RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 FERMT2Q96AC1 680 aa16.21■□□□□ 0.19
SCARB2-216ENST00000639300 NONOQ15233 471 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCARB2-216ENST00000639300 PTPN21Q16825 1174 aa16.21■□□□□ 0.19
SCARB2-216ENST00000639300 HS2ST1Q7LGA3 356 aa16.21■□□□□ 0.19
SCARB2-216ENST00000639300 PKD2L1Q9P0L9 805 aa16.21■□□□□ 0.19
SCARB2-216ENST00000639300 LRWD1Q9UFC0 647 aa16.21■□□□□ 0.19
SCARB2-216ENST00000639300 ZDHHC9Q9Y397 364 aa16.21■□□□□ 0.19
SCARB2-216ENST00000639300 CIAO1O76071 339 aa16.21■□□□□ 0.18
SCARB2-216ENST00000639300 TCP10Q12799 353 aa16.21■□□□□ 0.18
SCARB2-216ENST00000639300 PAF1Q8N7H5 531 aa16.21■□□□□ 0.18
SCARB2-216ENST00000639300 BICD1Q96G01 975 aa16.21■□□□□ 0.18
SCARB2-216ENST00000639300 DESI2Q9BSY9 194 aa16.21■□□□□ 0.18
SCARB2-216ENST00000639300 TTLL12Q14166 644 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-216ENST00000639300 DCAF17Q5H9S7 520 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-216ENST00000639300 SPECC1LQ69YQ0 1117 aa16.2■□□□□ 0.18
SCARB2-216ENST00000639300 WDR17Q8IZU2 1322 aa16.2■□□□□ 0.18
SCARB2-216ENST00000639300 ZSCAN10Q96SZ4 725 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-216ENST00000639300 SLF1Q9BQI6 1058 aa16.2■□□□□ 0.18
SCARB2-216ENST00000639300 FAM13AO94988 1023 aa16.2■□□□□ 0.18
SCARB2-216ENST00000639300 KRT13P13646 458 aa16.2■□□□□ 0.18
SCARB2-216ENST00000639300 DPCR1Q3MIW9 517 aa16.2■□□□□ 0.18
SCARB2-216ENST00000639300 NLRP10Q86W26 655 aa16.2■□□□□ 0.18
SCARB2-216ENST00000639300 SYNE4Q8N205 404 aa16.2■□□□□ 0.18
SCARB2-216ENST00000639300 RTEL1Q9NZ71 1219 aa16.2■□□□□ 0.18
SCARB2-216ENST00000639300 RCOR1Q9UKL0 485 aa16.2■□□□□ 0.18
SCARB2-216ENST00000639300 DNAJC21Q5F1R6 531 aaKnown RBP16.2■□□□□ 0.18
SCARB2-216ENST00000639300 GOLGA8HP0CJ92 632 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 RAPGEF1Q13905 1077 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 IFI16Q16666 785 aaKnown RBP16.19■□□□□ 0.18
SCARB2-216ENST00000639300 KIAA0753Q2KHM9 967 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 C11orf57Q6ZUT1 292 aaPredicted RBP16.19■□□□□ 0.18
SCARB2-216ENST00000639300 CARMIL3Q8ND23 1372 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 CRKLP46109 303 aaKnown RBP16.19■□□□□ 0.18
SCARB2-216ENST00000639300 KRBA2Q6ZNG9 492 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 TBC1D5Q92609 795 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 RBM17Q96I25 401 aaKnown RBP16.19■□□□□ 0.18
SCARB2-216ENST00000639300 WDHD1O75717 1129 aaPredicted RBP16.19■□□□□ 0.18
SCARB2-216ENST00000639300 CAPN2P17655 700 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 TRAF1Q13077 416 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 LRRC8AQ8IWT6 810 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 SNX29Q8TEQ0 813 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 UBE2Q2Q8WVN8 375 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 PIGBQ92521 554 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 OGFRQ9NZT2 677 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 TBC1D7Q9P0N9 293 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 SPHKAPQ2M3C7 1700 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 TERF1P54274 439 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 RNASE9P60153 205 aaKnown RBP16.19■□□□□ 0.18
SCARB2-216ENST00000639300 SLC39A14Q15043 492 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 PNMA1Q8ND90 353 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 VPS18Q9P253 973 aa16.19■□□□□ 0.18
SCARB2-216ENST00000639300 ZNF215Q9UL58 517 aaPredicted RBP16.19■□□□□ 0.18
SCARB2-216ENST00000639300 LRRC7Q96NW7 1537 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 GOLGA6L7A0A1B0GV03 622 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 HSF2BPO75031 334 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 SP4Q02446 784 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 CCDC65Q8IXS2 484 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 CACTINQ8WUQ7 758 aaKnown RBP16.18■□□□□ 0.18
SCARB2-216ENST00000639300 NELFBQ8WX92 580 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 IFT81Q8WYA0 676 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 GPKOWQ92917 476 aaPredicted RBP eCLIP16.18■□□□□ 0.18
SCARB2-216ENST00000639300 PSMB7Q99436 277 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 HDAC9Q9UKV0 1011 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 HEG1Q9ULI3 1381 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 H7C1W4 665 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 ZYXQ15942 572 aaKnown RBP16.18■□□□□ 0.18
SCARB2-216ENST00000639300 HERC4Q5GLZ8 1057 aaPredicted RBP16.18■□□□□ 0.18
SCARB2-216ENST00000639300 MFSD14BQ5SR56 506 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 MRFAP1L1Q96HT8 127 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 ALKQ9UM73 1620 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 LRRIQ1Q96JM4 1722 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 ADD2P35612 726 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 GTF2IP78347 998 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 CHMP2AO43633 222 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 INF2Q27J81 1249 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 RGS22Q8NE09 1264 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 EYA3Q99504 573 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 RSPH14Q9UHP6 348 aa16.18■□□□□ 0.18
SCARB2-216ENST00000639300 ABCA6Q8N139 1617 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 CTNNA2P26232 953 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
SCARB2-216ENST00000639300 SLC1A4P43007 532 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 MAP2K1Q02750 393 aaPredicted RBP16.17■□□□□ 0.18
SCARB2-216ENST00000639300 NR5A1Q13285 461 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 ERCC6LQ2NKX8 1250 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 LINC00301Q8NCQ3 95 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 CCDC172P0C7W6 258 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 RBM6P78332 1123 aaKnown RBP16.17■□□□□ 0.18
SCARB2-216ENST00000639300 PTGDRQ13258 359 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 FAM182BQ5T319 152 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 ZSWIM5Q9P217 1185 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 E9PCH4 1651 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 COBLO75128 1261 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 REXO1Q8N1G1 1221 aaKnown RBP16.17■□□□□ 0.18
SCARB2-216ENST00000639300 NAPGQ99747 312 aaPredicted RBP16.17■□□□□ 0.18
SCARB2-216ENST00000639300 TAOK3Q9H2K8 898 aa16.17■□□□□ 0.18
SCARB2-216ENST00000639300 NPHP4O75161 1426 aaPredicted RBP16.17■□□□□ 0.18
SCARB2-216ENST00000639300 A0A1W2PQ27 194 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms