RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 TRPM3Q9HCF6 1732 aaPredicted RBP8.21□□□□□ -1.09
ATM-229ENST00000639953 PRR19A6NJB7 356 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 COBLO75128 1261 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 FAM13AO94988 1023 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 ABL1P00519 1130 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 POLR3DP05423 398 aaPredicted RBP8.21□□□□□ -1.1
ATM-229ENST00000639953 ARL4DP49703 201 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 C19orf57Q0VDD7 668 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 IKBKEQ14164 716 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 PEAR1Q5VY43 1037 aaPredicted RBP8.21□□□□□ -1.1
ATM-229ENST00000639953 BEND4Q6ZU67 534 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 ASAP3Q8TDY4 903 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 LRRC59Q96AG4 307 aaKnown RBP8.21□□□□□ -1.1
ATM-229ENST00000639953 FAM83CQ9BQN1 747 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 RNF208Q9H0X6 261 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 EVC2Q86UK5 1308 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 LRP6O75581 1613 aa8.21□□□□□ -1.1
ATM-229ENST00000639953 ADAMTS4O75173 837 aa8.2□□□□□ -1.1
ATM-229ENST00000639953 DLGAP3O95886 979 aa8.2□□□□□ -1.1
ATM-229ENST00000639953 ANKRD34AQ69YU3 496 aa8.2□□□□□ -1.1
ATM-229ENST00000639953 PPIP5K1Q6PFW1 1433 aa8.2□□□□□ -1.1
ATM-229ENST00000639953 METTL12A8MUP2 240 aa8.19□□□□□ -1.1
ATM-229ENST00000639953 EDN3P14138 238 aa8.19□□□□□ -1.1
ATM-229ENST00000639953 ZNF211Q13398 564 aaPredicted RBP8.19□□□□□ -1.1
ATM-229ENST00000639953 C12orf50Q8NA57 414 aaPredicted RBP8.19□□□□□ -1.1
ATM-229ENST00000639953 NGDNQ8NEJ9 315 aaKnown RBP8.19□□□□□ -1.1
ATM-229ENST00000639953 ZFYVE28Q9HCC9 887 aa8.19□□□□□ -1.1
ATM-229ENST00000639953 ACEP12821 1306 aa8.19□□□□□ -1.1
ATM-229ENST00000639953 SBNO2Q9Y2G9 1366 aa8.19□□□□□ -1.1
ATM-229ENST00000639953 COL22A1Q8NFW1 1626 aaPredicted RBP8.18□□□□□ -1.1
ATM-229ENST00000639953 ALS2Q96Q42 1657 aa8.18□□□□□ -1.1
ATM-229ENST00000639953 MEGF11A6BM72 1044 aa8.18□□□□□ -1.1
ATM-229ENST00000639953 FDX2Q6P4F2 183 aa8.18□□□□□ -1.1
ATM-229ENST00000639953 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.18□□□□□ -1.1
ATM-229ENST00000639953 SHKBP1Q8TBC3 707 aa8.18□□□□□ -1.1
ATM-229ENST00000639953 SNX29Q8TEQ0 813 aa8.18□□□□□ -1.1
ATM-229ENST00000639953 DBNDD2Q9BQY9 259 aa8.18□□□□□ -1.1
ATM-229ENST00000639953 USP26Q9BXU7 913 aa8.18□□□□□ -1.1
ATM-229ENST00000639953 SPATA31A3Q5VYP0 1347 aa8.18□□□□□ -1.1
ATM-229ENST00000639953 AKAP12Q02952 1782 aa8.17□□□□□ -1.1
ATM-229ENST00000639953 ESRRAP11474 423 aaPredicted RBP8.17□□□□□ -1.1
ATM-229ENST00000639953 DRD2P14416 443 aa8.17□□□□□ -1.1
ATM-229ENST00000639953 USP5P45974 858 aa8.17□□□□□ -1.1
ATM-229ENST00000639953 EHHADHQ08426 723 aa8.17□□□□□ -1.1
ATM-229ENST00000639953 SGO2Q562F6 1265 aa8.17□□□□□ -1.1
ATM-229ENST00000639953 SUPT16HQ9Y5B9 1047 aaKnown RBP8.17□□□□□ -1.1
ATM-229ENST00000639953 SPATA31A6Q5VVP1 1343 aa8.17□□□□□ -1.1
ATM-229ENST00000639953 POLR3AO14802 1390 aaPredicted RBP8.17□□□□□ -1.1
ATM-229ENST00000639953 TNS3Q68CZ2 1445 aa8.17□□□□□ -1.1
ATM-229ENST00000639953 ABCA3Q99758 1704 aa8.17□□□□□ -1.1
ATM-229ENST00000639953 SBNO1A3KN83 1393 aa8.16□□□□□ -1.1
ATM-229ENST00000639953 KIAA1324LA8MWY0 1029 aaPredicted RBP8.16□□□□□ -1.1
ATM-229ENST00000639953 SF3B2Q13435 895 aaKnown RBP8.16□□□□□ -1.1
ATM-229ENST00000639953 MEX3CQ5U5Q3 659 aaKnown RBP8.16□□□□□ -1.1
ATM-229ENST00000639953 NUTM2GQ5VZR2 741 aa8.16□□□□□ -1.1
ATM-229ENST00000639953 SHISA5Q8N114 240 aa8.16□□□□□ -1.1
ATM-229ENST00000639953 GJD3Q8N144 294 aa8.16□□□□□ -1.1
ATM-229ENST00000639953 MFSD14AQ96MC6 490 aa8.16□□□□□ -1.1
ATM-229ENST00000639953 TMPRSS13Q9BYE2 586 aa8.16□□□□□ -1.1
ATM-229ENST00000639953 BHLHE41Q9C0J9 482 aaPredicted RBP8.16□□□□□ -1.1
ATM-229ENST00000639953 MARF1Q9Y4F3 1742 aaKnown RBP8.16□□□□□ -1.1
ATM-229ENST00000639953 OAS3Q9Y6K5 1087 aaKnown RBP8.16□□□□□ -1.1
ATM-229ENST00000639953 CRYBG1Q9Y4K1 1723 aa8.15□□□□□ -1.1
ATM-229ENST00000639953 CD163L1Q9NR16 1453 aa8.15□□□□□ -1.1
ATM-229ENST00000639953 LOC100289279A0A1B0GTE1 492 aa8.15□□□□□ -1.1
ATM-229ENST00000639953 WDR64B1ANS9 1081 aa8.15□□□□□ -1.1
ATM-229ENST00000639953 MAP4P27816 1152 aaKnown RBP8.15□□□□□ -1.1
ATM-229ENST00000639953 GSTM4Q03013 218 aa8.15□□□□□ -1.1
ATM-229ENST00000639953 FAM9BQ8IZU0 186 aa8.15□□□□□ -1.1
ATM-229ENST00000639953 TMC1Q8TDI8 760 aa8.15□□□□□ -1.1
ATM-229ENST00000639953 KRTAP4-12Q9BQ66 201 aa8.15□□□□□ -1.1
ATM-229ENST00000639953 SLC12A5Q9H2X9 1139 aa8.15□□□□□ -1.1
ATM-229ENST00000639953 RGS17Q9UGC6 210 aaPredicted RBP8.15□□□□□ -1.1
ATM-229ENST00000639953 MTMR7Q9Y216 660 aa8.15□□□□□ -1.1
ATM-229ENST00000639953 USP6P35125 1406 aa8.14□□□□□ -1.11
ATM-229ENST00000639953 GAS2O43903 313 aaKnown RBP8.14□□□□□ -1.11
ATM-229ENST00000639953 RXRBP28702 533 aa8.14□□□□□ -1.11
ATM-229ENST00000639953 HOXA10P31260 410 aaPredicted RBP8.14□□□□□ -1.11
ATM-229ENST00000639953 TMF1P82094 1093 aa8.14□□□□□ -1.11
ATM-229ENST00000639953 ECM1Q16610 540 aa8.14□□□□□ -1.11
ATM-229ENST00000639953 SPRED3Q2MJR0 410 aa8.14□□□□□ -1.11
ATM-229ENST00000639953 MCTP1Q6DN14 999 aa8.14□□□□□ -1.11
ATM-229ENST00000639953 SMG8Q8ND04 991 aaKnown RBP8.14□□□□□ -1.11
ATM-229ENST00000639953 C8orf37Q96NL8 207 aa8.14□□□□□ -1.11
ATM-229ENST00000639953 MON2Q7Z3U7 1717 aa8.14□□□□□ -1.11
ATM-229ENST00000639953 MYOM1P52179 1685 aa8.14□□□□□ -1.11
ATM-229ENST00000639953 PHRF1Q9P1Y6 1649 aaKnown RBP8.14□□□□□ -1.11
ATM-229ENST00000639953 NRKQ7Z2Y5 1582 aa8.14□□□□□ -1.11
ATM-229ENST00000639953 CPSF1Q10570 1443 aaKnown RBP8.13□□□□□ -1.11
ATM-229ENST00000639953 ARHGEF10O15013 1369 aa8.13□□□□□ -1.11
ATM-229ENST00000639953 A0A1W2PP55 124 aa8.13□□□□□ -1.11
ATM-229ENST00000639953 SPINK2P20155 84 aa8.13□□□□□ -1.11
ATM-229ENST00000639953 GP2P55259 537 aaKnown RBP8.13□□□□□ -1.11
ATM-229ENST00000639953 HNRNPUQ00839 825 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATM-229ENST00000639953 ZNF423Q2M1K9 1284 aa8.13□□□□□ -1.11
ATM-229ENST00000639953 EXOSC6Q5RKV6 272 aaKnown RBP8.13□□□□□ -1.11
ATM-229ENST00000639953 USPL1Q5W0Q7 1092 aa8.13□□□□□ -1.11
ATM-229ENST00000639953 CDPF1Q6NVV7 123 aa8.13□□□□□ -1.11
ATM-229ENST00000639953 INTS5Q6P9B9 1019 aaKnown RBP8.13□□□□□ -1.11
ATM-229ENST00000639953 PANK3Q9H999 370 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms