RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 ZKSCAN4Q969J2 545 aaPredicted RBP26.55■■□□□ 1.84
CHRNA7-231ENST00000637786 SNCAIPQ9Y6H5 919 aa26.55■■□□□ 1.84
CHRNA7-231ENST00000637786 ASNSP08243 561 aa26.54■■□□□ 1.84
CHRNA7-231ENST00000637786 RASA1P20936 1047 aa26.54■■□□□ 1.84
CHRNA7-231ENST00000637786 RNF20Q5VTR2 975 aa26.54■■□□□ 1.84
CHRNA7-231ENST00000637786 MFSD6Q6ZSS7 791 aa26.54■■□□□ 1.84
CHRNA7-231ENST00000637786 TBC1D10CQ8IV04 446 aa26.54■■□□□ 1.84
CHRNA7-231ENST00000637786 RASSF10A6NK89 507 aa26.53■■□□□ 1.84
CHRNA7-231ENST00000637786 ABCB5Q2M3G0 1257 aa26.53■■□□□ 1.84
CHRNA7-231ENST00000637786 SLC10A4Q96EP9 437 aa26.53■■□□□ 1.84
CHRNA7-231ENST00000637786 CLMNQ96JQ2 1002 aa26.53■■□□□ 1.84
CHRNA7-231ENST00000637786 CREB3L3Q68CJ9 461 aa26.52■■□□□ 1.84
CHRNA7-231ENST00000637786 RGMBQ6NW40 437 aa26.52■■□□□ 1.84
CHRNA7-231ENST00000637786 ZNF444Q8N0Y2 327 aaPredicted RBP26.52■■□□□ 1.84
CHRNA7-231ENST00000637786 STK11IPQ8N1F8 1099 aa26.52■■□□□ 1.84
CHRNA7-231ENST00000637786 USP26Q9BXU7 913 aa26.52■■□□□ 1.84
CHRNA7-231ENST00000637786 GREB1LQ9C091 1923 aaPredicted RBP26.52■■□□□ 1.84
CHRNA7-231ENST00000637786 CABP5Q9NP86 173 aa26.52■■□□□ 1.84
CHRNA7-231ENST00000637786 PICK1Q9NRD5 415 aa26.52■■□□□ 1.84
CHRNA7-231ENST00000637786 ZBTB21Q9ULJ3 1066 aa26.52■■□□□ 1.84
CHRNA7-231ENST00000637786 TACC3Q9Y6A5 838 aa26.52■■□□□ 1.84
CHRNA7-231ENST00000637786 SLC27A2O14975 620 aa26.51■■□□□ 1.83
CHRNA7-231ENST00000637786 GDF11O95390 407 aa26.51■■□□□ 1.83
CHRNA7-231ENST00000637786 HSPA4P34932 840 aa26.51■■□□□ 1.83
CHRNA7-231ENST00000637786 TMEM179Q6ZVK1 233 aa26.51■■□□□ 1.83
CHRNA7-231ENST00000637786 ERO1BQ86YB8 467 aa26.51■■□□□ 1.83
CHRNA7-231ENST00000637786 TBC1D2Q9BYX2 928 aa26.51■■□□□ 1.83
CHRNA7-231ENST00000637786 CNNM2Q9H8M5 875 aa26.51■■□□□ 1.83
CHRNA7-231ENST00000637786 PLIN4Q96Q06 1357 aa26.5■■□□□ 1.83
CHRNA7-231ENST00000637786 SPDYE5A6NIY4 337 aa26.5■■□□□ 1.83
CHRNA7-231ENST00000637786 PRDM1O75626 825 aa26.5■■□□□ 1.83
CHRNA7-231ENST00000637786 GH2P01242 217 aa26.5■■□□□ 1.83
CHRNA7-231ENST00000637786 AKR1B1P15121 316 aa26.5■■□□□ 1.83
CHRNA7-231ENST00000637786 PTPRAP18433 802 aa26.5■■□□□ 1.83
CHRNA7-231ENST00000637786 TSGA10IPQ3SY00 556 aa26.5■■□□□ 1.83
CHRNA7-231ENST00000637786 KCNB2Q92953 911 aa26.5■■□□□ 1.83
CHRNA7-231ENST00000637786 ELP3Q9H9T3 547 aa26.5■■□□□ 1.83
CHRNA7-231ENST00000637786 PHIPQ8WWQ0 1821 aa26.5■■□□□ 1.83
CHRNA7-231ENST00000637786 ZNF157P51786 506 aaPredicted RBP26.49■■□□□ 1.83
CHRNA7-231ENST00000637786 JAG1P78504 1218 aa26.49■■□□□ 1.83
CHRNA7-231ENST00000637786 PPATQ06203 517 aa26.49■■□□□ 1.83
CHRNA7-231ENST00000637786 DEFB115Q30KQ5 88 aa26.49■■□□□ 1.83
CHRNA7-231ENST00000637786 CCDC102AQ96A19 550 aa26.49■■□□□ 1.83
CHRNA7-231ENST00000637786 KRT23Q9C075 422 aa26.49■■□□□ 1.83
CHRNA7-231ENST00000637786 INCENPQ9NQS7 918 aa26.49■■□□□ 1.83
CHRNA7-231ENST00000637786 NEDD4P46934 1319 aa26.48■■□□□ 1.83
CHRNA7-231ENST00000637786 ZKSCAN1P17029 563 aaPredicted RBP26.48■■□□□ 1.83
CHRNA7-231ENST00000637786 NEDD1Q8NHV4 660 aa26.48■■□□□ 1.83
CHRNA7-231ENST00000637786 ESR2Q92731 530 aa26.48■■□□□ 1.83
CHRNA7-231ENST00000637786 USP17L5A8MUK1 530 aa26.47■■□□□ 1.83
CHRNA7-231ENST00000637786 E7EWF7 191 aa26.47■■□□□ 1.83
CHRNA7-231ENST00000637786 MPHOSPH10O00566 681 aaKnown RBP26.47■■□□□ 1.83
CHRNA7-231ENST00000637786 TSPY3P0CV98 308 aa26.47■■□□□ 1.83
CHRNA7-231ENST00000637786 TSPY8P0CW00 308 aa26.47■■□□□ 1.83
CHRNA7-231ENST00000637786 ZBTB48P10074 688 aaPredicted RBP26.47■■□□□ 1.83
CHRNA7-231ENST00000637786 MCCP23508 829 aa26.47■■□□□ 1.83
CHRNA7-231ENST00000637786 TRDNQ13061 729 aa26.47■■□□□ 1.83
CHRNA7-231ENST00000637786 TOMM22Q9NS69 142 aa26.47■■□□□ 1.83
CHRNA7-231ENST00000637786 RANBP6O60518 1105 aaKnown RBP26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 SEC24BO95487 1268 aa26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 SLC10A3P09131 477 aa26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 GUCY1A2P33402 732 aa26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 TFAP4Q01664 338 aa26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 PPIL2Q13356 520 aa26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 SHROOM1Q2M3G4 852 aaPredicted RBP26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 RASAL3Q86YV0 1011 aa26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 OPTNQ96CV9 577 aa26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 WNK4Q96J92 1243 aa26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 TAF6LQ9Y6J9 622 aa26.46■■□□□ 1.83
CHRNA7-231ENST00000637786 TSPY2A6NKD2 308 aa26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 ECE1P42892 770 aa26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 KRT32Q14532 448 aa26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 RRP12Q5JTH9 1297 aaKnown RBP26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 SPRYD7Q5W111 196 aa26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 NCOA7Q8NI08 942 aa26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 WDR18Q9BV38 432 aa26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 KANSL2Q9H9L4 492 aa26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 AS3MTQ9HBK9 375 aa26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 ZHX2Q9Y6X8 837 aa26.45■■□□□ 1.82
CHRNA7-231ENST00000637786 IGKV6D-41A0A0C4DH26 115 aa26.44■■□□□ 1.82
CHRNA7-231ENST00000637786 SEPT2Q15019 361 aa26.44■■□□□ 1.82
CHRNA7-231ENST00000637786 RAB3GAP1Q15042 981 aa26.44■■□□□ 1.82
CHRNA7-231ENST00000637786 FAM47AQ5JRC9 791 aa26.44■■□□□ 1.82
CHRNA7-231ENST00000637786 PPP4R3BQ5MIZ7 849 aa26.44■■□□□ 1.82
CHRNA7-231ENST00000637786 STOX1Q6ZVD7 989 aa26.44■■□□□ 1.82
CHRNA7-231ENST00000637786 OTUD5Q96G74 571 aa26.44■■□□□ 1.82
CHRNA7-231ENST00000637786 AFG3L2Q9Y4W6 797 aa26.44■■□□□ 1.82
CHRNA7-231ENST00000637786 FAM155AB1AL88 458 aaPredicted RBP26.43■■□□□ 1.82
CHRNA7-231ENST00000637786 B4E1Z4 1266 aa26.43■■□□□ 1.82
CHRNA7-231ENST00000637786 RALYLQ86SE5 291 aaKnown RBP26.43■■□□□ 1.82
CHRNA7-231ENST00000637786 RASEFQ8IZ41 740 aa26.43■■□□□ 1.82
CHRNA7-231ENST00000637786 CNKSR2Q8WXI2 1034 aa26.43■■□□□ 1.82
CHRNA7-231ENST00000637786 TCP11L1Q9NUJ3 509 aa26.43■■□□□ 1.82
CHRNA7-231ENST00000637786 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.43■■□□□ 1.82
CHRNA7-231ENST00000637786 PTPRFP10586 1907 aa26.43■■□□□ 1.82
CHRNA7-231ENST00000637786 KDM4AO75164 1064 aa26.42■■□□□ 1.82
CHRNA7-231ENST00000637786 GJA5P36382 358 aa26.42■■□□□ 1.82
CHRNA7-231ENST00000637786 HTRA3P83110 453 aa26.42■■□□□ 1.82
CHRNA7-231ENST00000637786 ZNF280CQ8ND82 737 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms