RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 HLA-DOAP06340 250 aa17.82■□□□□ 0.44
SPIN3-219ENST00000639053 SLURP2P0DP57 97 aa17.82■□□□□ 0.44
SPIN3-219ENST00000639053 RASA1P20936 1047 aa17.82■□□□□ 0.44
SPIN3-219ENST00000639053 GABPAQ06546 454 aa17.82■□□□□ 0.44
SPIN3-219ENST00000639053 ZSCAN29Q8IWY8 852 aaPredicted RBP17.82■□□□□ 0.44
SPIN3-219ENST00000639053 GPRC5DQ9NZD1 345 aa17.82■□□□□ 0.44
SPIN3-219ENST00000639053 NAP1L2Q9ULW6 460 aaPredicted RBP17.82■□□□□ 0.44
SPIN3-219ENST00000639053 CNTNAP1P78357 1384 aa17.82■□□□□ 0.44
SPIN3-219ENST00000639053 KLF18A0A0U1RQI7 1052 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 MYO1BO43795 1136 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 UBAC1Q9BSL1 405 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 DHX36Q9H2U1 1008 aaKnown RBP17.81■□□□□ 0.44
SPIN3-219ENST00000639053 ATP6V1DQ9Y5K8 247 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 TSPY2A6NKD2 308 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 H7C1D1 291 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 STX6O43752 255 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 DTNBO60941 627 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 ZSCAN22P10073 491 aaPredicted RBP17.81■□□□□ 0.44
SPIN3-219ENST00000639053 PDIA3P30101 505 aaKnown RBP17.81■□□□□ 0.44
SPIN3-219ENST00000639053 EVCP57679 992 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 TFAP4Q01664 338 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 SART3Q15020 963 aaKnown RBP17.81■□□□□ 0.44
SPIN3-219ENST00000639053 KIF4BQ2VIQ3 1234 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 ZNF444Q8N0Y2 327 aaPredicted RBP17.81■□□□□ 0.44
SPIN3-219ENST00000639053 ZSCAN10Q96SZ4 725 aaPredicted RBP17.81■□□□□ 0.44
SPIN3-219ENST00000639053 ZNF287Q9HBT7 754 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 SERPINB13Q9UIV8 391 aa17.81■□□□□ 0.44
SPIN3-219ENST00000639053 ASTN2O75129 1339 aaPredicted RBP17.81■□□□□ 0.44
SPIN3-219ENST00000639053 NMT2O60551 498 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
SPIN3-219ENST00000639053 EPS15P42566 896 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 WTAPQ15007 396 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 SEC23AQ15436 765 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 FKBP1CQ5VVH2 108 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 RAB11FIP4Q86YS3 637 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 FAM151AQ8WW52 585 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 ZNF274Q96GC6 653 aaPredicted RBP17.8■□□□□ 0.44
SPIN3-219ENST00000639053 MTA3Q9BTC8 594 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 EHD4Q9H223 541 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 TNKSO95271 1327 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 ATRNL1Q5VV63 1379 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 COL2A1P02458 1487 aaPredicted RBP17.8■□□□□ 0.44
SPIN3-219ENST00000639053 SIPA1L1O43166 1804 aa17.8■□□□□ 0.44
SPIN3-219ENST00000639053 ERICH2A1L162 156 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 PFKFB2O60825 505 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 SYT1P21579 422 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 LIFRP42702 1097 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 ZNF445P59923 1031 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 NFXL1Q6ZNB6 911 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 IQCA1Q86XH1 822 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 ENAHQ8N8S7 591 aaPredicted RBP17.79■□□□□ 0.44
SPIN3-219ENST00000639053 TMEM87AQ8NBN3 555 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 TRPM4Q8TD43 1214 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 PI4KBQ9UBF8 816 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 FAM196BA6NMK8 535 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 GOLGA8BA8MQT2 603 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 PDCP20941 246 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 GJB2P29033 226 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 SHMT1P34896 483 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 CCT2P78371 535 aaKnown RBP17.79■□□□□ 0.44
SPIN3-219ENST00000639053 SGMS1Q86VZ5 419 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 GTF3C6Q969F1 213 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 DNAJC18Q9H819 358 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 SWAP70Q9UH65 585 aa17.79■□□□□ 0.44
SPIN3-219ENST00000639053 SCAF8Q9UPN6 1271 aaKnown RBP17.79■□□□□ 0.44
SPIN3-219ENST00000639053 CCDC69A6NI79 296 aa17.78■□□□□ 0.44
SPIN3-219ENST00000639053 TSPY3P0CV98 308 aa17.78■□□□□ 0.44
SPIN3-219ENST00000639053 TSPY8P0CW00 308 aa17.78■□□□□ 0.44
SPIN3-219ENST00000639053 SCRN1Q12765 414 aa17.78■□□□□ 0.44
SPIN3-219ENST00000639053 APOA5Q6Q788 366 aa17.78■□□□□ 0.44
SPIN3-219ENST00000639053 CRACR2BQ8N4Y2 399 aaPredicted RBP17.78■□□□□ 0.44
SPIN3-219ENST00000639053 TMEM39BQ9GZU3 492 aa17.78■□□□□ 0.44
SPIN3-219ENST00000639053 NCOA5Q9HCD5 579 aaKnown RBP17.78■□□□□ 0.44
SPIN3-219ENST00000639053 HPS5Q9UPZ3 1129 aa17.78■□□□□ 0.44
SPIN3-219ENST00000639053 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.44
SPIN3-219ENST00000639053 NT5C2P49902 561 aa17.77■□□□□ 0.44
SPIN3-219ENST00000639053 FAM83AQ86UY5 434 aa17.77■□□□□ 0.44
SPIN3-219ENST00000639053 CDAN1Q8IWY9 1227 aa17.77■□□□□ 0.44
SPIN3-219ENST00000639053 CSRNP1Q96S65 589 aa17.77■□□□□ 0.44
SPIN3-219ENST00000639053 GRPEL1Q9HAV7 217 aa17.77■□□□□ 0.44
SPIN3-219ENST00000639053 IL17RBQ9NRM6 502 aa17.77■□□□□ 0.44
SPIN3-219ENST00000639053 HACL1Q9UJ83 578 aa17.77■□□□□ 0.44
SPIN3-219ENST00000639053 F13A1P00488 732 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 FOXP4Q8IVH2 680 aaPredicted RBP17.76■□□□□ 0.43
SPIN3-219ENST00000639053 CHMP4CQ96CF2 233 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 MYL10Q9BUA6 226 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 AKR1B1P15121 316 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 RXRAP19793 462 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 HIRAP54198 1017 aaPredicted RBP17.76■□□□□ 0.43
SPIN3-219ENST00000639053 RASA3Q14644 834 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 IFIT1BQ5T764 474 aaKnown RBP17.76■□□□□ 0.43
SPIN3-219ENST00000639053 FOXD4L5Q5VV16 416 aaPredicted RBP17.76■□□□□ 0.43
SPIN3-219ENST00000639053 RCSD1Q6JBY9 416 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 METTL16Q86W50 562 aaKnown RBP17.76■□□□□ 0.43
SPIN3-219ENST00000639053 TMTC2Q8N394 836 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 NEDD1Q8NHV4 660 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 GPT2Q8TD30 523 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 FOXD4L4Q8WXT5 416 aaPredicted RBP17.76■□□□□ 0.43
SPIN3-219ENST00000639053 TRIM34Q9BYJ4 488 aa17.76■□□□□ 0.43
SPIN3-219ENST00000639053 SLC12A7Q9Y666 1083 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms