RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 ELNP15502 786 aa10.36□□□□□ -0.75
SMARCA2-239ENST00000635388 ATF4P18848 351 aaPredicted RBP10.36□□□□□ -0.75
SMARCA2-239ENST00000635388 HSPA2P54652 639 aa10.36□□□□□ -0.75
SMARCA2-239ENST00000635388 GNL2Q13823 731 aaKnown RBP10.36□□□□□ -0.75
SMARCA2-239ENST00000635388 KIF4BQ2VIQ3 1234 aa10.36□□□□□ -0.75
SMARCA2-239ENST00000635388 GGT6Q6P531 493 aa10.36□□□□□ -0.75
SMARCA2-239ENST00000635388 CFAP65Q6ZU64 1925 aaKnown RBP10.36□□□□□ -0.75
SMARCA2-239ENST00000635388 STRCQ7RTU9 1775 aa10.36□□□□□ -0.75
SMARCA2-239ENST00000635388 DAPK1P53355 1430 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 NPATQ14207 1427 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 DUOX2Q9NRD8 1548 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 SPDYE3A6NKU9 549 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 PIK3R2O00459 728 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 FGRP09769 529 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 LMNB1P20700 586 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 CDK8P49336 464 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 MPP2Q14168 576 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 SLITRK4Q8IW52 837 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 JARID2Q92833 1246 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 WDR18Q9BV38 432 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 ROBO2Q9HCK4 1378 aa10.35□□□□□ -0.75
SMARCA2-239ENST00000635388 MROH1Q8NDA8 1641 aa10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 KIF3BO15066 747 aa10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 LIG1P18858 919 aa10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 COL8A1P27658 744 aa10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 INSM1Q01101 510 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 RPL6Q02878 288 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 TRIM28Q13263 835 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 PDE3AQ14432 1141 aa10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 KIAA1211Q6ZU35 1233 aa10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 TMPRSS13Q9BYE2 586 aa10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 NOP53Q9NZM5 478 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 ZMYM3Q14202 1370 aa10.34□□□□□ -0.75
SMARCA2-239ENST00000635388 ABCC5O15440 1437 aa10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 TLR3O15455 904 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 DNAJA1P31689 397 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 SOX9P48436 509 aa10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 APOBRQ0VD83 1088 aa10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 DUOXA2Q1HG44 320 aa10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 IGF2-ASQ6U949 168 aa10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 PODNQ7Z5L7 613 aa10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 BEND7Q8N7W2 519 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 SPATA32Q96LK8 384 aa10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 GINM1Q9NU53 330 aa10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 SYNGAP1Q96PV0 1343 aa10.33□□□□□ -0.76
SMARCA2-239ENST00000635388 CEP170BQ9Y4F5 1589 aaPredicted RBP10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 KIF15Q9NS87 1388 aa10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 ARID5AQ03989 594 aa10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 SF3A1Q15459 793 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 SHISA2Q6UWI4 295 aa10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 REC114Q7Z4M0 266 aa10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 MCF2L2Q86YR7 1114 aa10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 PRKAG2Q9UGJ0 569 aa10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 PCDHA4Q9UN74 947 aa10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 DEPDC5O75140 1603 aa10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 CAMSAP1Q5T5Y3 1602 aa10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 PTPRKQ15262 1439 aa10.32□□□□□ -0.76
SMARCA2-239ENST00000635388 PZPP20742 1482 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 GFRA2O00451 464 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 AOC2O75106 756 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 INPP5AQ14642 412 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 HP1BP3Q5SSJ5 553 aaPredicted RBP10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 LRFN4Q6PJG9 635 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 ACAD11Q709F0 780 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 NKD1Q969G9 470 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 ACSBG1Q96GR2 724 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 SEC16BQ96JE7 1060 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 MRPL18Q9H0U6 180 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 EFR3BQ9Y2G0 817 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 POLR3KQ9Y2Y1 108 aaPredicted RBP10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 ABCC3O15438 1527 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 PRDM15P57071 1507 aaPredicted RBP10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 ERBINQ96RT1 1412 aa10.31□□□□□ -0.76
SMARCA2-239ENST00000635388 MEGF11A6BM72 1044 aa10.3□□□□□ -0.76
SMARCA2-239ENST00000635388 SPATA31C1P0DKV0 1188 aa10.3□□□□□ -0.76
SMARCA2-239ENST00000635388 GRIK4Q16099 956 aa10.3□□□□□ -0.76
SMARCA2-239ENST00000635388 SEZ6Q53EL9 994 aa10.3□□□□□ -0.76
SMARCA2-239ENST00000635388 PRRT3Q5FWE3 981 aa10.3□□□□□ -0.76
SMARCA2-239ENST00000635388 EXOSC6Q5RKV6 272 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-239ENST00000635388 PLPPR2Q96GM1 343 aa10.3□□□□□ -0.76
SMARCA2-239ENST00000635388 RUSC1Q9BVN2 902 aa10.3□□□□□ -0.76
SMARCA2-239ENST00000635388 TANGO6Q9C0B7 1094 aa10.3□□□□□ -0.76
SMARCA2-239ENST00000635388 NASPP49321 788 aaPredicted RBP10.29□□□□□ -0.76
SMARCA2-239ENST00000635388 COL9A2Q14055 689 aaPredicted RBP10.29□□□□□ -0.76
SMARCA2-239ENST00000635388 ZC3H12AQ5D1E8 599 aaKnown RBP10.29□□□□□ -0.76
SMARCA2-239ENST00000635388 WIPI1Q5MNZ9 446 aaPredicted RBP10.29□□□□□ -0.76
SMARCA2-239ENST00000635388 DRC1Q96MC2 740 aa10.29□□□□□ -0.76
SMARCA2-239ENST00000635388 SUGCTQ9HAC7 445 aa10.29□□□□□ -0.76
SMARCA2-239ENST00000635388 POLR1AO95602 1720 aaPredicted RBP10.29□□□□□ -0.76
SMARCA2-239ENST00000635388 ADGRL2O95490 1459 aa10.29□□□□□ -0.76
SMARCA2-239ENST00000635388 TMPRSS2O15393 492 aa10.28□□□□□ -0.76
SMARCA2-239ENST00000635388 RING1Q06587 406 aa10.28□□□□□ -0.76
SMARCA2-239ENST00000635388 FAM50AQ14320 339 aaKnown RBP10.28□□□□□ -0.76
SMARCA2-239ENST00000635388 CWF19L2Q2TBE0 894 aaKnown RBP10.28□□□□□ -0.76
SMARCA2-239ENST00000635388 TMEM130Q8N3G9 435 aa10.28□□□□□ -0.76
SMARCA2-239ENST00000635388 SCARF2Q96GP6 870 aaPredicted RBP10.28□□□□□ -0.76
SMARCA2-239ENST00000635388 RNF208Q9H0X6 261 aa10.28□□□□□ -0.76
SMARCA2-239ENST00000635388 BRMS1Q9HCU9 246 aa10.28□□□□□ -0.76
SMARCA2-239ENST00000635388 WASHC2CQ9Y4E1 1318 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms