RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 RNF34Q969K3 372 aa9.56□□□□□ -0.88
SCARB2-220ENST00000640076 EYA3Q99504 573 aa9.56□□□□□ -0.88
SCARB2-220ENST00000640076 FSD1Q9BTV5 496 aa9.56□□□□□ -0.88
SCARB2-220ENST00000640076 RIMBP2O15034 1052 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 GNL2Q13823 731 aaKnown RBP9.55□□□□□ -0.88
SCARB2-220ENST00000640076 TDRD7Q8NHU6 1098 aaKnown RBP9.55□□□□□ -0.88
SCARB2-220ENST00000640076 GTF3C2Q8WUA4 911 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-220ENST00000640076 ZC3H12CQ9C0D7 883 aaKnown RBP9.55□□□□□ -0.88
SCARB2-220ENST00000640076 CD209Q9NNX6 404 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 DENND2AQ9ULE3 1009 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 PDS5AQ29RF7 1337 aaKnown RBP9.55□□□□□ -0.88
SCARB2-220ENST00000640076 RFX7Q2KHR2 1363 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 ARFGEF1Q9Y6D6 1849 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 MYH7P12883 1935 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 CHD4Q14839 1912 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 FRAT2O75474 233 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-220ENST00000640076 SEC24BO95487 1268 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 IL1R1P14778 569 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 TTF1Q15361 905 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-220ENST00000640076 FER1L6Q2WGJ9 1857 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 ZNF746Q6NUN9 644 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-220ENST00000640076 CASC1Q6TDU7 716 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 SUPT20HQ8NEM7 779 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 DOCK2Q92608 1830 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 COA1Q9GZY4 146 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 ACBD3Q9H3P7 528 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 PIH1D3Q9NQM4 214 aaKnown RBP9.55□□□□□ -0.88
SCARB2-220ENST00000640076 BCS1LQ9Y276 419 aa9.55□□□□□ -0.88
SCARB2-220ENST00000640076 HIP1O00291 1037 aa9.54□□□□□ -0.88
SCARB2-220ENST00000640076 DIAPH3Q9NSV4 1193 aa9.54□□□□□ -0.88
SCARB2-220ENST00000640076 UTRNP46939 3433 aa9.54□□□□□ -0.88
SCARB2-220ENST00000640076 DNAJA1P31689 397 aaKnown RBP9.54□□□□□ -0.88
SCARB2-220ENST00000640076 CLDN10P78369 228 aa9.54□□□□□ -0.88
SCARB2-220ENST00000640076 KIAA2012Q0VF49 1180 aa9.54□□□□□ -0.88
SCARB2-220ENST00000640076 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
SCARB2-220ENST00000640076 ESYT1Q9BSJ8 1104 aa9.54□□□□□ -0.88
SCARB2-220ENST00000640076 SYT17Q9BSW7 474 aa9.54□□□□□ -0.88
SCARB2-220ENST00000640076 DNMT3AQ9Y6K1 912 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-220ENST00000640076 IDH1O75874 414 aaKnown RBP9.53□□□□□ -0.88
SCARB2-220ENST00000640076 CHGBP05060 677 aa9.53□□□□□ -0.88
SCARB2-220ENST00000640076 ZFYP08048 801 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-220ENST00000640076 CHAF1AQ13111 956 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-220ENST00000640076 NMIQ13287 307 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-220ENST00000640076 AOC3Q16853 763 aa9.53□□□□□ -0.88
SCARB2-220ENST00000640076 DOK7Q18PE1 504 aa9.53□□□□□ -0.88
SCARB2-220ENST00000640076 LRRFIP1Q32MZ4 808 aaKnown RBP9.53□□□□□ -0.88
SCARB2-220ENST00000640076 CWC27Q6UX04 472 aaKnown RBP9.53□□□□□ -0.88
SCARB2-220ENST00000640076 GPATCH11Q8N954 259 aa9.53□□□□□ -0.88
SCARB2-220ENST00000640076 ZDHHC16Q969W1 377 aa9.53□□□□□ -0.88
SCARB2-220ENST00000640076 FAM227BQ96M60 508 aa9.53□□□□□ -0.88
SCARB2-220ENST00000640076 IL25Q9H293 177 aa9.53□□□□□ -0.88
SCARB2-220ENST00000640076 FAM205AQ6ZU69 1335 aa9.52□□□□□ -0.88
SCARB2-220ENST00000640076 SALL1Q9NSC2 1324 aa9.52□□□□□ -0.88
SCARB2-220ENST00000640076 A0A0D9SFI3 127 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 NFKBIEO00221 500 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 RNF113AO15541 343 aaKnown RBP9.52□□□□□ -0.89
SCARB2-220ENST00000640076 SGSM2O43147 1006 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 PPIP5K2O43314 1243 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 TNNI2P48788 182 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 KCNH2Q12809 1159 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 JAZF1Q86VZ6 243 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 WDR66Q8TBY9 1149 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 RUFY2Q8WXA3 655 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 FAM161BQ96MY7 647 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.52□□□□□ -0.89
SCARB2-220ENST00000640076 VPS33BQ9H267 617 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 ZNF277Q9NRM2 450 aaPredicted RBP9.52□□□□□ -0.89
SCARB2-220ENST00000640076 ABCF2Q9UG63 623 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 JAG2Q9Y219 1238 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 SCN9AQ15858 1988 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 FMNL1O95466 1100 aaPredicted RBP9.52□□□□□ -0.89
SCARB2-220ENST00000640076 ADD2P35612 726 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 MAP3K12Q12852 859 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 SLFNL1Q499Z3 407 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 ZMYM1Q5SVZ6 1142 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 SLC9C2Q5TAH2 1124 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 ZSCAN25Q6NSZ9 544 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 PODNQ7Z5L7 613 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 TAOK3Q9H2K8 898 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 DBNDD1Q9H9R9 158 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 LRP2BPQ9P2M1 347 aa9.52□□□□□ -0.89
SCARB2-220ENST00000640076 MAGEC2Q9UBF1 373 aaPredicted RBP9.52□□□□□ -0.89
SCARB2-220ENST00000640076 RAD50Q92878 1312 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 LTBP3Q9NS15 1303 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 TCRBV5S4A2TA0A5A2 114 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 ECE2O60344 883 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 DKK1O94907 266 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 PDE6AP16499 860 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 HSD3B2P26439 372 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 GTF2IP78347 998 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 UBE3CQ15386 1083 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 NUDT18Q6ZVK8 323 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 TMC7Q7Z402 723 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 PLPP7Q8NBV4 271 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 PARP2Q9UGN5 583 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 SEPT3Q9UH03 358 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 COL4A5P29400 1685 aa9.51□□□□□ -0.89
SCARB2-220ENST00000640076 CCDC88AQ3V6T2 1871 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 REC8O95072 547 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms