RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-256ENST00000639848 JAG1P78504 1218 aa24.29■■□□□ 1.48
HLA-B-256ENST00000639848 GADL1Q6ZQY3 521 aa24.29■■□□□ 1.48
HLA-B-256ENST00000639848 CHD1LQ86WJ1 897 aa24.29■■□□□ 1.48
HLA-B-256ENST00000639848 AMOTL1Q8IY63 956 aa24.29■■□□□ 1.48
HLA-B-256ENST00000639848 PROCA1Q8NCQ7 364 aaPredicted RBP24.29■■□□□ 1.48
HLA-B-256ENST00000639848 OSBP2Q969R2 916 aa24.29■■□□□ 1.48
HLA-B-256ENST00000639848 STRBPQ96SI9 672 aaKnown RBP24.29■■□□□ 1.48
HLA-B-256ENST00000639848 PARK7Q99497 189 aaKnown RBP24.29■■□□□ 1.48
HLA-B-256ENST00000639848 SLC4A4Q9Y6R1 1079 aa24.29■■□□□ 1.48
HLA-B-256ENST00000639848 MYH1P12882 1939 aa24.29■■□□□ 1.48
HLA-B-256ENST00000639848 GDF11O95390 407 aa24.28■■□□□ 1.48
HLA-B-256ENST00000639848 SHMT1P34896 483 aa24.28■■□□□ 1.48
HLA-B-256ENST00000639848 CERKLQ49MI3 558 aaPredicted RBP24.28■■□□□ 1.48
HLA-B-256ENST00000639848 SH3D19Q5HYK7 790 aa24.28■■□□□ 1.48
HLA-B-256ENST00000639848 TICAM2Q86XR7 235 aa24.28■■□□□ 1.48
HLA-B-256ENST00000639848 FSD1Q9BTV5 496 aa24.28■■□□□ 1.48
HLA-B-256ENST00000639848 AGTPBP1Q9UPW5 1226 aa24.28■■□□□ 1.48
HLA-B-256ENST00000639848 NAV1Q8NEY1 1877 aa24.28■■□□□ 1.48
HLA-B-256ENST00000639848 MYH7P12883 1935 aa24.27■■□□□ 1.48
HLA-B-256ENST00000639848 PHIPQ8WWQ0 1821 aa24.27■■□□□ 1.48
HLA-B-256ENST00000639848 B4GALNT3Q6L9W6 998 aa24.27■■□□□ 1.48
HLA-B-256ENST00000639848 GIMAP6Q6P9H5 292 aa24.27■■□□□ 1.48
HLA-B-256ENST00000639848 EVI5LQ96CN4 794 aa24.27■■□□□ 1.48
HLA-B-256ENST00000639848 SWAP70Q9UH65 585 aa24.27■■□□□ 1.48
HLA-B-256ENST00000639848 GH2P01242 217 aa24.26■■□□□ 1.47
HLA-B-256ENST00000639848 GNAT2P19087 354 aa24.26■■□□□ 1.47
HLA-B-256ENST00000639848 ARHGEF6Q15052 776 aa24.26■■□□□ 1.47
HLA-B-256ENST00000639848 C12orf60Q5U649 245 aa24.26■■□□□ 1.47
HLA-B-256ENST00000639848 C17orf99Q6UX52 265 aa24.26■■□□□ 1.47
HLA-B-256ENST00000639848 ADGRA2Q96PE1 1338 aa24.26■■□□□ 1.47
HLA-B-256ENST00000639848 C19orf81C9J6K1 198 aa24.25■■□□□ 1.47
HLA-B-256ENST00000639848 USP17L12C9JPN9 530 aa24.25■■□□□ 1.47
HLA-B-256ENST00000639848 USP17L21D6R901 530 aa24.25■■□□□ 1.47
HLA-B-256ENST00000639848 GPAA1O43292 621 aa24.25■■□□□ 1.47
HLA-B-256ENST00000639848 BACE1P56817 501 aa24.25■■□□□ 1.47
HLA-B-256ENST00000639848 IRX6P78412 446 aaPredicted RBP24.25■■□□□ 1.47
HLA-B-256ENST00000639848 ABCB5Q2M3G0 1257 aa24.25■■□□□ 1.47
HLA-B-256ENST00000639848 ZMYM1Q5SVZ6 1142 aa24.25■■□□□ 1.47
HLA-B-256ENST00000639848 FBXO46Q6PJ61 603 aaPredicted RBP24.25■■□□□ 1.47
HLA-B-256ENST00000639848 OTOP1Q7RTM1 612 aa24.25■■□□□ 1.47
HLA-B-256ENST00000639848 CD99L2Q8TCZ2 262 aa24.25■■□□□ 1.47
HLA-B-256ENST00000639848 CABP5Q9NP86 173 aa24.25■■□□□ 1.47
HLA-B-256ENST00000639848 ARPP21Q9UBL0 812 aaPredicted RBP24.25■■□□□ 1.47
HLA-B-256ENST00000639848 USP17L10C9JJH3 530 aa24.24■■□□□ 1.47
HLA-B-256ENST00000639848 CYP2D6P10635 497 aa24.24■■□□□ 1.47
HLA-B-256ENST00000639848 HMGCS2P54868 508 aa24.24■■□□□ 1.47
HLA-B-256ENST00000639848 PABPC4Q13310 644 aaKnown RBP eCLIP24.24■■□□□ 1.47
HLA-B-256ENST00000639848 SHROOM1Q2M3G4 852 aaPredicted RBP24.24■■□□□ 1.47
HLA-B-256ENST00000639848 OSBPL3Q9H4L5 887 aa24.24■■□□□ 1.47
HLA-B-256ENST00000639848 PNMA3Q9UL41 463 aa24.24■■□□□ 1.47
HLA-B-256ENST00000639848 TRIM17Q9Y577 477 aa24.24■■□□□ 1.47
HLA-B-256ENST00000639848 ATAD5Q96QE3 1844 aa24.24■■□□□ 1.47
HLA-B-256ENST00000639848 GSG1L2A8MUP6 293 aa24.23■■□□□ 1.47
HLA-B-256ENST00000639848 MTMR2Q13614 643 aa24.23■■□□□ 1.47
HLA-B-256ENST00000639848 SBK1Q52WX2 424 aa24.23■■□□□ 1.47
HLA-B-256ENST00000639848 CTR9Q6PD62 1173 aa24.23■■□□□ 1.47
HLA-B-256ENST00000639848 EFCC1Q9HA90 598 aa24.23■■□□□ 1.47
HLA-B-256ENST00000639848 M0R2C6 588 aa24.22■■□□□ 1.47
HLA-B-256ENST00000639848 CAPN15O75808 1086 aa24.22■■□□□ 1.47
HLA-B-256ENST00000639848 CYP2C8P10632 490 aa24.22■■□□□ 1.47
HLA-B-256ENST00000639848 EVX2Q03828 476 aa24.22■■□□□ 1.47
HLA-B-256ENST00000639848 KIF22Q14807 665 aa24.22■■□□□ 1.47
HLA-B-256ENST00000639848 TREML2Q5T2D2 321 aa24.22■■□□□ 1.47
HLA-B-256ENST00000639848 TMOD4Q9NZQ9 345 aa24.22■■□□□ 1.47
HLA-B-256ENST00000639848 CPA4Q9UI42 421 aa24.22■■□□□ 1.47
HLA-B-256ENST00000639848 PTPRFP10586 1907 aa24.22■■□□□ 1.47
HLA-B-256ENST00000639848 BCRP11274 1271 aa24.21■■□□□ 1.47
HLA-B-256ENST00000639848 LACTBP83111 547 aaPredicted RBP24.21■■□□□ 1.47
HLA-B-256ENST00000639848 RAB3GAP1Q15042 981 aa24.21■■□□□ 1.47
HLA-B-256ENST00000639848 C16orf86Q6ZW13 317 aa24.21■■□□□ 1.47
HLA-B-256ENST00000639848 PLEKHM2Q8IWE5 1019 aa24.21■■□□□ 1.47
HLA-B-256ENST00000639848 CCDC17Q96LX7 622 aa24.21■■□□□ 1.47
HLA-B-256ENST00000639848 GNRH1P01148 92 aa24.2■■□□□ 1.46
HLA-B-256ENST00000639848 SMCR8Q8TEV9 937 aaPredicted RBP24.2■■□□□ 1.46
HLA-B-256ENST00000639848 DYNLL2Q96FJ2 89 aa24.2■■□□□ 1.46
HLA-B-256ENST00000639848 LOC285556D6RIA3 1793 aa24.2■■□□□ 1.46
HLA-B-256ENST00000639848 CYP2D7A0A087X1C5 515 aa24.19■■□□□ 1.46
HLA-B-256ENST00000639848 PATL2C9JE40 543 aaKnown RBP24.19■■□□□ 1.46
HLA-B-256ENST00000639848 HOXA7P31268 230 aaPredicted RBP24.19■■□□□ 1.46
HLA-B-256ENST00000639848 TMEM179Q6ZVK1 233 aa24.19■■□□□ 1.46
HLA-B-256ENST00000639848 SLC44A5Q8NCS7 719 aa24.19■■□□□ 1.46
HLA-B-256ENST00000639848 C12orf42Q96LP6 360 aa24.19■■□□□ 1.46
HLA-B-256ENST00000639848 SEC62Q99442 399 aaKnown RBP24.19■■□□□ 1.46
HLA-B-256ENST00000639848 HPS5Q9UPZ3 1129 aa24.19■■□□□ 1.46
HLA-B-256ENST00000639848 OSBPP22059 807 aa24.18■■□□□ 1.46
HLA-B-256ENST00000639848 GUCY1A2P33402 732 aa24.18■■□□□ 1.46
HLA-B-256ENST00000639848 CDK8P49336 464 aa24.18■■□□□ 1.46
HLA-B-256ENST00000639848 USP14P54578 494 aa24.18■■□□□ 1.46
HLA-B-256ENST00000639848 USP17L2Q6R6M4 530 aa24.18■■□□□ 1.46
HLA-B-256ENST00000639848 NACAP1Q9BZK3 213 aa24.18■■□□□ 1.46
HLA-B-256ENST00000639848 KIAA1683Q9H0B3 1180 aa24.18■■□□□ 1.46
HLA-B-256ENST00000639848 EPB41L4AQ9HCS5 686 aaPredicted RBP24.18■■□□□ 1.46
HLA-B-256ENST00000639848 PTPN22Q9Y2R2 807 aa24.18■■□□□ 1.46
HLA-B-256ENST00000639848 ROBO3Q96MS0 1386 aa24.17■■□□□ 1.46
HLA-B-256ENST00000639848 CCDC85CA6NKD9 419 aa24.17■■□□□ 1.46
HLA-B-256ENST00000639848 TDO2P48775 406 aa24.17■■□□□ 1.46
HLA-B-256ENST00000639848 CAP1Q01518 475 aa24.17■■□□□ 1.46
HLA-B-256ENST00000639848 SEPT2Q15019 361 aa24.17■■□□□ 1.46
HLA-B-256ENST00000639848 FEZ1Q99689 392 aa24.17■■□□□ 1.46
HLA-B-256ENST00000639848 HELLSQ9NRZ9 838 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms