RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 NLGN1Q8N2Q7 840 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 TDRD7Q8NHU6 1098 aaKnown RBP8.29□□□□□ -1.08
BRCA1-230ENST00000634433 NOL10Q9BSC4 688 aaKnown RBP8.29□□□□□ -1.08
BRCA1-230ENST00000634433 GGA1Q9UJY5 639 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 COL4A1P02462 1669 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 STK36Q9NRP7 1315 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 COL1A1P02452 1464 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-230ENST00000634433 NID2Q14112 1375 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 WTIPA6NIX2 430 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-230ENST00000634433 BAG3O95817 575 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 HSPA6P17066 643 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 DYNLL1P63167 89 aaKnown RBP8.29□□□□□ -1.08
BRCA1-230ENST00000634433 ADGRA1Q86SQ6 560 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 IQCA1Q86XH1 822 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 TRIM22Q8IYM9 498 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 FAM43AQ8N2R8 423 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 BICD2Q8TD16 824 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 GIPC2Q8TF65 315 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 SDR42E1Q8WUS8 393 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 ALG1Q9BT22 464 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 NUP62CLQ9H1M0 184 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 IRS2Q9Y4H2 1338 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 TAF1P21675 1872 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 UBR3Q6ZT12 1888 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-230ENST00000634433 KLRG2A4D1S0 409 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-230ENST00000634433 FGRP09769 529 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 CCDC192P0DO97 292 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 IFNAR1P17181 557 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 KLRK1P26718 216 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 ADD1P35611 737 aaKnown RBP8.28□□□□□ -1.08
BRCA1-230ENST00000634433 MAP3K11Q16584 847 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 RTN1Q16799 776 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 SBK1Q52WX2 424 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 DNAJC14Q6Y2X3 702 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-230ENST00000634433 MICU3Q86XE3 530 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 SLF2Q8IX21 1173 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 UBXN4Q92575 508 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 RTEL1Q9NZ71 1219 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 ARPP21Q9UBL0 812 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-230ENST00000634433 POLRMTO00411 1230 aaKnown RBP8.28□□□□□ -1.08
BRCA1-230ENST00000634433 CTAGE5O15320 804 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 CALM1P0DP23 149 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 CALM2P0DP24 149 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 CALM3P0DP25 149 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 GUCY1B3Q02153 619 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 LARGE2Q8N3Y3 721 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 KCNG4Q8TDN1 519 aa8.28□□□□□ -1.08
BRCA1-230ENST00000634433 CACNA1SQ13698 1873 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 ORC4O43929 436 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 UFL1O94874 794 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 FMNL1O95466 1100 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-230ENST00000634433 YEATS4O95619 227 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 GPSM2P81274 684 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 PDE4BQ07343 736 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 GNL2Q13823 731 aaKnown RBP8.27□□□□□ -1.09
BRCA1-230ENST00000634433 SAFBQ15424 915 aaKnown RBP eCLIP8.27□□□□□ -1.09
BRCA1-230ENST00000634433 SF3A1Q15459 793 aaKnown RBP8.27□□□□□ -1.09
BRCA1-230ENST00000634433 HS1BP3Q53T59 392 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 CCDC178Q5BJE1 867 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 CTR9Q6PD62 1173 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 CATIPQ7Z7H3 387 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 TBC1D22AQ8WUA7 517 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 TMX4Q9H1E5 349 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-230ENST00000634433 TNMDQ9H2S6 317 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 CLSTN2Q9H4D0 955 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 INCENPQ9NQS7 918 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 AATFQ9NY61 560 aaKnown RBP eCLIP8.27□□□□□ -1.09
BRCA1-230ENST00000634433 USP17L12C9JPN9 530 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 USP17L21D6R901 530 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 LIG1P18858 919 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 PRDX5P30044 214 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 CDC27P30260 824 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 PPP4CP60510 307 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 NTRK3Q16288 839 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 CCDC73Q6ZRK6 1079 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 TXNRD3Q86VQ6 643 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 RAB11FIP4Q86YS3 637 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 SP8Q8IXZ3 490 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 ZNF384Q8TF68 577 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 PGBD1Q96JS3 809 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 ZSCAN10Q96SZ4 725 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-230ENST00000634433 DCP1AQ9NPI6 582 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-230ENST00000634433 POLR3EQ9NVU0 708 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 RBM28Q9NW13 759 aaKnown RBP8.27□□□□□ -1.09
BRCA1-230ENST00000634433 DACT1Q9NYF0 836 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 TACC3Q9Y6A5 838 aa8.27□□□□□ -1.09
BRCA1-230ENST00000634433 CCDC194A0A1B0GVG4 234 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 RANBP6O60518 1105 aaKnown RBP8.26□□□□□ -1.09
BRCA1-230ENST00000634433 CAVIN2O95810 425 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 IL1R1P14778 569 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 PLCG2P16885 1265 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 XBP1P17861 261 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 ALDH1B1P30837 517 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 ME1P48163 572 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 AKAP17AQ02040 695 aaKnown RBP8.26□□□□□ -1.09
BRCA1-230ENST00000634433 KIF23Q02241 960 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-230ENST00000634433 STK38Q15208 465 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 IFIT1BQ5T764 474 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms