RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PABPC4Q13310 644 aaKnown RBP eCLIP20.4■□□□□ 0.86
PHGDH-213ENST00000641272 MAGEB6Q8N7X4 407 aa20.4■□□□□ 0.86
PHGDH-213ENST00000641272 DPF3Q92784 378 aa20.4■□□□□ 0.86
PHGDH-213ENST00000641272 TBC1D2Q9BYX2 928 aa20.4■□□□□ 0.86
PHGDH-213ENST00000641272 IL1RAPL2Q9NP60 686 aa20.4■□□□□ 0.86
PHGDH-213ENST00000641272 ZBTB21Q9ULJ3 1066 aa20.4■□□□□ 0.86
PHGDH-213ENST00000641272 HLA-DOAP06340 250 aa20.39■□□□□ 0.85
PHGDH-213ENST00000641272 ASNSP08243 561 aa20.39■□□□□ 0.85
PHGDH-213ENST00000641272 IRX3P78415 501 aaPredicted RBP20.39■□□□□ 0.85
PHGDH-213ENST00000641272 SH3D19Q5HYK7 790 aa20.39■□□□□ 0.85
PHGDH-213ENST00000641272 ALPK3Q96L96 1907 aa20.38■□□□□ 0.85
PHGDH-213ENST00000641272 USP5P45974 858 aa20.38■□□□□ 0.85
PHGDH-213ENST00000641272 IRF5Q13568 498 aa20.38■□□□□ 0.85
PHGDH-213ENST00000641272 DEFB118Q96PH6 123 aa20.38■□□□□ 0.85
PHGDH-213ENST00000641272 TMOD4Q9NZQ9 345 aa20.38■□□□□ 0.85
PHGDH-213ENST00000641272 GCLCP48506 637 aaPredicted RBP20.37■□□□□ 0.85
PHGDH-213ENST00000641272 BACE1P56817 501 aa20.37■□□□□ 0.85
PHGDH-213ENST00000641272 ZYXQ15942 572 aaKnown RBP20.37■□□□□ 0.85
PHGDH-213ENST00000641272 CHRDL2Q6WN34 429 aa20.37■□□□□ 0.85
PHGDH-213ENST00000641272 UBE2Q1Q7Z7E8 422 aa20.37■□□□□ 0.85
PHGDH-213ENST00000641272 PXYLP1Q8TE99 480 aa20.37■□□□□ 0.85
PHGDH-213ENST00000641272 WDR18Q9BV38 432 aa20.37■□□□□ 0.85
PHGDH-213ENST00000641272 PCDH10Q9P2E7 1040 aa20.37■□□□□ 0.85
PHGDH-213ENST00000641272 GH2P01242 217 aa20.36■□□□□ 0.85
PHGDH-213ENST00000641272 FXR1P51114 621 aaKnown RBP eCLIP20.36■□□□□ 0.856e-7■■■■□ 19.4
PHGDH-213ENST00000641272 TRIM32Q13049 653 aa20.36■□□□□ 0.85
PHGDH-213ENST00000641272 ERC1Q8IUD2 1116 aa20.36■□□□□ 0.85
PHGDH-213ENST00000641272 TRIOBPQ9H2D6 2365 aa20.35■□□□□ 0.85
PHGDH-213ENST00000641272 SGPL1O95470 568 aa20.35■□□□□ 0.85
PHGDH-213ENST00000641272 METTL16Q86W50 562 aaKnown RBP20.35■□□□□ 0.85
PHGDH-213ENST00000641272 FOXP4Q8IVH2 680 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-213ENST00000641272 HTATIP2Q9BUP3 242 aa20.35■□□□□ 0.85
PHGDH-213ENST00000641272 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.35■□□□□ 0.85
PHGDH-213ENST00000641272 TXNRD2Q9NNW7 524 aa20.35■□□□□ 0.85
PHGDH-213ENST00000641272 USP17L10C9JJH3 530 aa20.34■□□□□ 0.85
PHGDH-213ENST00000641272 TFRCP02786 760 aaKnown RBP20.34■□□□□ 0.85
PHGDH-213ENST00000641272 HERVK_113P62684 666 aa20.34■□□□□ 0.85
PHGDH-213ENST00000641272 RHPN1Q8TCX5 695 aa20.34■□□□□ 0.85
PHGDH-213ENST00000641272 P2RX7Q99572 595 aaKnown RBP20.34■□□□□ 0.85
PHGDH-213ENST00000641272 FEZ1Q99689 392 aa20.34■□□□□ 0.85
PHGDH-213ENST00000641272 PAGR1Q9BTK6 254 aa20.34■□□□□ 0.85
PHGDH-213ENST00000641272 HMGCRP04035 888 aa20.33■□□□□ 0.85
PHGDH-213ENST00000641272 MAP3K12Q12852 859 aa20.33■□□□□ 0.85
PHGDH-213ENST00000641272 DIS3LQ8TF46 1054 aaKnown RBP20.33■□□□□ 0.85
PHGDH-213ENST00000641272 DNAJC2Q99543 621 aaKnown RBP20.33■□□□□ 0.85
PHGDH-213ENST00000641272 PAK6Q9NQU5 681 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-213ENST00000641272 MORF4L1Q9UBU8 362 aa20.33■□□□□ 0.85
PHGDH-213ENST00000641272 COG6Q9Y2V7 657 aa20.33■□□□□ 0.85
PHGDH-213ENST00000641272 MYH8P13535 1937 aa20.32■□□□□ 0.84
PHGDH-213ENST00000641272 CYP2B6P20813 491 aa20.32■□□□□ 0.84
PHGDH-213ENST00000641272 EVX2Q03828 476 aa20.32■□□□□ 0.84
PHGDH-213ENST00000641272 TRIB2Q92519 343 aa20.32■□□□□ 0.84
PHGDH-213ENST00000641272 EMILIN3Q9NT22 766 aa20.32■□□□□ 0.84
PHGDH-213ENST00000641272 C19orf81C9J6K1 198 aa20.31■□□□□ 0.84
PHGDH-213ENST00000641272 RAB3GAP1Q15042 981 aa20.31■□□□□ 0.84
PHGDH-213ENST00000641272 EDC3Q96F86 508 aaKnown RBP20.31■□□□□ 0.84
PHGDH-213ENST00000641272 RIOK1Q9BRS2 568 aaKnown RBP20.31■□□□□ 0.84
PHGDH-213ENST00000641272 SERPINB13Q9UIV8 391 aa20.31■□□□□ 0.84
PHGDH-213ENST00000641272 GJD2Q9UKL4 321 aa20.31■□□□□ 0.84
PHGDH-213ENST00000641272 MAGEB6P1A0A0J9YX57 407 aa20.3■□□□□ 0.84
PHGDH-213ENST00000641272 GOLIM4O00461 696 aa20.3■□□□□ 0.84
PHGDH-213ENST00000641272 IGSF3O75054 1194 aa20.3■□□□□ 0.84
PHGDH-213ENST00000641272 PDE6AP16499 860 aa20.3■□□□□ 0.84
PHGDH-213ENST00000641272 HOXA7P31268 230 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-213ENST00000641272 USP17L2Q6R6M4 530 aa20.3■□□□□ 0.84
PHGDH-213ENST00000641272 PORCNQ9H237 461 aa20.3■□□□□ 0.84
PHGDH-213ENST00000641272 GINM1Q9NU53 330 aa20.3■□□□□ 0.84
PHGDH-213ENST00000641272 PLCD1P51178 756 aa20.29■□□□□ 0.84
PHGDH-213ENST00000641272 HSP90AB4PQ58FF6 505 aa20.29■□□□□ 0.84
PHGDH-213ENST00000641272 GPRC5AQ8NFJ5 357 aa20.29■□□□□ 0.84
PHGDH-213ENST00000641272 ACER1Q8TDN7 264 aa20.29■□□□□ 0.84
PHGDH-213ENST00000641272 PAWRQ96IZ0 340 aaKnown RBP20.29■□□□□ 0.84
PHGDH-213ENST00000641272 EHD4Q9H223 541 aa20.29■□□□□ 0.84
PHGDH-213ENST00000641272 RBM27Q9P2N5 1060 aaKnown RBP20.29■□□□□ 0.84
PHGDH-213ENST00000641272 RBPJLQ9UBG7 517 aa20.29■□□□□ 0.84
PHGDH-213ENST00000641272 FRMPD3Q5JV73 1810 aa20.29■□□□□ 0.84
PHGDH-213ENST00000641272 MYH7P12883 1935 aa20.29■□□□□ 0.84
PHGDH-213ENST00000641272 BAZ2AQ9UIF9 1905 aaKnown RBP20.29■□□□□ 0.84
PHGDH-213ENST00000641272 SHMT1P34896 483 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 ERVK-9P63128 1117 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 ERVK-24P63145 666 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 ABCB5Q2M3G0 1257 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 Q3C1V9 767 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 CERKLQ49MI3 558 aaPredicted RBP20.28■□□□□ 0.84
PHGDH-213ENST00000641272 SLC9C2Q5TAH2 1124 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 TATDN1Q6P1N9 297 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 POTEEQ6S8J3 1075 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 TTC6Q86TZ1 520 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 CERS3Q8IU89 383 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 SIRT2Q8IXJ6 389 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 CLASRPQ8N2M8 674 aaKnown RBP20.28■□□□□ 0.84
PHGDH-213ENST00000641272 CRISPLD2Q9H0B8 497 aa20.28■□□□□ 0.84
PHGDH-213ENST00000641272 ZNF532Q9HCE3 1301 aa20.27■□□□□ 0.84
PHGDH-213ENST00000641272 POLR3DP05423 398 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-213ENST00000641272 IFIT2P09913 472 aaKnown RBP20.27■□□□□ 0.84
PHGDH-213ENST00000641272 PDE3AQ14432 1141 aa20.27■□□□□ 0.84
PHGDH-213ENST00000641272 SLFNL1Q499Z3 407 aa20.27■□□□□ 0.84
PHGDH-213ENST00000641272 CCAR1Q8IX12 1150 aaKnown RBP20.27■□□□□ 0.84
PHGDH-213ENST00000641272 LCORLQ8N3X6 602 aa20.27■□□□□ 0.84
PHGDH-213ENST00000641272 SDR42E1Q8WUS8 393 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms