RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 KLHL3Q9UH77 587 aa9.14□□□□□ -0.95
SCARB2-224ENST00000640880 G3BP2Q9UN86 482 aaKnown RBP9.14□□□□□ -0.95
SCARB2-224ENST00000640880 PRXQ9BXM0 1461 aa9.14□□□□□ -0.95
SCARB2-224ENST00000640880 LCE2BO14633 110 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 EIF4EBP3O60516 100 aaPredicted RBP9.13□□□□□ -0.95
SCARB2-224ENST00000640880 PDGFRBP09619 1106 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 CNGA1P29973 690 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 PDE4BQ07343 736 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 CCDC181Q5TID7 509 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 FAM117BQ6P1L5 589 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 KRT26Q7Z3Y9 468 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 FCHSD1Q86WN1 690 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 TRIM47Q96LD4 638 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 NRSN2Q9GZP1 204 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 CNNM2Q9H8M5 875 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 CHPF2Q9P2E5 772 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 PPME1Q9Y570 386 aa9.13□□□□□ -0.95
SCARB2-224ENST00000640880 CLSPNQ9HAW4 1339 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 PRAMEF27A3QJZ7 478 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 NEURL1BA8MQ27 555 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 DCDC2CA8MYV0 355 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 LINC01387J3KSC0 135 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 TNFRSF10CO14798 259 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 ADCY3O60266 1144 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 ZNF862O60290 1169 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 PPFIA3O75145 1194 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 HNRNPUQ00839 825 aaKnown RBP eCLIP9.12□□□□□ -0.95
SCARB2-224ENST00000640880 LRRC47Q8N1G4 583 aaKnown RBP9.12□□□□□ -0.95
SCARB2-224ENST00000640880 ZBTB38Q8NAP3 1195 aaPredicted RBP9.12□□□□□ -0.95
SCARB2-224ENST00000640880 SLC26A8Q96RN1 970 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 EPN3Q9H201 632 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 TYW1Q9NV66 732 aaKnown RBP9.12□□□□□ -0.95
SCARB2-224ENST00000640880 TACC3Q9Y6A5 838 aa9.12□□□□□ -0.95
SCARB2-224ENST00000640880 GOLGA3Q08378 1498 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 ELOA3CA0A087WX78 387 aaPredicted RBP9.11□□□□□ -0.95
SCARB2-224ENST00000640880 IQCA1LA6NCM1 817 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 ELOA3DA6NLF2 546 aaPredicted RBP9.11□□□□□ -0.95
SCARB2-224ENST00000640880 CTSBP07858 339 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 LIG1P18858 919 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 SLC7A5Q01650 507 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 LONRF2Q1L5Z9 754 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 ELOA3BQ3SY89 546 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 TMEM201Q5SNT2 666 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 CDCP2Q5VXM1 449 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 CYFIP1Q7L576 1253 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 DHX37Q8IY37 1157 aaKnown RBP9.11□□□□□ -0.95
SCARB2-224ENST00000640880 ELOA3Q8NG57 546 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 KLHL6Q8WZ60 621 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 WNT8BQ93098 351 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 MFSD3Q96ES6 412 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 CARMIL2Q6F5E8 1435 aa9.11□□□□□ -0.95
SCARB2-224ENST00000640880 ARID4BQ4LE39 1312 aaPredicted RBP9.1□□□□□ -0.95
SCARB2-224ENST00000640880 PGRP06401 933 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 GRK4P32298 578 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 BAG6P46379 1132 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 GRIK5Q16478 980 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 GNPTABQ3T906 1256 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 TM4SF20Q53R12 229 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 FERMT3Q86UX7 667 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 C12orf40Q86WS4 652 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 NIM1KQ8IY84 436 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 NINJ1Q92982 152 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 WDR89Q96FK6 387 aaPredicted RBP9.1□□□□□ -0.95
SCARB2-224ENST00000640880 CARD10Q9BWT7 1032 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 JPH1Q9HDC5 661 aaPredicted RBP9.1□□□□□ -0.95
SCARB2-224ENST00000640880 OSGEPQ9NPF4 335 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 CSADQ9Y600 493 aa9.1□□□□□ -0.95
SCARB2-224ENST00000640880 PRG4Q92954 1404 aaPredicted RBP9.1□□□□□ -0.95
SCARB2-224ENST00000640880 CHURC1-FNTBB4DL54 471 aa9.09□□□□□ -0.95
SCARB2-224ENST00000640880 IRS4O14654 1257 aaPredicted RBP9.09□□□□□ -0.95
SCARB2-224ENST00000640880 FSCN2O14926 492 aa9.09□□□□□ -0.95
SCARB2-224ENST00000640880 MYCLP1P12525 358 aaPredicted RBP9.09□□□□□ -0.95
SCARB2-224ENST00000640880 RAG1P15918 1043 aa9.09□□□□□ -0.95
SCARB2-224ENST00000640880 ZC3H12BQ5HYM0 836 aaKnown RBP9.09□□□□□ -0.95
SCARB2-224ENST00000640880 CHAC2Q8WUX2 184 aa9.09□□□□□ -0.95
SCARB2-224ENST00000640880 USP26Q9BXU7 913 aa9.09□□□□□ -0.95
SCARB2-224ENST00000640880 HOMER2Q9NSB8 354 aa9.09□□□□□ -0.95
SCARB2-224ENST00000640880 ADAM30Q9UKF2 790 aa9.09□□□□□ -0.95
SCARB2-224ENST00000640880 ALAS2P22557 587 aa9.08□□□□□ -0.96
SCARB2-224ENST00000640880 POLR2BP30876 1174 aaKnown RBP9.08□□□□□ -0.96
SCARB2-224ENST00000640880 ETF1P62495 437 aaKnown RBP9.08□□□□□ -0.96
SCARB2-224ENST00000640880 CBX2Q14781 532 aaPredicted RBP9.08□□□□□ -0.96
SCARB2-224ENST00000640880 KIF4BQ2VIQ3 1234 aa9.08□□□□□ -0.96
SCARB2-224ENST00000640880 HSP90AB2PQ58FF8 381 aa9.08□□□□□ -0.96
SCARB2-224ENST00000640880 THNSL2Q86YJ6 484 aa9.08□□□□□ -0.96
SCARB2-224ENST00000640880 JAMLQ86YT9 394 aa9.08□□□□□ -0.96
SCARB2-224ENST00000640880 PRPF38AQ8NAV1 312 aaKnown RBP9.08□□□□□ -0.96
SCARB2-224ENST00000640880 NANOS1Q8WY41 292 aaKnown RBP9.08□□□□□ -0.96
SCARB2-224ENST00000640880 JDP2Q8WYK2 163 aa9.08□□□□□ -0.96
SCARB2-224ENST00000640880 GGA1Q9UJY5 639 aa9.08□□□□□ -0.96
SCARB2-224ENST00000640880 ZNF214Q9UL59 606 aaPredicted RBP9.08□□□□□ -0.96
SCARB2-224ENST00000640880 AGRPO00253 132 aa9.07□□□□□ -0.96
SCARB2-224ENST00000640880 CDKN1CP49918 316 aaPredicted RBP9.07□□□□□ -0.96
SCARB2-224ENST00000640880 EVA1CP58658 441 aa9.07□□□□□ -0.96
SCARB2-224ENST00000640880 PABPC4Q13310 644 aaKnown RBP eCLIP9.07□□□□□ -0.96
SCARB2-224ENST00000640880 GAS6Q14393 721 aa9.07□□□□□ -0.96
SCARB2-224ENST00000640880 ODR4Q5SWX8 454 aa9.07□□□□□ -0.96
SCARB2-224ENST00000640880 ACSF2Q96CM8 615 aaPredicted RBP9.07□□□□□ -0.96
SCARB2-224ENST00000640880 CEP89Q96ST8 783 aa9.07□□□□□ -0.96
SCARB2-224ENST00000640880 IER2Q9BTL4 223 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms