RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 SGSM2O43147 1006 aa22.3■■□□□ 1.16
PNKP-224ENST00000631020 TLR2O60603 784 aa22.3■■□□□ 1.16
PNKP-224ENST00000631020 USP5P45974 858 aa22.3■■□□□ 1.16
PNKP-224ENST00000631020 ARHGEF6Q15052 776 aa22.3■■□□□ 1.16
PNKP-224ENST00000631020 RUFY2Q8WXA3 655 aa22.3■■□□□ 1.16
PNKP-224ENST00000631020 DHX36Q9H2U1 1008 aaKnown RBP22.3■■□□□ 1.16
PNKP-224ENST00000631020 DCP1AQ9NPI6 582 aaPredicted RBP22.3■■□□□ 1.16
PNKP-224ENST00000631020 PHIPQ8WWQ0 1821 aa22.3■■□□□ 1.16
PNKP-224ENST00000631020 PATL2C9JE40 543 aaKnown RBP22.29■■□□□ 1.16
PNKP-224ENST00000631020 MLLT1Q03111 559 aaPredicted RBP22.29■■□□□ 1.16
PNKP-224ENST00000631020 ESYT1Q9BSJ8 1104 aa22.29■■□□□ 1.16
PNKP-224ENST00000631020 PTPRFP10586 1907 aa22.29■■□□□ 1.16
PNKP-224ENST00000631020 HTTP42858 3142 aa22.28■■□□□ 1.16
PNKP-224ENST00000631020 PTPRAP18433 802 aa22.28■■□□□ 1.16
PNKP-224ENST00000631020 GNAT2P19087 354 aa22.28■■□□□ 1.16
PNKP-224ENST00000631020 CD99L2Q8TCZ2 262 aa22.28■■□□□ 1.16
PNKP-224ENST00000631020 EPB41L4AQ9HCS5 686 aaPredicted RBP22.28■■□□□ 1.16
PNKP-224ENST00000631020 ATP8A2Q9NTI2 1148 aa22.28■■□□□ 1.16
PNKP-224ENST00000631020 HERC5Q9UII4 1024 aaKnown RBP22.28■■□□□ 1.16
PNKP-224ENST00000631020 RAD50Q92878 1312 aa22.28■■□□□ 1.16
PNKP-224ENST00000631020 MOGSQ13724 837 aa22.27■■□□□ 1.16
PNKP-224ENST00000631020 EFCC1Q9HA90 598 aa22.27■■□□□ 1.16
PNKP-224ENST00000631020 SAP30BPQ9UHR5 308 aaKnown RBP22.27■■□□□ 1.16
PNKP-224ENST00000631020 PALD1Q9ULE6 856 aa22.27■■□□□ 1.16
PNKP-224ENST00000631020 ZHX2Q9Y6X8 837 aa22.27■■□□□ 1.16
PNKP-224ENST00000631020 HSPD1P10809 573 aaKnown RBP22.26■■□□□ 1.15
PNKP-224ENST00000631020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.26■■□□□ 1.15
PNKP-224ENST00000631020 PI4KBQ9UBF8 816 aa22.26■■□□□ 1.15
PNKP-224ENST00000631020 AFG3L2Q9Y4W6 797 aa22.26■■□□□ 1.15
PNKP-224ENST00000631020 ATAD5Q96QE3 1844 aa22.26■■□□□ 1.15
PNKP-224ENST00000631020 A0A0G2JLL6 359 aaPredicted RBP22.26■■□□□ 1.15
PNKP-224ENST00000631020 APPP05067 770 aa22.26■■□□□ 1.15
PNKP-224ENST00000631020 MFAP1P55081 439 aaKnown RBP22.26■■□□□ 1.15
PNKP-224ENST00000631020 FASTKD5Q7L8L6 764 aaKnown RBP22.26■■□□□ 1.15
PNKP-224ENST00000631020 PRRT2Q7Z6L0 340 aaPredicted RBP22.26■■□□□ 1.15
PNKP-224ENST00000631020 IFNL3Q8IZI9 196 aa22.26■■□□□ 1.15
PNKP-224ENST00000631020 TBC1D2Q9BYX2 928 aa22.26■■□□□ 1.15
PNKP-224ENST00000631020 PTPN22Q9Y2R2 807 aa22.26■■□□□ 1.15
PNKP-224ENST00000631020 SIPA1L1O43166 1804 aa22.25■■□□□ 1.15
PNKP-224ENST00000631020 PDHXO00330 501 aa22.25■■□□□ 1.15
PNKP-224ENST00000631020 EVX2Q03828 476 aa22.25■■□□□ 1.15
PNKP-224ENST00000631020 SLC4A8Q2Y0W8 1093 aa22.25■■□□□ 1.15
PNKP-224ENST00000631020 GIMAP6Q6P9H5 292 aa22.25■■□□□ 1.15
PNKP-224ENST00000631020 CASC1Q6TDU7 716 aa22.25■■□□□ 1.15
PNKP-224ENST00000631020 METTL16Q86W50 562 aaKnown RBP22.25■■□□□ 1.15
PNKP-224ENST00000631020 MCM9Q9NXL9 1143 aa22.25■■□□□ 1.15
PNKP-224ENST00000631020 GNRH1P01148 92 aa22.24■■□□□ 1.15
PNKP-224ENST00000631020 SLURP2P0DP57 97 aa22.24■■□□□ 1.15
PNKP-224ENST00000631020 PTH1RQ03431 593 aa22.24■■□□□ 1.15
PNKP-224ENST00000631020 CTR9Q6PD62 1173 aa22.24■■□□□ 1.15
PNKP-224ENST00000631020 SLC45A1Q9Y2W3 748 aa22.24■■□□□ 1.15
PNKP-224ENST00000631020 CYP2D7A0A087X1C5 515 aa22.23■■□□□ 1.15
PNKP-224ENST00000631020 USP17L12C9JPN9 530 aa22.23■■□□□ 1.15
PNKP-224ENST00000631020 USP17L21D6R901 530 aa22.23■■□□□ 1.15
PNKP-224ENST00000631020 SMIM22K7EJ46 135 aa22.23■■□□□ 1.15
PNKP-224ENST00000631020 CYP2D6P10635 497 aa22.23■■□□□ 1.15
PNKP-224ENST00000631020 C17orf99Q6UX52 265 aa22.23■■□□□ 1.15
PNKP-224ENST00000631020 ADGRA2Q96PE1 1338 aa22.23■■□□□ 1.15
PNKP-224ENST00000631020 BAZ2AQ9UIF9 1905 aaKnown RBP22.23■■□□□ 1.15
PNKP-224ENST00000631020 FGAP02671 866 aa22.22■■□□□ 1.15
PNKP-224ENST00000631020 PLCD1P51178 756 aa22.22■■□□□ 1.15
PNKP-224ENST00000631020 SOX10P56693 466 aa22.22■■□□□ 1.15
PNKP-224ENST00000631020 KIF22Q14807 665 aa22.22■■□□□ 1.15
PNKP-224ENST00000631020 ALX1Q15699 326 aa22.22■■□□□ 1.15
PNKP-224ENST00000631020 GPAT2Q6NUI2 795 aa22.22■■□□□ 1.15
PNKP-224ENST00000631020 FOXP4Q8IVH2 680 aaPredicted RBP22.22■■□□□ 1.15
PNKP-224ENST00000631020 PARK7Q99497 189 aaKnown RBP22.22■■□□□ 1.15
PNKP-224ENST00000631020 MYH1P12882 1939 aa22.22■■□□□ 1.15
PNKP-224ENST00000631020 DDX60LQ5H9U9 1706 aaKnown RBP22.22■■□□□ 1.15
PNKP-224ENST00000631020 CAP2P40123 477 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 LACTBP83111 547 aaPredicted RBP22.21■■□□□ 1.15
PNKP-224ENST00000631020 CAP1Q01518 475 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 DSCC1Q9BVC3 393 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 NACAP1Q9BZK3 213 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 LSG1Q9H089 658 aaKnown RBP22.21■■□□□ 1.15
PNKP-224ENST00000631020 NAV1Q8NEY1 1877 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 POLR3DP05423 398 aaPredicted RBP22.21■■□□□ 1.15
PNKP-224ENST00000631020 TDO2P48775 406 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 SBK1Q52WX2 424 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 C12orf60Q5U649 245 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 DDRGK1Q96HY6 314 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 NAPBQ9H115 298 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 GINM1Q9NU53 330 aa22.21■■□□□ 1.15
PNKP-224ENST00000631020 RBBP6Q7Z6E9 1792 aaKnown RBP22.2■■□□□ 1.14
PNKP-224ENST00000631020 FAM196BA6NMK8 535 aa22.2■■□□□ 1.14
PNKP-224ENST00000631020 ARMC5Q96C12 935 aa22.2■■□□□ 1.14
PNKP-224ENST00000631020 LOC285556D6RIA3 1793 aa22.2■■□□□ 1.14
PNKP-224ENST00000631020 CENPFP49454 3210 aa22.19■■□□□ 1.14
PNKP-224ENST00000631020 PRMT2P55345 433 aa22.19■■□□□ 1.14
PNKP-224ENST00000631020 C8orf34Q49A92 452 aa22.19■■□□□ 1.14
PNKP-224ENST00000631020 TTC6Q86TZ1 520 aa22.19■■□□□ 1.14
PNKP-224ENST00000631020 MAP4K1Q92918 833 aa22.19■■□□□ 1.14
PNKP-224ENST00000631020 HLA-DOAP06340 250 aa22.18■■□□□ 1.14
PNKP-224ENST00000631020 KIAA1211Q6ZU35 1233 aa22.18■■□□□ 1.14
PNKP-224ENST00000631020 PROCA1Q8NCQ7 364 aaPredicted RBP22.18■■□□□ 1.14
PNKP-224ENST00000631020 ZNF280CQ8ND82 737 aa22.18■■□□□ 1.14
PNKP-224ENST00000631020 ANO2Q9NQ90 1003 aa22.18■■□□□ 1.14
PNKP-224ENST00000631020 ARPP21Q9UBL0 812 aaPredicted RBP22.18■■□□□ 1.14
PNKP-224ENST00000631020 TNRC18O15417 2968 aaPredicted RBP22.18■■□□□ 1.14
PNKP-224ENST00000631020 TRIM75PA6NK02 468 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms