RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 MED15Q96RN5 788 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 PNKPQ96T60 521 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 NAPGQ99747 312 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 ABCB6Q9NP58 842 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 ADD3Q9UEY8 706 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 RSPH14Q9UHP6 348 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 BTBD18B2RXH4 712 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 CYP27B1O15528 508 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 MST1RQ04912 1400 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 KRT28Q7Z3Y7 464 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 TMTC1Q8IUR5 882 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 WWC3Q9ULE0 1092 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 NID2Q14112 1375 aa16.82■□□□□ 0.28
CACNA1A-220ENST00000635988 RGPD5Q99666 1765 aa16.82■□□□□ 0.28
CACNA1A-220ENST00000635988 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
CACNA1A-220ENST00000635988 TULP1O00294 542 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-220ENST00000635988 TEX33O43247 280 aa16.82■□□□□ 0.28
CACNA1A-220ENST00000635988 TAF7LQ5H9L4 462 aa16.82■□□□□ 0.28
CACNA1A-220ENST00000635988 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-220ENST00000635988 SYNRGQ9UMZ2 1314 aa16.82■□□□□ 0.28
CACNA1A-220ENST00000635988 MYH7P12883 1935 aa16.82■□□□□ 0.28
CACNA1A-220ENST00000635988 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-220ENST00000635988 CASP8Q14790 479 aa16.81■□□□□ 0.28
CACNA1A-220ENST00000635988 ALX1Q15699 326 aa16.81■□□□□ 0.28
CACNA1A-220ENST00000635988 CDKAL1Q5VV42 579 aa16.81■□□□□ 0.28
CACNA1A-220ENST00000635988 ANKLE2Q86XL3 938 aa16.81■□□□□ 0.28
CACNA1A-220ENST00000635988 LCMT1Q9UIC8 334 aa16.81■□□□□ 0.28
CACNA1A-220ENST00000635988 TAOK2Q9UL54 1235 aa16.81■□□□□ 0.28
CACNA1A-220ENST00000635988 CNNM2Q9H8M5 875 aa16.81■□□□□ 0.28
CACNA1A-220ENST00000635988 GLI3P10071 1580 aa16.81■□□□□ 0.28
CACNA1A-220ENST00000635988 TRPM3Q9HCF6 1732 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-220ENST00000635988 MCM3P25205 808 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 WDR93Q6P2C0 686 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 SLC35F6Q8N357 371 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 SENP2Q9HC62 589 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 DENND2AQ9ULE3 1009 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 FER1L4A9Z1Z3 1794 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 ECM29Q5VYK3 1845 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 IFIT3O14879 490 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 TRIM66O15016 1216 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 GRIN1Q05586 938 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 CPLX3Q8WVH0 158 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 ZBTB3Q9H5J0 574 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 VIPAS39Q9H9C1 493 aa16.8■□□□□ 0.28
CACNA1A-220ENST00000635988 CCDC196A0A1B0GTZ2 297 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 DEXIO95424 95 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 VSNL1P62760 191 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 CUL4BQ13620 913 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 TRIM14Q14142 442 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 CTCFLQ8NI51 663 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 CCDC102AQ96A19 550 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 GSDMAQ96QA5 445 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 AATFQ9NY61 560 aaKnown RBP eCLIP16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 CSB-PGBD3P0DP91 1061 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 CASP14P31944 242 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 MCAMP43121 646 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 IFIT5Q13325 482 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 GRAMD1CQ8IYS0 662 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 ISCA1Q9BUE6 129 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 PLA2G12BQ9BX93 195 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 KRT23Q9C075 422 aa16.79■□□□□ 0.28
CACNA1A-220ENST00000635988 RHOXF2BP0C7M4 288 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 PI16Q6UXB8 463 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 CYP26C1Q6V0L0 522 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 RHOXF2Q9BQY4 288 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 MYL10Q9BUA6 226 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 STRN4Q9NRL3 753 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 PCDHB6Q9Y5E3 794 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 MAGEA9P43362 315 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 RCAN1P53805 252 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 SART3Q15020 963 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 MTA3Q9BTC8 594 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 CSRNP2Q9H175 543 aa16.78■□□□□ 0.28
CACNA1A-220ENST00000635988 BMP15O95972 392 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 GYPCP04921 128 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 SPAG1Q07617 926 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 TRIM28Q13263 835 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 RTN1Q16799 776 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 MAP9Q49MG5 647 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 NKX2-3Q8TAU0 364 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 MYO6Q9UM54 1294 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 N4BP1O75113 896 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 CSF1RP07333 972 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 METTL24Q5JXM2 366 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 SH3RF1Q7Z6J0 888 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 TMTC2Q8N394 836 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 AIDAQ96BJ3 306 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 ZSWIM5Q9P217 1185 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 KCNJ14Q9UNX9 436 aa16.77■□□□□ 0.28
CACNA1A-220ENST00000635988 PKD1L3Q7Z443 1732 aa16.77■□□□□ 0.27
CACNA1A-220ENST00000635988 IDH1O75874 414 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 PCCAP05165 728 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 TCIRG1Q13488 830 aa16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 KLHL10Q6JEL2 608 aa16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 ANKRD20A12PQ8NF67 263 aa16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 STRBPQ96SI9 672 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 ZNF532Q9HCE3 1301 aa16.76■□□□□ 0.27
CACNA1A-220ENST00000635988 A0A0U1RQJ8 604 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms