RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 CPSF6Q16630 551 aaKnown RBP eCLIP8.19□□□□□ -1.1
LINC00254-202ENST00000633813 HDXQ7Z353 690 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 GAL3ST3Q96A11 431 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 METTL22Q9BUU2 404 aaPredicted RBP8.19□□□□□ -1.1
LINC00254-202ENST00000633813 ATG3Q9NT62 314 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 PRKAG2Q9UGJ0 569 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 PCOLCE2Q9UKZ9 415 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 RNF112Q9ULX5 631 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 CDC42BPAQ5VT25 1732 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 ABCC5O15440 1437 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 DAPK1P53355 1430 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 SETD5Q9C0A6 1442 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 KIAA1107Q9UPP5 1409 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 PLEKHH2Q8IVE3 1493 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 ARHGAP5Q13017 1502 aa8.19□□□□□ -1.1
LINC00254-202ENST00000633813 PREX2Q70Z35 1606 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 ABCA9Q8IUA7 1624 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 FANCGO15287 622 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 ZAR1Q86SH2 424 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 FBXL6Q8N531 539 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 SHKBP1Q8TBC3 707 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 RSRP1Q9BUV0 290 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 CSADQ9Y600 493 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 SNCAIPQ9Y6H5 919 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 ROCK1Q13464 1354 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 CD109Q6YHK3 1445 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 MBD5Q9P267 1494 aa8.18□□□□□ -1.1
LINC00254-202ENST00000633813 WDR64B1ANS9 1081 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 CYP27A1Q02318 531 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 SEPT6Q14141 434 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 PPM1JQ5JR12 505 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 C12orf40Q86WS4 652 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 ZDHHC13Q8IUH4 622 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 TMEM87AQ8NBN3 555 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 KCT2Q8NC54 265 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 PHC3Q8NDX5 983 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 OSBPL1AQ9BXW6 950 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 PCDHB5Q9Y5E4 795 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 HFM1A2PYH4 1435 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 CDC42BPBQ9Y5S2 1711 aa8.17□□□□□ -1.1
LINC00254-202ENST00000633813 TFE3P19532 575 aaPredicted RBP8.16□□□□□ -1.1
LINC00254-202ENST00000633813 DNMT1P26358 1616 aaKnown RBP8.16□□□□□ -1.1
LINC00254-202ENST00000633813 GBP2P32456 591 aaPredicted RBP8.16□□□□□ -1.1
LINC00254-202ENST00000633813 GRIK1P39086 918 aa8.16□□□□□ -1.1
LINC00254-202ENST00000633813 TSNAXIP1Q2TAA8 658 aa8.16□□□□□ -1.1
LINC00254-202ENST00000633813 WIPI1Q5MNZ9 446 aaPredicted RBP8.16□□□□□ -1.1
LINC00254-202ENST00000633813 CDC37L1Q7L3B6 337 aa8.16□□□□□ -1.1
LINC00254-202ENST00000633813 HS2ST1Q7LGA3 356 aa8.16□□□□□ -1.1
LINC00254-202ENST00000633813 AKNAQ7Z591 1439 aa8.16□□□□□ -1.1
LINC00254-202ENST00000633813 CCDC84Q86UT8 332 aaPredicted RBP8.16□□□□□ -1.1
LINC00254-202ENST00000633813 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC00254-202ENST00000633813 ISL2Q96A47 359 aa8.16□□□□□ -1.1
LINC00254-202ENST00000633813 PLPPR2Q96GM1 343 aa8.16□□□□□ -1.1
LINC00254-202ENST00000633813 TMEM74Q96NL1 305 aa8.16□□□□□ -1.1
LINC00254-202ENST00000633813 MYO5CQ9NQX4 1742 aa8.16□□□□□ -1.1
LINC00254-202ENST00000633813 TLR6Q9Y2C9 796 aa8.16□□□□□ -1.1
LINC00254-202ENST00000633813 GLI2P10070 1586 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 FANCAO15360 1455 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 NAIPQ13075 1403 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 NCOA1Q15788 1441 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 RAB3GAP2Q9H2M9 1393 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 SCO2A0A1W2PP80 73 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 PRAMEF27A3QJZ7 478 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 LMNB2Q03252 620 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 PTPN11Q06124 597 aaPredicted RBP8.15□□□□□ -1.1
LINC00254-202ENST00000633813 RING1Q06587 406 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 INPP5AQ14642 412 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 DUSP27Q5VZP5 1158 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 LRFN4Q6PJG9 635 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 SEZ6L2Q6UXD5 910 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 LGR6Q9HBX8 967 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 RRP7BPQ9NSQ0 103 aa8.15□□□□□ -1.1
LINC00254-202ENST00000633813 ARHGEF5Q12774 1597 aa8.14□□□□□ -1.11
LINC00254-202ENST00000633813 SAMD9LQ8IVG5 1584 aa8.14□□□□□ -1.11
LINC00254-202ENST00000633813 ANKRD30AQ9BXX3 1397 aa8.14□□□□□ -1.11
LINC00254-202ENST00000633813 F13BP05160 661 aa8.14□□□□□ -1.11
LINC00254-202ENST00000633813 NEFMP07197 916 aa8.14□□□□□ -1.11
LINC00254-202ENST00000633813 CAMK2GQ13555 558 aaPredicted RBP8.14□□□□□ -1.11
LINC00254-202ENST00000633813 ZBTB37Q5TC79 503 aa8.14□□□□□ -1.11
LINC00254-202ENST00000633813 INTS5Q6P9B9 1019 aaKnown RBP8.14□□□□□ -1.11
LINC00254-202ENST00000633813 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.14□□□□□ -1.11
LINC00254-202ENST00000633813 RGS22Q8NE09 1264 aa8.14□□□□□ -1.11
LINC00254-202ENST00000633813 ZNF507Q8TCN5 953 aa8.14□□□□□ -1.11
LINC00254-202ENST00000633813 C1GALT1Q9NS00 363 aa8.14□□□□□ -1.11
LINC00254-202ENST00000633813 LEMD3Q9Y2U8 911 aa8.14□□□□□ -1.11
LINC00254-202ENST00000633813 CCDC141Q6ZP82 1450 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 SHANK2Q9UPX8 1470 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 DYNC1LI2O43237 492 aaPredicted RBP8.13□□□□□ -1.11
LINC00254-202ENST00000633813 COBLO75128 1261 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 BPNT1O95861 308 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 TGFB1P01137 390 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 VAMP1P23763 118 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 RPL6Q02878 288 aaKnown RBP8.13□□□□□ -1.11
LINC00254-202ENST00000633813 CYP27C1Q4G0S4 372 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 CYFIP1Q7L576 1253 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 JARID2Q92833 1246 aaPredicted RBP8.13□□□□□ -1.11
LINC00254-202ENST00000633813 PIM2Q9P1W9 311 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 GGT7Q9UJ14 662 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 TACC3Q9Y6A5 838 aa8.13□□□□□ -1.11
LINC00254-202ENST00000633813 ADGRL2O95490 1459 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms