RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 SPATA32Q96LK8 384 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 PSMD1Q99460 953 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 SLC26A6Q9BXS9 759 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 TRIM34Q9BYJ4 488 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 USP40Q9NVE5 1235 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 RBM27Q9P2N5 1060 aaKnown RBP7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 SWAP70Q9UH65 585 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 MKRN1Q9UHC7 482 aaKnown RBP7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 SAP30BPQ9UHR5 308 aaKnown RBP7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 SERPINA10Q9UK55 444 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 HDAC9Q9UKV0 1011 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 TAOK2Q9UL54 1235 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 ELP1O95163 1332 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 EP400Q96L91 3159 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 RXRAP19793 462 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 CDC27P30260 824 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 ADD1P35611 737 aaKnown RBP7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 GNAQP50148 359 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 SCNN1DP51172 638 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 RHBDL3P58872 404 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 GUCY1B3Q02153 619 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 SLC4A8Q2Y0W8 1093 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 DALRD3Q5D0E6 543 aaKnown RBP7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 FAM47AQ5JRC9 791 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 DACT2Q5SW24 774 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 CAVIN1Q6NZI2 390 aaKnown RBP7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 C16orf86Q6ZW13 317 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 KIAA0825Q8IV33 1275 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 NIM1KQ8IY84 436 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 LARGE2Q8N3Y3 721 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 CERS5Q8N5B7 392 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 FBXO18Q8NFZ0 1043 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 ZDHHC15Q96MV8 337 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 MAP3K14Q99558 947 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 MYL10Q9BUA6 226 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 RNF26Q9BY78 433 aaPredicted RBP7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 PDGFDQ9GZP0 370 aaPredicted RBP7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 DHX36Q9H2U1 1008 aaKnown RBP7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 BRMS1Q9HCU9 246 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 TCP11L1Q9NUJ3 509 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 TMOD2Q9NZR1 351 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 TACC3Q9Y6A5 838 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 ZNF646O15015 1829 aaPredicted RBP7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 MYH6P13533 1939 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 ADAMTSL1Q8N6G6 1762 aa7.31□□□□□ -1.24
CACNA1D-227ENST00000637844 SNED1Q8TER0 1413 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 DTNBO60941 627 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 FDPSP14324 419 aaKnown RBP7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 CDK8P49336 464 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 SF3A1Q15459 793 aaKnown RBP7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 KLHL34Q8N239 644 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 CRACR2BQ8N4Y2 399 aaPredicted RBP7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 OGFOD1Q8N543 542 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 GPT2Q8TD30 523 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 PHKBQ93100 1093 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 DYNLL2Q96FJ2 89 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 LZTS2Q9BRK4 669 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 MXD3Q9BW11 206 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 SENP2Q9HC62 589 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 GDPD2Q9HCC8 539 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 PPP1R1BQ9UD71 204 aaPredicted RBP7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 ATF5Q9Y2D1 282 aaPredicted RBP7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 CD2APQ9Y5K6 639 aa7.3□□□□□ -1.24
CACNA1D-227ENST00000637844 PRPF3O43395 683 aaKnown RBP7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 PPFIA3O75145 1194 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 NPM3O75607 178 aaKnown RBP7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 MMP14P50281 582 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 PLCD1P51178 756 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 R3HDM1Q15032 1099 aaKnown RBP7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 NTRK3Q16288 839 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 CCDC183Q5T5S1 534 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 KRT40Q6A162 431 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 CDC42EP5Q6NZY7 148 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 RSBN1LQ6PCB5 846 aaPredicted RBP7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 ZSCAN29Q8IWY8 852 aaPredicted RBP7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 PNMA1Q8ND90 353 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 NEDD1Q8NHV4 660 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 NKX2-3Q8TAU0 364 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 BICD2Q8TD16 824 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 LEO1Q8WVC0 666 aaPredicted RBP7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 JDP2Q8WYK2 163 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 ANKS1AQ92625 1134 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 OSBPL5Q9H0X9 879 aaPredicted RBP7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 EHD4Q9H223 541 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 SERPINB13Q9UIV8 391 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 ZNRF3Q9ULT6 936 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 STX8Q9UNK0 236 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 BRCA1P38398 1863 aaKnown RBP7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 TCHHQ07283 1943 aa7.29□□□□□ -1.24
CACNA1D-227ENST00000637844 MYO1BO43795 1136 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 GADD45BO75293 160 aaPredicted RBP7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 WDHD1O75717 1129 aaPredicted RBP7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 TOP1P11387 765 aaKnown RBP7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 RASA1P20936 1047 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 KCNA3P22001 575 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 MRE11P49959 708 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 ZNF445P59923 1031 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 KIF23Q02241 960 aaPredicted RBP7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 TROAPQ12815 778 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 STK38Q15208 465 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms