2Y0W8 1093 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 CDC42EP5Q6NZY7 148 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 IGDCC4Q8TDY8 1250 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 DPF2Q92785 391 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 CSRNP1Q96S65 589 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 MTA3Q9BTC8 594 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 SERPINA10Q9UK55 444 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 LAMB1P07942 1786 aa15.38■□□□□ 0.05
PHGDH-221ENST00000641573 NAV1Q8NEY1 1877 aa15.37■□□□□ 0.05
PHGDH-221ENST00000641573 ADM5C9JUS6 153 aa15.37■□□□□ 0.05
PHGDH-221ENST00000641573 PRDM1O75626 825 aa15.37■□□□□ 0.05
PHGDH-221ENST00000641573 GJB2P29033 226 aa15.37■□□□□ 0.05
PHGDH-221ENST00000641573 RBM5P52756 815 aaKnown RBP eCLIP15.37■□□□□ 0.05
PHGDH-221ENST00000641573 SART3Q15020 963 aaKnown RBP15.37■□□□□ 0.05
PHGDH-221ENST00000641573 SULF1Q8IWU6 871 aa15.37■□□□□ 0.05
PHGDH-221ENST00000641573 CHMP4CQ96CF2 233 aa15.37■□□□□ 0.05
PHGDH-221ENST00000641573 LY9Q9HBG7 655 aa15.37■□□□□ 0.05
PHGDH-221ENST00000641573 ZBTB12Q9Y330 459 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-221ENST00000641573 ROBO3Q96MS0 1386 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 GOLGA8BA8MQT2 603 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 RANBP6O60518 1105 aaKnown RBP15.36■□□□□ 0.05
PHGDH-221ENST00000641573 WDHD1O75717 1129 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-221ENST00000641573 LIFRP42702 1097 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 CCT2P78371 535 aaKnown RBP15.36■□□□□ 0.05
PHGDH-221ENST00000641573 PICALMQ13492 652 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 PKP1Q13835 747 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 NFKBIBQ15653 356 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 RBM26Q5T8P6 1007 aaKnown RBP15.36■□□□□ 0.05
PHGDH-221ENST00000641573 NFXL1Q6ZNB6 911 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 TNPO1Q92973 898 aaKnown RBP15.36■□□□□ 0.05
PHGDH-221ENST00000641573 DYNLL2Q96FJ2 89 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 ZKSCAN3Q9BRR0 538 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 LLPHQ9BRT6 129 aaKnown RBP15.36■□□□□ 0.05
PHGDH-221ENST00000641573 UBAC1Q9BSL1 405 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 SENP2Q9HC62 589 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 PCDHAC2Q9Y5I4 1007 aa15.36■□□□□ 0.05
PHGDH-221ENST00000641573 ERICH2A1L162 156 aa15.35■□□□□ 0.05
PHGDH-221ENST00000641573 DTNBO60941 627 aa15.35■□□□□ 0.05
PHGDH-221ENST00000641573 RPS12P25398 132 aaKnown RBP15.35■□□□□ 0.05
PHGDH-221ENST00000641573 PLCD1P51178 756 aa15.35■□□□□ 0.05
PHGDH-221ENST00000641573 WTAPQ15007 396 aa15.35■□□□□ 0.05
PHGDH-221ENST00000641573 CFAP100Q494V2 611 aa15.35■□□□□ 0.05
PHGDH-221ENST00000641573 SGMS1Q86VZ5 419 aa15.35■□□□□ 0.05
PHGDH-221ENST00000641573 GMLQ99445 158 aa15.35■□□□□ 0.05
PHGDH-221ENST00000641573 DDX4Q9NQI0 724 aaKnown RBP15.35■□□□□ 0.05
PHGDH-221ENST00000641573 ZDHHC9Q9Y397 364 aa15.35■□□□□ 0.05
PHGDH-221ENST00000641573 CDK5RAP2Q96SN8 1893 aa15.35■□□□□ 0.05
PHGDH-221ENST00000641573 DDX60LQ5H9U9 1706 aaKnown RBP15.34■□□□□ 0.05
PHGDH-221ENST00000641573 CCDC69A6NI79 296 aa15.34■□□□□ 0.05
PHGDH-221ENST00000641573 JAK2O60674 1132 aa15.34■□□□□ 0.05
PHGDH-221ENST00000641573 BRD1O95696 1058 aa15.34■□□□□ 0.05
PHGDH-221ENST00000641573 NT5C2P49902 561 aa15.34■□□□□ 0.05
PHGDH-221ENST00000641573 HABP4Q5JVS0 413 aaKnown RBP15.34■□□□□ 0.05
PHGDH-221ENST00000641573 RAB11FIP4Q86YS3 637 aa15.34■□□□□ 0.05
PHGDH-221ENST00000641573 ZSCAN10Q96SZ4 725 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-221ENST00000641573 NCOA5Q9HCD5 579 aaKnown RBP15.34■□□□□ 0.05
PHGDH-221ENST00000641573 ZBTB43O43298 467 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 CTDNEP1O95476 244 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms