RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 NCOA5Q9HCD5 579 aaKnown RBP11.31□□□□□ -0.6
PHGDH-215ENST00000641371 FER1L6Q2WGJ9 1857 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 LTBP3Q9NS15 1303 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 MYH6P13533 1939 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 SCN9AQ15858 1988 aa11.3□□□□□ -0.6
PHGDH-215ENST00000641371 LETM1O95202 739 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-215ENST00000641371 KCNA3P22001 575 aa11.3□□□□□ -0.6
PHGDH-215ENST00000641371 RESTQ13127 1097 aa11.3□□□□□ -0.6
PHGDH-215ENST00000641371 L1TD1Q5T7N2 865 aaKnown RBP11.3□□□□□ -0.6
PHGDH-215ENST00000641371 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
PHGDH-215ENST00000641371 AGBL3Q8NEM8 1001 aa11.3□□□□□ -0.6
PHGDH-215ENST00000641371 CCDC17Q96LX7 622 aa11.3□□□□□ -0.6
PHGDH-215ENST00000641371 OSBPL5Q9H0X9 879 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-215ENST00000641371 KAT14Q9H8E8 782 aa11.3□□□□□ -0.6
PHGDH-215ENST00000641371 GPHNQ9NQX3 736 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-215ENST00000641371 USP40Q9NVE5 1235 aa11.3□□□□□ -0.6
PHGDH-215ENST00000641371 TMOD2Q9NZR1 351 aa11.3□□□□□ -0.6
PHGDH-215ENST00000641371 ENTPD3O75355 529 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 VIL1P09327 827 aaKnown RBP11.29□□□□□ -0.6
PHGDH-215ENST00000641371 CDK8P49336 464 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 TFAP4Q01664 338 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 NTRK3Q16288 839 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 FOXD4L5Q5VV16 416 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-215ENST00000641371 APOBEC3HQ6NTF7 200 aaKnown RBP11.29□□□□□ -0.6
PHGDH-215ENST00000641371 RSBN1LQ6PCB5 846 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-215ENST00000641371 OLFM4Q6UX06 510 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 SLC51AQ86UW1 340 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 OGFOD1Q8N543 542 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 FOXD4L4Q8WXT5 416 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-215ENST00000641371 ALG1Q9BT22 464 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 TAOK3Q9H2K8 898 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 ZNRF3Q9ULT6 936 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 TACC3Q9Y6A5 838 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 ARFGEF1Q9Y6D6 1849 aa11.29□□□□□ -0.6
PHGDH-215ENST00000641371 CYP2D7A0A087X1C5 515 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 GOLGA6L4A6NEF3 574 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 WDHD1O75717 1129 aaPredicted RBP11.28□□□□□ -0.6
PHGDH-215ENST00000641371 ZBTB7AO95365 584 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 FDPSP14324 419 aaKnown RBP11.28□□□□□ -0.6
PHGDH-215ENST00000641371 SMARCA1P28370 1054 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 ADD1P35611 737 aaKnown RBP11.28□□□□□ -0.6
PHGDH-215ENST00000641371 GABPAQ06546 454 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 TROAPQ12815 778 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 TNIP1Q15025 636 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 FKBP1CQ5VVH2 108 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 CDC42EP5Q6NZY7 148 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 CRACR2BQ8N4Y2 399 aaPredicted RBP11.28□□□□□ -0.6
PHGDH-215ENST00000641371 MTMR14Q8NCE2 650 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 NUP133Q8WUM0 1156 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 JDP2Q8WYK2 163 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 PDGFDQ9GZP0 370 aaPredicted RBP11.28□□□□□ -0.6
PHGDH-215ENST00000641371 BRMS1Q9HCU9 246 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 SERPINB13Q9UIV8 391 aa11.28□□□□□ -0.6
PHGDH-215ENST00000641371 F8W031 263 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-215ENST00000641371 PRPF3O43395 683 aaKnown RBP11.27□□□□□ -0.61
PHGDH-215ENST00000641371 PRDM1O75626 825 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 CYP2D6P10635 497 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 TOP1P11387 765 aaKnown RBP11.27□□□□□ -0.61
PHGDH-215ENST00000641371 RASA1P20936 1047 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 RPS12P25398 132 aaKnown RBP11.27□□□□□ -0.61
PHGDH-215ENST00000641371 CDC27P30260 824 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 NOVP48745 357 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 RBM5P52756 815 aaKnown RBP eCLIP11.27□□□□□ -0.61
PHGDH-215ENST00000641371 DNM1Q05193 864 aaKnown RBP11.27□□□□□ -0.61
PHGDH-215ENST00000641371 GNL2Q13823 731 aaKnown RBP11.27□□□□□ -0.61
PHGDH-215ENST00000641371 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 KIAA0825Q8IV33 1275 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 FOXP4Q8IVH2 680 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-215ENST00000641371 SPATA32Q96LK8 384 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 SLC26A6Q9BXS9 759 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 INCENPQ9NQS7 918 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 FAM217BQ9NTX9 383 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-215ENST00000641371 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-215ENST00000641371 PI4KBQ9UBF8 816 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 ATRNL1Q5VV63 1379 aa11.27□□□□□ -0.61
PHGDH-215ENST00000641371 FIBPO43427 364 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 MYO1BO43795 1136 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 YEATS4O95619 227 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 PLCD1P51178 756 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 ZNF445P59923 1031 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 R3HDM1Q15032 1099 aaKnown RBP11.26□□□□□ -0.61
PHGDH-215ENST00000641371 TMTC3Q6ZXV5 915 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 STK11IPQ8N1F8 1099 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 JMYQ8N9B5 988 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 KCNG4Q8TDN1 519 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 SGIP1Q9BQI5 828 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 FOXP1Q9H334 677 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-215ENST00000641371 SAP30BPQ9UHR5 308 aaKnown RBP11.26□□□□□ -0.61
PHGDH-215ENST00000641371 SYNPO2Q9UMS6 1093 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 CNPY2Q9Y2B0 182 aa11.26□□□□□ -0.61
PHGDH-215ENST00000641371 ATF5Q9Y2D1 282 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-215ENST00000641371 YDJCA8MPS7 323 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 SCNN1DP51172 638 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 PICALMQ13492 652 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 GRM4Q14833 912 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms