RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 C12orf60Q5U649 245 aa23.61■■□□□ 1.37
SP3-208ENST00000640958 RTFDC1Q9BY42 306 aaPredicted RBP23.61■■□□□ 1.37
SP3-208ENST00000640958 KCNJ14Q9UNX9 436 aa23.61■■□□□ 1.37
SP3-208ENST00000640958 BAG3O95817 575 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 LDHCP07864 332 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 CALM1P0DP23 149 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 CALM2P0DP24 149 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 CALM3P0DP25 149 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 USP5P45974 858 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 FAM47AQ5JRC9 791 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 TMC4Q7Z404 712 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 NOSTRINQ8IVI9 506 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 DIS3L2Q8IYB7 885 aaKnown RBP23.6■■□□□ 1.37
SP3-208ENST00000640958 RBM28Q9NW13 759 aaKnown RBP23.6■■□□□ 1.37
SP3-208ENST00000640958 NMT2O60551 498 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 WDHD1O75717 1129 aaPredicted RBP23.6■■□□□ 1.37
SP3-208ENST00000640958 LUZP1Q86V48 1076 aa23.6■■□□□ 1.37
SP3-208ENST00000640958 COL23A1Q86Y22 540 aaPredicted RBP23.6■■□□□ 1.37
SP3-208ENST00000640958 BTBD18B2RXH4 712 aa23.59■■□□□ 1.37
SP3-208ENST00000640958 PPEF1O14829 653 aaPredicted RBP23.59■■□□□ 1.37
SP3-208ENST00000640958 PPP6R2O75170 966 aa23.59■■□□□ 1.37
SP3-208ENST00000640958 SAFBQ15424 915 aaKnown RBP eCLIP23.59■■□□□ 1.37
SP3-208ENST00000640958 DNAJC25Q9H1X3 360 aa23.59■■□□□ 1.37
SP3-208ENST00000640958 FOXP1Q9H334 677 aaPredicted RBP23.59■■□□□ 1.37
SP3-208ENST00000640958 PLEKHA8P1O95397 391 aa23.59■■□□□ 1.37
SP3-208ENST00000640958 CMA1P23946 247 aa23.59■■□□□ 1.37
SP3-208ENST00000640958 ZNF772Q68DY9 489 aaPredicted RBP23.59■■□□□ 1.37
SP3-208ENST00000640958 SHISA4Q96DD7 197 aa23.59■■□□□ 1.37
SP3-208ENST00000640958 ZKSCAN5Q9Y2L8 839 aa23.59■■□□□ 1.37
SP3-208ENST00000640958 MARCKSP29966 332 aaPredicted RBP23.58■■□□□ 1.37
SP3-208ENST00000640958 PKN1Q16512 942 aa23.58■■□□□ 1.37
SP3-208ENST00000640958 SP8Q8IXZ3 490 aa23.58■■□□□ 1.37
SP3-208ENST00000640958 NLGN1Q8N2Q7 840 aa23.58■■□□□ 1.37
SP3-208ENST00000640958 NOL10Q9BSC4 688 aaKnown RBP23.58■■□□□ 1.37
SP3-208ENST00000640958 FOCADQ5VW36 1801 aa23.58■■□□□ 1.37
SP3-208ENST00000640958 TNS1Q9HBL0 1735 aaKnown RBP23.58■■□□□ 1.36
SP3-208ENST00000640958 PRPF3O43395 683 aaKnown RBP23.57■■□□□ 1.36
SP3-208ENST00000640958 CAVIN2O95810 425 aa23.57■■□□□ 1.36
SP3-208ENST00000640958 NT5C2P49902 561 aa23.57■■□□□ 1.36
SP3-208ENST00000640958 STX1AQ16623 288 aa23.57■■□□□ 1.36
SP3-208ENST00000640958 TMTC3Q6ZXV5 915 aa23.57■■□□□ 1.36
SP3-208ENST00000640958 MSNP26038 577 aaKnown RBP23.57■■□□□ 1.36
SP3-208ENST00000640958 SLC4A8Q2Y0W8 1093 aa23.57■■□□□ 1.36
SP3-208ENST00000640958 RCSD1Q6JBY9 416 aa23.57■■□□□ 1.36
SP3-208ENST00000640958 JMYQ8N9B5 988 aa23.57■■□□□ 1.36
SP3-208ENST00000640958 TSPY2A6NKD2 308 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 APBA3O96018 575 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 PTMAP06454 111 aaKnown RBP23.56■■□□□ 1.36
SP3-208ENST00000640958 PFKFB1P16118 471 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 BTDP43251 543 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 ZNF165P49910 485 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 FAM205AQ6ZU69 1335 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 CERS3Q8IU89 383 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 TGFBRAP1Q8WUH2 860 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 CNTNAP5Q8WYK1 1306 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 ATP6V0A2Q9Y487 856 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 MYH1P12882 1939 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 GPR75-ASB3A0A0A6YYF3 556 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 C6orf229H3BNL8 230 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 TOB1P50616 345 aaPredicted RBP23.56■■□□□ 1.36
SP3-208ENST00000640958 AKAP17AQ02040 695 aaKnown RBP23.56■■□□□ 1.36
SP3-208ENST00000640958 DYNLL2Q96FJ2 89 aa23.56■■□□□ 1.36
SP3-208ENST00000640958 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.56■■□□□ 1.36
SP3-208ENST00000640958 SRGNP10124 158 aa23.55■■□□□ 1.36
SP3-208ENST00000640958 MFSD14BQ5SR56 506 aa23.55■■□□□ 1.36
SP3-208ENST00000640958 C11orf57Q6ZUT1 292 aaPredicted RBP23.55■■□□□ 1.36
SP3-208ENST00000640958 TBC1D22AQ8WUA7 517 aa23.55■■□□□ 1.36
SP3-208ENST00000640958 QSER1Q2KHR3 1735 aa23.54■■□□□ 1.36
SP3-208ENST00000640958 NR5A1Q13285 461 aa23.54■■□□□ 1.36
SP3-208ENST00000640958 HPSEQ9Y251 543 aa23.54■■□□□ 1.36
SP3-208ENST00000640958 RGPD3A6NKT7 1758 aaPredicted RBP23.54■■□□□ 1.36
SP3-208ENST00000640958 RGPD4Q7Z3J3 1758 aa23.54■■□□□ 1.36
SP3-208ENST00000640958 GAKO14976 1311 aa23.54■■□□□ 1.36
SP3-208ENST00000640958 FAM237AA0A1B0GTK4 181 aa23.54■■□□□ 1.36
SP3-208ENST00000640958 ZNF202O95125 648 aa23.54■■□□□ 1.36
SP3-208ENST00000640958 PLCB2Q00722 1185 aa23.54■■□□□ 1.36
SP3-208ENST00000640958 SHC4Q6S5L8 630 aa23.54■■□□□ 1.36
SP3-208ENST00000640958 CTCFLQ8NI51 663 aaPredicted RBP23.54■■□□□ 1.36
SP3-208ENST00000640958 OXER1Q8TDS5 423 aa23.54■■□□□ 1.36
SP3-208ENST00000640958 FAM163AQ96GL9 167 aaPredicted RBP23.54■■□□□ 1.36
SP3-208ENST00000640958 TFAP4Q01664 338 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 MAPKAPK5Q8IW41 473 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 AMOTL1Q8IY63 956 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 SDF4Q9BRK5 362 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 PHF20Q9BVI0 1012 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 VPS54Q9P1Q0 977 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 BAZ2BQ9UIF8 2168 aaKnown RBP23.53■■□□□ 1.36
SP3-208ENST00000640958 CUTAO60888 179 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 NPR1P16066 1061 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 IQCB1Q15051 598 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 RILPL1Q5EBL4 403 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 SRBD1Q8N5C6 995 aaKnown RBP23.53■■□□□ 1.36
SP3-208ENST00000640958 IL17RBQ9NRM6 502 aa23.53■■□□□ 1.36
SP3-208ENST00000640958 V9GY48 417 aaPredicted RBP23.53■■□□□ 1.36
SP3-208ENST00000640958 hCG_1642624A0A1W2PR95 340 aa23.52■■□□□ 1.36
SP3-208ENST00000640958 XBP1P17861 261 aa23.52■■□□□ 1.36
SP3-208ENST00000640958 RESP18Q5W5W9 173 aa23.52■■□□□ 1.36
SP3-208ENST00000640958 FLAD1Q8NFF5 587 aa23.52■■□□□ 1.36
SP3-208ENST00000640958 ANKS1AQ92625 1134 aa23.52■■□□□ 1.36
SP3-208ENST00000640958 ERCC4Q92889 916 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms