RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 LIG1P18858 919 aa16.18■□□□□ 0.18
ATRIP-208ENST00000639561 GUCY1B3Q02153 619 aa16.18■□□□□ 0.18
ATRIP-208ENST00000639561 MAP2K1Q02750 393 aaPredicted RBP16.18■□□□□ 0.18
ATRIP-208ENST00000639561 GNL3LQ9NVN8 582 aaKnown RBP16.18■□□□□ 0.18
ATRIP-208ENST00000639561 SLC4A4Q9Y6R1 1079 aa16.18■□□□□ 0.18
ATRIP-208ENST00000639561 PITPNM2Q9BZ72 1349 aa16.17■□□□□ 0.18
ATRIP-208ENST00000639561 CAVIN4Q5BKX8 364 aa16.17■□□□□ 0.18
ATRIP-208ENST00000639561 CD209Q9NNX6 404 aa16.17■□□□□ 0.18
ATRIP-208ENST00000639561 GNAT2P19087 354 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 CYP7A1P22680 504 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 GIMAP6Q6P9H5 292 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 VPS37DQ86XT2 251 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 IGDCC4Q8TDY8 1250 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 ZNF384Q8TF68 577 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 ANP32BQ92688 251 aaKnown RBP16.16■□□□□ 0.18
ATRIP-208ENST00000639561 CHMP4CQ96CF2 233 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 PGBD1Q96JS3 809 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 FTOQ9C0B1 505 aaKnown RBP eCLIP16.16■□□□□ 0.18
ATRIP-208ENST00000639561 HDAC9Q9UKV0 1011 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 IRS2Q9Y4H2 1338 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 CYP4F22Q6NT55 531 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 FBXO33Q7Z6M2 555 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 WBP1LQ9NX94 342 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 RAI14Q9P0K7 980 aa16.16■□□□□ 0.18
ATRIP-208ENST00000639561 ADM5C9JUS6 153 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 DHX16O60231 1041 aaKnown RBP16.15■□□□□ 0.18
ATRIP-208ENST00000639561 TDO2P48775 406 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 CTCFP49711 727 aaPredicted RBP16.15■□□□□ 0.18
ATRIP-208ENST00000639561 ANGEL2Q5VTE6 544 aaKnown RBP16.15■□□□□ 0.18
ATRIP-208ENST00000639561 APOA5Q6Q788 366 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 FUCA2Q9BTY2 467 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 LETM1O95202 739 aaPredicted RBP16.15■□□□□ 0.18
ATRIP-208ENST00000639561 RXRAP19793 462 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 GTF2IP78347 998 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 AKNAD1Q5T1N1 836 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 OTUD7BQ6GQQ9 843 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 C2orf69Q8N8R5 385 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 PDLIM2Q96JY6 352 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 LY9Q9HBG7 655 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 GBA2Q9HCG7 927 aaPredicted RBP16.15■□□□□ 0.18
ATRIP-208ENST00000639561 ZSWIM5Q9P217 1185 aa16.15■□□□□ 0.18
ATRIP-208ENST00000639561 MYH13Q9UKX3 1938 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 KDM4AO75164 1064 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 MAP2K2P36507 400 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 CEBPZQ03701 1054 aaKnown RBP16.14■□□□□ 0.17
ATRIP-208ENST00000639561 COL13A1Q5TAT6 717 aaPredicted RBP16.14■□□□□ 0.17
ATRIP-208ENST00000639561 SDR42E1Q8WUS8 393 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 TMEM87BQ96K49 555 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 RIOK1Q9BRS2 568 aaKnown RBP16.14■□□□□ 0.17
ATRIP-208ENST00000639561 NACAP1Q9BZK3 213 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 ORC3Q9UBD5 711 aaPredicted RBP16.14■□□□□ 0.17
ATRIP-208ENST00000639561 CPLX1O14810 134 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 FOXN1O15353 648 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 IL1R1P14778 569 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 GRM1Q13255 1194 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 TRIM44Q96DX7 344 aaPredicted RBP16.14■□□□□ 0.17
ATRIP-208ENST00000639561 MXD3Q9BW11 206 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 GJB4Q9NTQ9 266 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 CFAP45Q9UL16 551 aa16.14■□□□□ 0.17
ATRIP-208ENST00000639561 ECM29Q5VYK3 1845 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 HUNKP57058 714 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 SGMS1Q86VZ5 419 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 STAG1Q8WVM7 1258 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 BEGAINQ9BUH8 593 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 ASTN2O75129 1339 aaPredicted RBP16.13■□□□□ 0.17
ATRIP-208ENST00000639561 MAGEB6P1A0A0J9YX57 407 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 SMIM22K7EJ46 135 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 CDC27P30260 824 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 METAP2P50579 478 aaKnown RBP eCLIP16.13■□□□□ 0.17
ATRIP-208ENST00000639561 FKBP1AP62942 108 aaKnown RBP16.13■□□□□ 0.17
ATRIP-208ENST00000639561 TMEM67Q5HYA8 995 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 MFSD6Q6ZSS7 791 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 MICU3Q86XE3 530 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 CDCA5Q96FF9 252 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 CNNM2Q9H8M5 875 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 PRDM10Q9NQV6 1147 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 DACT1Q9NYF0 836 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 PAPPA2Q9BXP8 1791 aa16.13■□□□□ 0.17
ATRIP-208ENST00000639561 GOLGA6L4A6NEF3 574 aa16.12■□□□□ 0.17
ATRIP-208ENST00000639561 FBXO18Q8NFZ0 1043 aa16.12■□□□□ 0.17
ATRIP-208ENST00000639561 C8orf76Q96K31 380 aa16.12■□□□□ 0.17
ATRIP-208ENST00000639561 MYL10Q9BUA6 226 aa16.12■□□□□ 0.17
ATRIP-208ENST00000639561 BAZ2AQ9UIF9 1905 aaKnown RBP16.12■□□□□ 0.17
ATRIP-208ENST00000639561 SEMA3EO15041 775 aa16.12■□□□□ 0.17
ATRIP-208ENST00000639561 HIBADHP31937 336 aaKnown RBP16.12■□□□□ 0.17
ATRIP-208ENST00000639561 DYNLL1P63167 89 aaKnown RBP16.12■□□□□ 0.17
ATRIP-208ENST00000639561 KIAA0825Q8IV33 1275 aa16.12■□□□□ 0.17
ATRIP-208ENST00000639561 CCDC144CPQ8IYA2 1237 aa16.12■□□□□ 0.17
ATRIP-208ENST00000639561 TNS4Q8IZW8 715 aa16.12■□□□□ 0.17
ATRIP-208ENST00000639561 STK11IPQ8N1F8 1099 aa16.12■□□□□ 0.17
ATRIP-208ENST00000639561 NR1I2O75469 434 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 LIFRP42702 1097 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 PPARAQ07869 468 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 CAMK4Q16566 473 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
ATRIP-208ENST00000639561 KRT23Q9C075 422 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 NUP62CLQ9H1M0 184 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 FAM217BQ9NTX9 383 aaPredicted RBP16.11■□□□□ 0.17
ATRIP-208ENST00000639561 RCOR1Q9UKL0 485 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms