RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 TACC3Q9Y6A5 838 aa6.83□□□□□ -1.32
CCDC7-211ENST00000638889 LDHBP07195 334 aaKnown RBP6.82□□□□□ -1.32
CCDC7-211ENST00000638889 GLI1P08151 1106 aa6.82□□□□□ -1.32
CCDC7-211ENST00000638889 ETF1P62495 437 aaKnown RBP6.82□□□□□ -1.32
CCDC7-211ENST00000638889 WIPI1Q5MNZ9 446 aaPredicted RBP6.82□□□□□ -1.32
CCDC7-211ENST00000638889 TTBK2Q6IQ55 1244 aa6.82□□□□□ -1.32
CCDC7-211ENST00000638889 KRTAP4-7Q9BYR0 210 aa6.82□□□□□ -1.32
CCDC7-211ENST00000638889 CARS2Q9HA77 564 aaKnown RBP6.82□□□□□ -1.32
CCDC7-211ENST00000638889 ATP13A1Q9HD20 1204 aa6.82□□□□□ -1.32
CCDC7-211ENST00000638889 PRR33A8MZF0 331 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 CST3P01034 146 aaPredicted RBP6.81□□□□□ -1.32
CCDC7-211ENST00000638889 P4HBP07237 508 aaKnown RBP6.81□□□□□ -1.32
CCDC7-211ENST00000638889 CYP7A1P22680 504 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 EIF4BP23588 611 aaKnown RBP6.81□□□□□ -1.32
CCDC7-211ENST00000638889 GNA15P30679 374 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 GDNFP39905 211 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 KIR3DL1P43629 444 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 FGD1P98174 961 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 NKG7Q16617 165 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 MLANAQ16655 118 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 LETMD1Q6P1Q0 360 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 ST14Q9Y5Y6 855 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 CAPN6Q9Y6Q1 641 aa6.81□□□□□ -1.32
CCDC7-211ENST00000638889 CNTNAP4Q9C0A0 1308 aa6.8□□□□□ -1.32
CCDC7-211ENST00000638889 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.8□□□□□ -1.32
CCDC7-211ENST00000638889 CDKAL1Q5VV42 579 aa6.8□□□□□ -1.32
CCDC7-211ENST00000638889 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.8□□□□□ -1.32
CCDC7-211ENST00000638889 KIRREL1Q96J84 757 aa6.8□□□□□ -1.32
CCDC7-211ENST00000638889 PPP1R16BQ96T49 567 aa6.8□□□□□ -1.32
CCDC7-211ENST00000638889 LMNB1P20700 586 aa6.79□□□□□ -1.32
CCDC7-211ENST00000638889 FBLN7Q53RD9 439 aa6.79□□□□□ -1.32
CCDC7-211ENST00000638889 TMEM67Q5HYA8 995 aa6.79□□□□□ -1.32
CCDC7-211ENST00000638889 FYB2Q5VWT5 728 aa6.79□□□□□ -1.32
CCDC7-211ENST00000638889 SPOCD1Q6ZMY3 1216 aa6.79□□□□□ -1.32
CCDC7-211ENST00000638889 LIN37Q96GY3 246 aaPredicted RBP6.79□□□□□ -1.32
CCDC7-211ENST00000638889 PATL2C9JE40 543 aaKnown RBP6.78□□□□□ -1.32
CCDC7-211ENST00000638889 H3BS24 57 aa6.78□□□□□ -1.32
CCDC7-211ENST00000638889 GFRA2O00451 464 aa6.78□□□□□ -1.32
CCDC7-211ENST00000638889 PRPF40AO75400 957 aaKnown RBP6.78□□□□□ -1.32
CCDC7-211ENST00000638889 TSPAN15O95858 294 aa6.78□□□□□ -1.32
CCDC7-211ENST00000638889 GRK4P32298 578 aa6.78□□□□□ -1.32
CCDC7-211ENST00000638889 CCDC85BQ15834 202 aaPredicted RBP6.78□□□□□ -1.32
CCDC7-211ENST00000638889 PRAMEF13Q5VWM6 474 aa6.78□□□□□ -1.32
CCDC7-211ENST00000638889 MRPL41Q8IXM3 137 aaKnown RBP6.78□□□□□ -1.32
CCDC7-211ENST00000638889 RIN3Q8TB24 985 aa6.78□□□□□ -1.32
CCDC7-211ENST00000638889 ALPK1Q96QP1 1244 aa6.78□□□□□ -1.32
CCDC7-211ENST00000638889 C19orf73Q9NVV2 129 aa6.78□□□□□ -1.32
CCDC7-211ENST00000638889 AK5Q9Y6K8 562 aa6.78□□□□□ -1.32
CCDC7-211ENST00000638889 RAP1GAPP47736 663 aa6.77□□□□□ -1.33
CCDC7-211ENST00000638889 CDK8P49336 464 aa6.77□□□□□ -1.33
CCDC7-211ENST00000638889 MPZL3Q6UWV2 235 aa6.77□□□□□ -1.33
CCDC7-211ENST00000638889 AGMOQ6ZNB7 445 aa6.77□□□□□ -1.33
CCDC7-211ENST00000638889 PIWIL2Q8TC59 973 aaKnown RBP6.77□□□□□ -1.33
CCDC7-211ENST00000638889 CBX7O95931 251 aa6.76□□□□□ -1.33
CCDC7-211ENST00000638889 SLC6A19Q695T7 634 aa6.76□□□□□ -1.33
CCDC7-211ENST00000638889 TMPRSS7Q7RTY8 843 aa6.76□□□□□ -1.33
CCDC7-211ENST00000638889 CILP2Q8IUL8 1156 aa6.76□□□□□ -1.33
CCDC7-211ENST00000638889 UBE2FQ969M7 185 aa6.76□□□□□ -1.33
CCDC7-211ENST00000638889 TOX2Q96NM4 488 aa6.76□□□□□ -1.33
CCDC7-211ENST00000638889 RLBP1P12271 317 aa6.75□□□□□ -1.33
CCDC7-211ENST00000638889 ETV3P41162 512 aa6.75□□□□□ -1.33
CCDC7-211ENST00000638889 LIG3P49916 1009 aa6.75□□□□□ -1.33
CCDC7-211ENST00000638889 PDE4BQ07343 736 aa6.75□□□□□ -1.33
CCDC7-211ENST00000638889 TNK2Q07912 1038 aa6.75□□□□□ -1.33
CCDC7-211ENST00000638889 SEPT6Q14141 434 aa6.75□□□□□ -1.33
CCDC7-211ENST00000638889 MIR1-1HGQ9H1L0 117 aa6.75□□□□□ -1.33
CCDC7-211ENST00000638889 PCDHB5Q9Y5E4 795 aa6.75□□□□□ -1.33
CCDC7-211ENST00000638889 PGRP06401 933 aa6.74□□□□□ -1.33
CCDC7-211ENST00000638889 TSNAXIP1Q2TAA8 658 aa6.74□□□□□ -1.33
CCDC7-211ENST00000638889 PRR23BQ6ZRT6 265 aa6.74□□□□□ -1.33
CCDC7-211ENST00000638889 SYDE1Q6ZW31 735 aaPredicted RBP6.74□□□□□ -1.33
CCDC7-211ENST00000638889 CDH24Q86UP0 819 aa6.74□□□□□ -1.33
CCDC7-211ENST00000638889 XAGE3Q8WTP9 111 aa6.74□□□□□ -1.33
CCDC7-211ENST00000638889 ZSWIM5Q9P217 1185 aa6.74□□□□□ -1.33
CCDC7-211ENST00000638889 TJP2Q9UDY2 1190 aa6.74□□□□□ -1.33
CCDC7-211ENST00000638889 ADAM30Q9UKF2 790 aa6.74□□□□□ -1.33
CCDC7-211ENST00000638889 RAC2P15153 192 aa6.73□□□□□ -1.33
CCDC7-211ENST00000638889 DIEXFQ68CQ4 756 aaKnown RBP6.73□□□□□ -1.33
CCDC7-211ENST00000638889 MCATQ8IVS2 390 aaKnown RBP6.73□□□□□ -1.33
CCDC7-211ENST00000638889 FBXO15Q8NCQ5 510 aaPredicted RBP6.73□□□□□ -1.33
CCDC7-211ENST00000638889 TMEM87BQ96K49 555 aa6.73□□□□□ -1.33
CCDC7-211ENST00000638889 ESR1P03372 595 aa6.72□□□□□ -1.33
CCDC7-211ENST00000638889 RPL6Q02878 288 aaKnown RBP6.72□□□□□ -1.33
CCDC7-211ENST00000638889 TTC6Q86TZ1 520 aa6.72□□□□□ -1.33
CCDC7-211ENST00000638889 ANKLE2Q86XL3 938 aa6.72□□□□□ -1.33
CCDC7-211ENST00000638889 ZSCAN18Q8TBC5 510 aaPredicted RBP6.72□□□□□ -1.33
CCDC7-211ENST00000638889 NOC4LQ9BVI4 516 aaKnown RBP6.72□□□□□ -1.33
CCDC7-211ENST00000638889 SLAMF8Q9P0V8 285 aa6.72□□□□□ -1.33
CCDC7-211ENST00000638889 TMEM59LQ9UK28 342 aa6.72□□□□□ -1.33
CCDC7-211ENST00000638889 NFIBO00712 420 aa6.71□□□□□ -1.34
CCDC7-211ENST00000638889 TFE3P19532 575 aaPredicted RBP6.71□□□□□ -1.34
CCDC7-211ENST00000638889 EAPPQ56P03 285 aaPredicted RBP6.71□□□□□ -1.34
CCDC7-211ENST00000638889 SIAH1Q8IUQ4 282 aa6.71□□□□□ -1.34
CCDC7-211ENST00000638889 DNAJB8Q8NHS0 232 aa6.71□□□□□ -1.34
CCDC7-211ENST00000638889 ABHD4Q8TB40 342 aa6.71□□□□□ -1.34
CCDC7-211ENST00000638889 DUSP9Q99956 384 aaKnown RBP6.71□□□□□ -1.34
CCDC7-211ENST00000638889 TRAIPQ9BWF2 469 aa6.71□□□□□ -1.34
CCDC7-211ENST00000638889 TRIT1Q9H3H1 467 aaKnown RBP6.71□□□□□ -1.34
CCDC7-211ENST00000638889 CEP131Q9UPN4 1083 aa6.71□□□□□ -1.34
CCDC7-211ENST00000638889 CFPP27918 469 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms