RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 TBC1D12O60347 775 aa14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 ELNP15502 786 aa14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 RRP1BQ14684 758 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 TREML2Q5T2D2 321 aa14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 SPTY2D1Q68D10 685 aaPredicted RBP14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 CHRDL2Q6WN34 429 aa14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 SLF2Q8IX21 1173 aa14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 SLAIN1Q8ND83 568 aa14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 U2AF1L4Q8WU68 220 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 NSUN4Q96CB9 384 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 USP26Q9BXU7 913 aa14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 PRO3102Q9H379 93 aa14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 DBNLQ9UJU6 430 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 AGTPBP1Q9UPW5 1226 aa14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 AKAP2Q9Y2D5 859 aa14.26□□□□□ -0.13
ERGIC3-220ENST00000640748 ADCY3O60266 1144 aa14.25□□□□□ -0.13
ERGIC3-220ENST00000640748 ATP5JP18859 108 aa14.25□□□□□ -0.13
ERGIC3-220ENST00000640748 SPATA5Q8NB90 893 aa14.25□□□□□ -0.13
ERGIC3-220ENST00000640748 DPF3Q92784 378 aa14.25□□□□□ -0.13
ERGIC3-220ENST00000640748 DBNDD2Q9BQY9 259 aa14.25□□□□□ -0.13
ERGIC3-220ENST00000640748 RBM27Q9P2N5 1060 aaKnown RBP14.25□□□□□ -0.13
ERGIC3-220ENST00000640748 BIN2Q9UBW5 565 aaPredicted RBP14.25□□□□□ -0.13
ERGIC3-220ENST00000640748 HIP1O00291 1037 aa14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 INHAP05111 366 aa14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 ARID4AP29374 1257 aaPredicted RBP14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 UBXN2AP68543 259 aa14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 IRF5Q13568 498 aa14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 ANKRD13CQ8N6S4 541 aa14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 PXYLP1Q8TE99 480 aa14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 SMCR8Q8TEV9 937 aaPredicted RBP14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 RUFY2Q8WXA3 655 aa14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 NEUROD6Q96NK8 337 aa14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 BOLA2Q9H3K6 86 aa14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 COL2A1P02458 1487 aaPredicted RBP14.24□□□□□ -0.13
ERGIC3-220ENST00000640748 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
ERGIC3-220ENST00000640748 EPB41L2O43491 1005 aaKnown RBP14.23□□□□□ -0.13
ERGIC3-220ENST00000640748 FARP2O94887 1054 aaPredicted RBP14.23□□□□□ -0.13
ERGIC3-220ENST00000640748 SGPL1O95470 568 aa14.23□□□□□ -0.13
ERGIC3-220ENST00000640748 MCAMP43121 646 aa14.23□□□□□ -0.13
ERGIC3-220ENST00000640748 OSBPL5Q9H0X9 879 aaPredicted RBP14.23□□□□□ -0.13
ERGIC3-220ENST00000640748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.23□□□□□ -0.13
ERGIC3-220ENST00000640748 PAK6Q9NQU5 681 aaPredicted RBP14.23□□□□□ -0.13
ERGIC3-220ENST00000640748 DIAPH3Q9NSV4 1193 aa14.23□□□□□ -0.13
ERGIC3-220ENST00000640748 MCCP23508 829 aa14.22□□□□□ -0.13
ERGIC3-220ENST00000640748 SPP2Q13103 211 aa14.22□□□□□ -0.13
ERGIC3-220ENST00000640748 FAM110CQ1W6H9 321 aa14.22□□□□□ -0.13
ERGIC3-220ENST00000640748 LOC285556D6RIA3 1793 aa14.22□□□□□ -0.13
ERGIC3-220ENST00000640748 DOCK3Q8IZD9 2030 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 CAP2P40123 477 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 GSTO1P78417 241 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 JAG1P78504 1218 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 PROCA1Q8NCQ7 364 aaPredicted RBP14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 ZNF280CQ8ND82 737 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 SH3RF3Q8TEJ3 882 aaPredicted RBP14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 DEFB118Q96PH6 123 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 HAUS7Q99871 368 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 FSD1Q9BTV5 496 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 HTATIP2Q9BUP3 242 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 ANO2Q9NQ90 1003 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 RAI14Q9P0K7 980 aa14.21□□□□□ -0.13
ERGIC3-220ENST00000640748 LAMA3Q16787 3333 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 SIPA1L1O43166 1804 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 SGSM2O43147 1006 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 LDHCP07864 332 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 SLC4A3P48751 1232 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 HMGCS2P54868 508 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 CCDC158Q5M9N0 1113 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 ADGRA1Q86SQ6 560 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 DNAJC18Q9H819 358 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 GJD2Q9UKL4 321 aa14.2□□□□□ -0.14
ERGIC3-220ENST00000640748 RABEP1Q15276 862 aa14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 SHROOM1Q2M3G4 852 aaPredicted RBP14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 SH3D19Q5HYK7 790 aa14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 GORABQ5T7V8 394 aa14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 CWC27Q6UX04 472 aaKnown RBP14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 KIAA1211Q6ZU35 1233 aa14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 TEX11Q8IYF3 940 aa14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 SNX21Q969T3 373 aa14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 COA7Q96BR5 231 aa14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 KIF2CQ99661 725 aa14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 TBC1D2Q9BYX2 928 aa14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 ASCC2Q9H1I8 757 aaPredicted RBP14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 PNMA3Q9UL41 463 aa14.19□□□□□ -0.14
ERGIC3-220ENST00000640748 RAD50Q92878 1312 aa14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 MYH7P12883 1935 aa14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 USP17L5A8MUK1 530 aa14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 PEX10O60683 326 aa14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 TFRCP02786 760 aaKnown RBP14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 UQCRFS1P1P0C7P4 283 aa14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 GCLCP48506 637 aaPredicted RBP14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 TTC39AQ5SRH9 613 aa14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 METTL16Q86W50 562 aaKnown RBP14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 TICAM2Q86XR7 235 aa14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 DIS3LQ8TF46 1054 aaKnown RBP14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 DNAJC2Q99543 621 aaKnown RBP14.18□□□□□ -0.14
ERGIC3-220ENST00000640748 SNRKQ9NRH2 765 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms