RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 CATIPQ7Z7H3 387 aa25.2■■□□□ 1.62
CHRNA7-228ENST00000637519 GRPEL1Q9HAV7 217 aa25.2■■□□□ 1.62
CHRNA7-228ENST00000637519 IL17RBQ9NRM6 502 aa25.2■■□□□ 1.62
CHRNA7-228ENST00000637519 SUGT1Q9Y2Z0 365 aa25.2■■□□□ 1.62
CHRNA7-228ENST00000637519 TROAPQ12815 778 aa25.19■■□□□ 1.62
CHRNA7-228ENST00000637519 RCSD1Q6JBY9 416 aa25.19■■□□□ 1.62
CHRNA7-228ENST00000637519 DDX4Q9NQI0 724 aaKnown RBP25.19■■□□□ 1.62
CHRNA7-228ENST00000637519 hCG_1642624A0A1W2PR95 340 aa25.19■■□□□ 1.62
CHRNA7-228ENST00000637519 PLEKHA8P1O95397 391 aa25.19■■□□□ 1.62
CHRNA7-228ENST00000637519 KIF23Q02241 960 aaPredicted RBP25.19■■□□□ 1.62
CHRNA7-228ENST00000637519 CERS3Q8IU89 383 aa25.19■■□□□ 1.62
CHRNA7-228ENST00000637519 PGBD1Q96JS3 809 aa25.19■■□□□ 1.62
CHRNA7-228ENST00000637519 STK36Q9NRP7 1315 aa25.18■■□□□ 1.62
CHRNA7-228ENST00000637519 L1TD1Q5T7N2 865 aaKnown RBP25.18■■□□□ 1.62
CHRNA7-228ENST00000637519 CRACR2BQ8N4Y2 399 aaPredicted RBP25.18■■□□□ 1.62
CHRNA7-228ENST00000637519 KCNA3P22001 575 aa25.17■■□□□ 1.62
CHRNA7-228ENST00000637519 WDHD1O75717 1129 aaPredicted RBP25.17■■□□□ 1.62
CHRNA7-228ENST00000637519 LIG1P18858 919 aa25.17■■□□□ 1.62
CHRNA7-228ENST00000637519 RASA1P20936 1047 aa25.17■■□□□ 1.62
CHRNA7-228ENST00000637519 RCAN1P53805 252 aa25.17■■□□□ 1.62
CHRNA7-228ENST00000637519 DACT2Q5SW24 774 aa25.17■■□□□ 1.62
CHRNA7-228ENST00000637519 TTLL6Q8N841 843 aa25.17■■□□□ 1.62
CHRNA7-228ENST00000637519 PPIP5K2O43314 1243 aa25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 CDK8P49336 464 aa25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 KIAA2012Q0VF49 1180 aa25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 USP40Q9NVE5 1235 aa25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 CFAP45Q9UL16 551 aa25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 ATF5Q9Y2D1 282 aaPredicted RBP25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 CCDC196A0A1B0GTZ2 297 aa25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 TSPY3P0CV98 308 aa25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 TSPY8P0CW00 308 aa25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 APOBEC3HQ6NTF7 200 aaKnown RBP25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 TEKT1Q969V4 418 aa25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 SYAP1Q96A49 352 aaPredicted RBP25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 ZNF646O15015 1829 aaPredicted RBP25.16■■□□□ 1.62
CHRNA7-228ENST00000637519 MYH1P12882 1939 aa25.15■■□□□ 1.62
CHRNA7-228ENST00000637519 YDJCA8MPS7 323 aa25.15■■□□□ 1.62
CHRNA7-228ENST00000637519 CRKP46108 304 aa25.15■■□□□ 1.62
CHRNA7-228ENST00000637519 STRIP1Q5VSL9 837 aa25.15■■□□□ 1.62
CHRNA7-228ENST00000637519 CDC42EP5Q6NZY7 148 aa25.15■■□□□ 1.62
CHRNA7-228ENST00000637519 C16orf86Q6ZW13 317 aa25.15■■□□□ 1.62
CHRNA7-228ENST00000637519 TRIM22Q8IYM9 498 aa25.15■■□□□ 1.62
CHRNA7-228ENST00000637519 KCNJ14Q9UNX9 436 aa25.15■■□□□ 1.62
CHRNA7-228ENST00000637519 FOCADQ5VW36 1801 aa25.15■■□□□ 1.62
CHRNA7-228ENST00000637519 DDAH1O94760 285 aa25.14■■□□□ 1.62
CHRNA7-228ENST00000637519 MRE11P49959 708 aa25.14■■□□□ 1.62
CHRNA7-228ENST00000637519 CACNB3P54284 484 aa25.14■■□□□ 1.62
CHRNA7-228ENST00000637519 ZNF444Q8N0Y2 327 aaPredicted RBP25.14■■□□□ 1.62
CHRNA7-228ENST00000637519 SLC16A10Q8TF71 515 aa25.14■■□□□ 1.62
CHRNA7-228ENST00000637519 FUT2Q10981 343 aa25.14■■□□□ 1.61
CHRNA7-228ENST00000637519 NFIAQ12857 509 aa25.14■■□□□ 1.61
CHRNA7-228ENST00000637519 CCDC183Q5T5S1 534 aa25.14■■□□□ 1.61
CHRNA7-228ENST00000637519 MYSM1Q5VVJ2 828 aa25.14■■□□□ 1.61
CHRNA7-228ENST00000637519 ZNF396Q96N95 335 aaPredicted RBP25.14■■□□□ 1.61
CHRNA7-228ENST00000637519 MTMR7Q9Y216 660 aa25.14■■□□□ 1.61
CHRNA7-228ENST00000637519 CLIC4Q9Y696 253 aa25.14■■□□□ 1.61
CHRNA7-228ENST00000637519 GOLGA6L4A6NEF3 574 aa25.13■■□□□ 1.61
CHRNA7-228ENST00000637519 SLURP2P0DP57 97 aa25.13■■□□□ 1.61
CHRNA7-228ENST00000637519 TRIM29Q14134 588 aa25.13■■□□□ 1.61
CHRNA7-228ENST00000637519 LRSAM1Q6UWE0 723 aa25.13■■□□□ 1.61
CHRNA7-228ENST00000637519 SHISA4Q96DD7 197 aa25.13■■□□□ 1.61
CHRNA7-228ENST00000637519 HHIPL2Q6UWX4 724 aa25.13■■□□□ 1.61
CHRNA7-228ENST00000637519 BICD2Q8TD16 824 aa25.13■■□□□ 1.61
CHRNA7-228ENST00000637519 DEXIO95424 95 aa25.12■■□□□ 1.61
CHRNA7-228ENST00000637519 RBM5P52756 815 aaKnown RBP eCLIP25.12■■□□□ 1.61
CHRNA7-228ENST00000637519 RASGRP2Q7LDG7 609 aa25.12■■□□□ 1.61
CHRNA7-228ENST00000637519 ZNF277Q9NRM2 450 aaPredicted RBP25.12■■□□□ 1.61
CHRNA7-228ENST00000637519 CCDC93Q567U6 631 aa25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 RBSNQ9H1K0 784 aa25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 KAT14Q9H8E8 782 aa25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 RCOR1Q9UKL0 485 aa25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 ISY1Q9ULR0 285 aaKnown RBP25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 STX8Q9UNK0 236 aa25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 COL4A5P29400 1685 aa25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 GNL2Q13823 731 aaKnown RBP25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 CC2D2BQ6DHV5 1058 aa25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 TMTC3Q6ZXV5 915 aa25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 BRAPQ7Z569 592 aa25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 SRBD1Q8N5C6 995 aaKnown RBP25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 PIBF1Q8WXW3 757 aa25.11■■□□□ 1.61
CHRNA7-228ENST00000637519 CALM1P0DP23 149 aa25.1■■□□□ 1.61
CHRNA7-228ENST00000637519 CALM2P0DP24 149 aa25.1■■□□□ 1.61
CHRNA7-228ENST00000637519 CALM3P0DP25 149 aa25.1■■□□□ 1.61
CHRNA7-228ENST00000637519 PKN1Q16512 942 aa25.1■■□□□ 1.61
CHRNA7-228ENST00000637519 ZFPM1Q8IX07 1006 aa25.1■■□□□ 1.61
CHRNA7-228ENST00000637519 PNMA1Q8ND90 353 aa25.1■■□□□ 1.61
CHRNA7-228ENST00000637519 CTCFLQ8NI51 663 aaPredicted RBP25.1■■□□□ 1.61
CHRNA7-228ENST00000637519 RBM28Q9NW13 759 aaKnown RBP25.1■■□□□ 1.61
CHRNA7-228ENST00000637519 V9GY48 417 aaPredicted RBP25.1■■□□□ 1.61
CHRNA7-228ENST00000637519 WASF1Q92558 559 aa25.09■■□□□ 1.61
CHRNA7-228ENST00000637519 RNF26Q9BY78 433 aaPredicted RBP25.09■■□□□ 1.61
CHRNA7-228ENST00000637519 VPS54Q9P1Q0 977 aa25.09■■□□□ 1.61
CHRNA7-228ENST00000637519 CNTNAP5Q8WYK1 1306 aa25.09■■□□□ 1.61
CHRNA7-228ENST00000637519 MMP1P03956 469 aa25.09■■□□□ 1.61
CHRNA7-228ENST00000637519 DGKHQ86XP1 1220 aa25.09■■□□□ 1.61
CHRNA7-228ENST00000637519 SUPT20HQ8NEM7 779 aa25.09■■□□□ 1.61
CHRNA7-228ENST00000637519 ZDHHC15Q96MV8 337 aa25.09■■□□□ 1.61
CHRNA7-228ENST00000637519 OSBPL5Q9H0X9 879 aaPredicted RBP25.09■■□□□ 1.61
CHRNA7-228ENST00000637519 DACT1Q9NYF0 836 aa25.09■■□□□ 1.61
CHRNA7-228ENST00000637519 BTBD18B2RXH4 712 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms