RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 RASA1P20936 1047 aa12.07□□□□□ -0.48
LINC00598-216ENST00000638163 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
LINC00598-216ENST00000638163 METAP2P50579 478 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC00598-216ENST00000638163 CYB5R4Q7L1T6 521 aa12.07□□□□□ -0.48
LINC00598-216ENST00000638163 ZSCAN29Q8IWY8 852 aaPredicted RBP12.07□□□□□ -0.48
LINC00598-216ENST00000638163 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
LINC00598-216ENST00000638163 FAM177A1Q8N128 213 aaPredicted RBP12.07□□□□□ -0.48
LINC00598-216ENST00000638163 PRMT6Q96LA8 375 aaPredicted RBP12.07□□□□□ -0.48
LINC00598-216ENST00000638163 GPRC5DQ9NZD1 345 aa12.07□□□□□ -0.48
LINC00598-216ENST00000638163 RNF181Q9P0P0 153 aa12.07□□□□□ -0.48
LINC00598-216ENST00000638163 FAM198AQ9UFP1 575 aa12.07□□□□□ -0.48
LINC00598-216ENST00000638163 CNOT7Q9UIV1 285 aaKnown RBP12.07□□□□□ -0.48
LINC00598-216ENST00000638163 WDR33Q9C0J8 1336 aaKnown RBP12.07□□□□□ -0.48
LINC00598-216ENST00000638163 WNT10BO00744 389 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 PLCD1P51178 756 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 TFAP4Q01664 338 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 APOBRQ0VD83 1088 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 SEC23AQ15436 765 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 KIF4BQ2VIQ3 1234 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 NOL8Q76FK4 1167 aaKnown RBP12.06□□□□□ -0.48
LINC00598-216ENST00000638163 CCDC83Q8IWF9 413 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 FAM184AQ8NB25 1140 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 L3MBTL3Q96JM7 780 aaPredicted RBP12.06□□□□□ -0.48
LINC00598-216ENST00000638163 GBP4Q96PP9 640 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 CSRNP1Q96S65 589 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 LZTS2Q9BRK4 669 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 TDRD3Q9H7E2 651 aaKnown RBP12.06□□□□□ -0.48
LINC00598-216ENST00000638163 KAT14Q9H8E8 782 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 DDX4Q9NQI0 724 aaKnown RBP12.06□□□□□ -0.48
LINC00598-216ENST00000638163 SAP30BPQ9UHR5 308 aaKnown RBP12.06□□□□□ -0.48
LINC00598-216ENST00000638163 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
LINC00598-216ENST00000638163 GJA3Q9Y6H8 435 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 STK36Q9NRP7 1315 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 CDK5RAP2Q96SN8 1893 aa12.06□□□□□ -0.48
LINC00598-216ENST00000638163 CYP2D7A0A087X1C5 515 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 IQCA1LA6NCM1 817 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 GOLGA8AA7E2F4 631 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 NOVP48745 357 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 SLC4A3P48751 1232 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 NFIAQ12857 509 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 TATDN1Q6P1N9 297 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 TRIM22Q8IYM9 498 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 ZNF654Q8IZM8 581 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 ENAHQ8N8S7 591 aaPredicted RBP12.05□□□□□ -0.48
LINC00598-216ENST00000638163 CTCFLQ8NI51 663 aaPredicted RBP12.05□□□□□ -0.48
LINC00598-216ENST00000638163 SMARCC2Q8TAQ2 1214 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 TCEANC2Q96MN5 208 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 NAP1L2Q9ULW6 460 aaPredicted RBP12.05□□□□□ -0.48
LINC00598-216ENST00000638163 MYH1P12882 1939 aa12.05□□□□□ -0.48
LINC00598-216ENST00000638163 BAZ2AQ9UIF9 1905 aaKnown RBP12.05□□□□□ -0.48
LINC00598-216ENST00000638163 GOLGA6L22H0YM25 854 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 CYP2D6P10635 497 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
LINC00598-216ENST00000638163 SMARCA1P28370 1054 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 SCRN1Q12765 414 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 RAB3GAP1Q15042 981 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 RTN1Q16799 776 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 DCAF15Q66K64 600 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 TMEM179Q6ZVK1 233 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 CHST3Q7LGC8 479 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
LINC00598-216ENST00000638163 LRRC2Q9BYS8 371 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 SH2D4AQ9H788 454 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 KANSL2Q9H9L4 492 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 CABP5Q9NP86 173 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 ADARB2Q9NS39 739 aaKnown RBP12.04□□□□□ -0.48
LINC00598-216ENST00000638163 ZNF541Q9H0D2 1346 aa12.04□□□□□ -0.48
LINC00598-216ENST00000638163 PRDM1O75626 825 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 TTLL1O95922 423 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 IFNAR1P17181 557 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 XBP1P17861 261 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 GJB2P29033 226 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 CERKLQ49MI3 558 aaPredicted RBP12.03□□□□□ -0.48
LINC00598-216ENST00000638163 C9orf131Q5VYM1 1079 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 RCSD1Q6JBY9 416 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 CLEC17AQ6ZS10 378 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 USP50Q70EL3 339 aaPredicted RBP12.03□□□□□ -0.48
LINC00598-216ENST00000638163 MICU3Q86XE3 530 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 FANCBQ8NB91 859 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 VEZTQ9HBM0 779 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 SBF1O95248 1867 aa12.03□□□□□ -0.48
LINC00598-216ENST00000638163 STX6O43752 255 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 LARGE1O95461 756 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 SHMT1P34896 483 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 PRELPP51888 382 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 AKAP17AQ02040 695 aaKnown RBP12.02□□□□□ -0.49
LINC00598-216ENST00000638163 TCP10Q12799 353 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 STK3Q13188 491 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 CSPP1Q1MSJ5 1256 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.49
LINC00598-216ENST00000638163 ZNF784Q8NCA9 323 aaPredicted RBP12.02□□□□□ -0.49
LINC00598-216ENST00000638163 PNMA1Q8ND90 353 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 NSUN7Q8NE18 718 aaKnown RBP12.02□□□□□ -0.49
LINC00598-216ENST00000638163 DYNLL2Q96FJ2 89 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 RNF26Q9BY78 433 aaPredicted RBP12.02□□□□□ -0.49
LINC00598-216ENST00000638163 MTMR4Q9NYA4 1195 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 NYAP2Q9P242 653 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 BRPF3Q9ULD4 1205 aa12.02□□□□□ -0.49
LINC00598-216ENST00000638163 HPS5Q9UPZ3 1129 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms